EDI_280180 | GPI-anchor transamidase precursor, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008233      

  • Computed_GO_Functions:  peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_280180SP0.0087720.9911830.000045CS pos: 14-15. CFG-IE. Pr: 0.4181
No Results

  • Fasta :-

    >EDI_280180 MNIIITLLLCFCFGIEQPQQNQAVVVNLSRYWLNYRHTNSGVLIYNTLKRLGYLDDQLLF FNADDHACHPRNIFPGEMRLNTNMPNIYKDIIIDYKGRDVSIEKYMRAMLGRDVKGTPDS LRLVRGERTFIYLIGHGGEGFMKFQNRDEITSYDIEYMFKEMEIMKRYKEVMFIVDTCQA TSLSDRIKAKNIITVGSSVTGQSSYSGYISNEIGAITSDLWDQHQDVLFQRSLNKESNMT VQDYLNYFNKNMLKSNHGWRSDLFNRPLDQVKMTDFLAYIPQSVDVNLNEIPWSDNIFN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_280180.fa Sequence name : EDI_280180 Sequence length : 299 VALUES OF COMPUTED PARAMETERS Coef20 : 3.892 CoefTot : -1.772 ChDiff : -3 ZoneTo : 54 KR : 4 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.218 1.782 0.246 0.622 MesoH : -0.917 0.107 -0.468 0.144 MuHd_075 : 34.544 22.360 7.828 7.677 MuHd_095 : 24.646 16.818 6.851 5.665 MuHd_100 : 30.868 16.556 7.516 7.096 MuHd_105 : 38.808 19.963 10.113 8.766 Hmax_075 : 8.867 8.400 0.044 3.267 Hmax_095 : 8.500 26.400 2.798 4.250 Hmax_100 : 8.500 24.500 0.229 4.420 Hmax_105 : 11.200 9.300 2.068 4.770 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7108 0.2892 DFMC : 0.8212 0.1788
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 299 EDI_280180 MNIIITLLLCFCFGIEQPQQNQAVVVNLSRYWLNYRHTNSGVLIYNTLKRLGYLDDQLLFFNADDHACHPRNIFPGEMRL 80 NTNMPNIYKDIIIDYKGRDVSIEKYMRAMLGRDVKGTPDSLRLVRGERTFIYLIGHGGEGFMKFQNRDEITSYDIEYMFK 160 EMEIMKRYKEVMFIVDTCQATSLSDRIKAKNIITVGSSVTGQSSYSGYISNEIGAITSDLWDQHQDVLFQRSLNKESNMT 240 VQDYLNYFNKNMLKSNHGWRSDLFNRPLDQVKMTDFLAYIPQSVDVNLNEIPWSDNIFN 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ........................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_280180 30 VVVNLSR|YW 0.089 . EDI_280180 36 RYWLNYR|HT 0.085 . EDI_280180 49 LIYNTLK|RL 0.064 . EDI_280180 50 IYNTLKR|LG 0.105 . EDI_280180 71 DHACHPR|NI 0.171 . EDI_280180 79 IFPGEMR|LN 0.077 . EDI_280180 89 NMPNIYK|DI 0.067 . EDI_280180 96 DIIIDYK|GR 0.062 . EDI_280180 98 IIDYKGR|DV 0.188 . EDI_280180 104 RDVSIEK|YM 0.064 . EDI_280180 107 SIEKYMR|AM 0.069 . EDI_280180 112 MRAMLGR|DV 0.295 . EDI_280180 115 MLGRDVK|GT 0.176 . EDI_280180 122 GTPDSLR|LV 0.116 . EDI_280180 125 DSLRLVR|GE 0.167 . EDI_280180 128 RLVRGER|TF 0.166 . EDI_280180 143 GGEGFMK|FQ 0.073 . EDI_280180 147 FMKFQNR|DE 0.127 . EDI_280180 160 DIEYMFK|EM 0.061 . EDI_280180 166 KEMEIMK|RY 0.063 . EDI_280180 167 EMEIMKR|YK 0.178 . EDI_280180 169 EIMKRYK|EV 0.092 . EDI_280180 186 ATSLSDR|IK 0.104 . EDI_280180 188 SLSDRIK|AK 0.087 . EDI_280180 190 SDRIKAK|NI 0.110 . EDI_280180 231 QDVLFQR|SL 0.147 . EDI_280180 235 FQRSLNK|ES 0.059 . EDI_280180 250 YLNYFNK|NM 0.070 . EDI_280180 254 FNKNMLK|SN 0.085 . EDI_280180 260 KSNHGWR|SD 0.141 . EDI_280180 266 RSDLFNR|PL 0.120 . EDI_280180 272 RPLDQVK|MT 0.064 . ____________________________^_________________

  • Fasta :-

    >EDI_280180 ATGAACATCATCATAACCTTACTTTTGTGTTTTTGTTTTGGTATTGAACAACCACAACAA AACCAAGCCGTTGTAGTTAACTTATCAAGGTATTGGTTAAATTATAGACATACTAATAGT GGAGTATTAATATATAATACATTAAAGAGATTAGGATATTTAGATGACCAATTATTATTT TTTAATGCTGATGATCATGCGTGTCATCCAAGAAATATATTTCCAGGAGAGATGAGATTA AATACAAACATGCCGAATATTTATAAAGATATTATTATTGATTATAAGGGAAGAGATGTT AGTATTGAAAAATATATGAGAGCAATGCTTGGAAGAGATGTTAAAGGAACTCCTGATAGT TTAAGACTTGTAAGAGGAGAAAGGACATTTATTTATTTAATTGGACATGGAGGAGAAGGT TTTATGAAGTTTCAAAATAGAGACGAAATTACATCATATGATATAGAATATATGTTTAAA GAAATGGAAATTATGAAACGATATAAAGAAGTCATGTTCATAGTTGACACTTGTCAAGCT ACAAGTTTAAGTGATAGAATTAAAGCAAAAAATATTATTACAGTTGGAAGTAGTGTAACT GGTCAATCAAGTTATTCTGGTTATATTTCAAATGAAATTGGTGCTATTACTTCAGACCTA TGGGACCAACATCAGGATGTATTATTCCAGCGTTCATTAAACAAAGAAAGTAATATGACT GTTCAAGATTATTTAAATTATTTTAATAAAAATATGCTTAAAAGTAATCATGGATGGAGA AGTGATTTGTTTAATCGTCCATTAGATCAAGTCAAAATGACTGATTTCCTTGCTTATATC CCTCAATCAGTTGATGTTAATTTAAATGAAATACCATGGTCGGATAACATTTTTAATTAA
  • Download Fasta

  • Fasta :-

    MNIIITLLLCFCFGIEQPQQNQAVVVNLSRYWLNYRHTNSGVLIYNTLKRLGYLDDQLLF FNADDHACHPRNIFPGEMRLNTNMPNIYKDIIIDYKGRDVSIEKYMRAMLGRDVKGTPDS LRLVRGERTFIYLIGHGGEGFMKFQNRDEITSYDIEYMFKEMEIMKRYKEVMFIVDTCQA TSLSDRIKAKNIITVGSSVTGQSSYSGYISNEIGAITSDLWDQHQDVLFQRSLNKESNMT VQDYLNYFNKNMLKSNHGWRSDLFNRPLDQVKMTDFLAYIPQSVDVNLNEIPWSDNIFN

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EDI_280180      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India