• Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_284390OTHER0.9924760.0002370.007286
No Results
  • Fasta :-

    >EDI_284390 MDAANILKPMLSRGELRCIGATTIEEYRKYVEKDPAFERRFQQVYVNEPSEEDTLYILRG IREKYENHYGLTITDSALVSAATLSKRYINGRFLPDKAIDLVDEACATLFTQKNSQPEEI DKLERRETQLNVEKIALERDIKESDEDHNKMIKERLQDIEKELSENKEKLTKLRINYEKE KGGSEEMKELATKIEAMKHKAESTKDLEVAADLKYYAIPEAEKRMKELKEQNKETTMISL QVTPTQIEEVVSRWTGIPVTKMNQTEKIRLMKLEEELHKRVIGQNEAVTAVSDAIIRSRG GLGNEKRPT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_284390.fa Sequence name : EDI_284390 Sequence length : 309 VALUES OF COMPUTED PARAMETERS Coef20 : 3.988 CoefTot : 0.000 ChDiff : -6 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.906 0.929 0.072 0.401 MesoH : -1.662 -0.242 -0.635 0.007 MuHd_075 : 25.564 15.011 3.749 6.789 MuHd_095 : 27.725 18.405 8.488 6.616 MuHd_100 : 24.117 16.079 7.665 4.919 MuHd_105 : 15.980 13.139 5.352 2.559 Hmax_075 : 3.500 7.875 -0.082 2.637 Hmax_095 : 7.437 12.600 1.998 4.279 Hmax_100 : 15.200 15.200 3.882 4.850 Hmax_105 : 4.800 9.500 0.866 2.730 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7419 0.2581 DFMC : 0.7740 0.2260
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 309 EDI_284390 MDAANILKPMLSRGELRCIGATTIEEYRKYVEKDPAFERRFQQVYVNEPSEEDTLYILRGIREKYENHYGLTITDSALVS 80 AATLSKRYINGRFLPDKAIDLVDEACATLFTQKNSQPEEIDKLERRETQLNVEKIALERDIKESDEDHNKMIKERLQDIE 160 KELSENKEKLTKLRINYEKEKGGSEEMKELATKIEAMKHKAESTKDLEVAADLKYYAIPEAEKRMKELKEQNKETTMISL 240 QVTPTQIEEVVSRWTGIPVTKMNQTEKIRLMKLEEELHKRVIGQNEAVTAVSDAIIRSRGGLGNEKRPT 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ..................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_284390 8 DAANILK|PM 0.056 . EDI_284390 13 LKPMLSR|GE 0.080 . EDI_284390 17 LSRGELR|CI 0.133 . EDI_284390 28 TTIEEYR|KY 0.081 . EDI_284390 29 TIEEYRK|YV 0.134 . EDI_284390 33 YRKYVEK|DP 0.076 . EDI_284390 39 KDPAFER|RF 0.083 . EDI_284390 40 DPAFERR|FQ 0.200 . EDI_284390 59 DTLYILR|GI 0.080 . EDI_284390 62 YILRGIR|EK 0.128 . EDI_284390 64 LRGIREK|YE 0.075 . EDI_284390 86 SAATLSK|RY 0.063 . EDI_284390 87 AATLSKR|YI 0.157 . EDI_284390 92 KRYINGR|FL 0.120 . EDI_284390 97 GRFLPDK|AI 0.080 . EDI_284390 113 ATLFTQK|NS 0.062 . EDI_284390 122 QPEEIDK|LE 0.058 . EDI_284390 125 EIDKLER|RE 0.067 . EDI_284390 126 IDKLERR|ET 0.113 . EDI_284390 134 TQLNVEK|IA 0.059 . EDI_284390 139 EKIALER|DI 0.105 . EDI_284390 142 ALERDIK|ES 0.109 . EDI_284390 150 SDEDHNK|MI 0.069 . EDI_284390 153 DHNKMIK|ER 0.058 . EDI_284390 155 NKMIKER|LQ 0.102 . EDI_284390 161 RLQDIEK|EL 0.062 . EDI_284390 167 KELSENK|EK 0.056 . EDI_284390 169 LSENKEK|LT 0.066 . EDI_284390 172 NKEKLTK|LR 0.060 . EDI_284390 174 EKLTKLR|IN 0.111 . EDI_284390 179 LRINYEK|EK 0.094 . EDI_284390 181 INYEKEK|GG 0.075 . EDI_284390 188 GGSEEMK|EL 0.100 . EDI_284390 193 MKELATK|IE 0.061 . EDI_284390 198 TKIEAMK|HK 0.069 . EDI_284390 200 IEAMKHK|AE 0.083 . EDI_284390 205 HKAESTK|DL 0.100 . EDI_284390 214 EVAADLK|YY 0.060 . EDI_284390 223 AIPEAEK|RM 0.052 . EDI_284390 224 IPEAEKR|MK 0.233 . EDI_284390 226 EAEKRMK|EL 0.069 . EDI_284390 229 KRMKELK|EQ 0.079 . EDI_284390 233 ELKEQNK|ET 0.065 . EDI_284390 253 IEEVVSR|WT 0.117 . EDI_284390 261 TGIPVTK|MN 0.069 . EDI_284390 267 KMNQTEK|IR 0.065 . EDI_284390 269 NQTEKIR|LM 0.074 . EDI_284390 272 EKIRLMK|LE 0.110 . EDI_284390 279 LEEELHK|RV 0.070 . EDI_284390 280 EEELHKR|VI 0.274 . EDI_284390 297 VSDAIIR|SR 0.116 . EDI_284390 299 DAIIRSR|GG 0.084 . EDI_284390 306 GGLGNEK|RP 0.054 . EDI_284390 307 GLGNEKR|PT 0.225 . ____________________________^_________________
  • Fasta :-

    >EDI_284390 ATGGATGCAGCTAATATTTTAAAACCAATGTTATCAAGAGGAGAATTACGATGTATTGGA GCAACAACAATAGAAGAATATAGAAAATATGTAGAAAAAGATCCAGCATTTGAAAGACGA TTCCAACAAGTTTATGTAAATGAGCCAAGTGAAGAAGATACATTATATATTCTTCGAGGA ATACGAGAGAAATATGAAAATCATTATGGATTAACAATTACCGATTCAGCATTAGTTTCA GCAGCAACATTAAGTAAAAGATATATTAATGGAAGATTTCTTCCAGATAAAGCAATTGAT TTAGTTGATGAAGCATGTGCTACATTATTTACACAAAAGAATTCACAACCAGAAGAAATA GATAAATTAGAAAGAAGAGAAACACAATTAAATGTAGAGAAAATAGCATTAGAAAGAGAC ATTAAAGAAAGTGATGAAGACCATAATAAAATGATTAAAGAAAGACTACAAGATATTGAA AAAGAATTAAGTGAAAATAAAGAGAAATTAACAAAATTACGAATTAACTATGAAAAAGAA AAAGGAGGAAGTGAAGAAATGAAAGAACTTGCAACGAAAATAGAAGCTATGAAACATAAA GCAGAAAGTACTAAAGATTTAGAAGTAGCAGCTGATTTAAAATATTATGCAATACCAGAA GCAGAAAAAAGAATGAAAGAATTAAAGGAACAAAATAAAGAAACAACAATGATATCATTA CAAGTTACACCAACACAAATAGAAGAAGTAGTTAGTAGATGGACAGGAATTCCTGTTACT AAAATGAATCAAACAGAGAAAATAAGACTAATGAAATTAGAAGAAGAACTACATAAACGA GTAATAGGACAAAATGAAGCAGTAACAGCAGTTAGTGATGCAATTATTCGAAGTAGAGGA GGATTAGGAAATGAAAAACGACCAACAGG
  • Download Fasta
  • Fasta :-

    MDAANILKPMLSRGELRCIGATTIEEYRKYVEKDPAFERRFQQVYVNEPSEEDTLYILRG IREKYENHYGLTITDSALVSAATLSKRYINGRFLPDKAIDLVDEACATLFTQKNSQPEEI DKLERRETQLNVEKIALERDIKESDEDHNKMIKERLQDIEKELSENKEKLTKLRINYEKE KGGSEEMKELATKIEAMKHKAESTKDLEVAADLKYYAIPEAEKRMKELKEQNKETTMISL QVTPTQIEEVVSRWTGIPVTKMNQTEKIRLMKLEEELHKRVIGQNEAVTAVSDAIIRSRG GLGNEKRPT

    No Results
IDSitePositionGscoreIscore
EDI_284390T3090.5550.317
IDSitePositionGscoreIscore
EDI_284390T3090.5550.317
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_284390184 SEKGGSEEMK0.993unspEDI_284390184 SEKGGSEEMK0.993unspEDI_284390184 SEKGGSEEMK0.993unspEDI_284390203 SHKAESTKDL0.998unspEDI_28439050 SVNEPSEEDT0.996unspEDI_284390144 SDIKESDEDH0.997unsp

EDI_284390      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India