EDI_288920 | chaperone Clpb, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005524      

  • Computed_GO_Functions:  ATP binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_288920OTHER0.9993090.0001970.000494
No Results

  • Fasta :-

    >EDI_288920 MFLGPSGVGKTELAKALAVELFDDEQNIVRIDMSEYMESHSVSRLIGAPPGYVGYEEGGQ LTEAIRRKPYSVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTIVIMTSNLG SEIIMKGVETEGQVSRKVKETVMEIVKKTFKPEFLNRLDDIIVFSPLSEKELKEIVKIQM GEVIKMIKKRYPLSEVEMTESAIEGIIKSGYSIAYGARPMRRYIEKTVVTSITKSIISGM MKEKNKIQIDYKNDKIQVKITDK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_288920.fa Sequence name : EDI_288920 Sequence length : 263 VALUES OF COMPUTED PARAMETERS Coef20 : 3.532 CoefTot : -0.882 ChDiff : 1 ZoneTo : 11 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.576 1.176 -0.071 0.454 MesoH : -1.286 0.070 -0.544 0.099 MuHd_075 : 19.891 21.049 7.305 6.781 MuHd_095 : 12.677 8.836 2.865 2.996 MuHd_100 : 9.545 8.634 2.949 2.206 MuHd_105 : 8.822 7.711 3.238 1.511 Hmax_075 : 14.600 16.600 3.177 5.980 Hmax_095 : 13.738 11.463 1.458 4.445 Hmax_100 : 12.300 11.300 1.530 4.440 Hmax_105 : 14.583 12.833 2.311 5.040 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9291 0.0709 DFMC : 0.9503 0.0497
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 263 EDI_288920 MFLGPSGVGKTELAKALAVELFDDEQNIVRIDMSEYMESHSVSRLIGAPPGYVGYEEGGQLTEAIRRKPYSVILFDEIEK 80 AHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTIVIMTSNLGSEIIMKGVETEGQVSRKVKETVMEIVKKTFKPEFLNRLDD 160 IIVFSPLSEKELKEIVKIQMGEVIKMIKKRYPLSEVEMTESAIEGIIKSGYSIAYGARPMRRYIEKTVVTSITKSIISGM 240 MKEKNKIQIDYKNDKIQVKITDK 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ....................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_288920 10 GPSGVGK|TE 0.072 . EDI_288920 15 GKTELAK|AL 0.068 . EDI_288920 30 DEQNIVR|ID 0.074 . EDI_288920 44 ESHSVSR|LI 0.117 . EDI_288920 66 QLTEAIR|RK 0.067 . EDI_288920 67 LTEAIRR|KP 0.091 . EDI_288920 68 TEAIRRK|PY 0.137 . EDI_288920 80 LFDEIEK|AH 0.057 . EDI_288920 97 QLLDEGR|LT 0.089 . EDI_288920 102 GRLTDGR|GR 0.081 . EDI_288920 104 LTDGRGR|TV 0.106 . EDI_288920 109 GRTVDFK|NT 0.073 . EDI_288920 126 GSEIIMK|GV 0.107 . EDI_288920 136 TEGQVSR|KV 0.129 . EDI_288920 137 EGQVSRK|VK 0.110 . EDI_288920 139 QVSRKVK|ET 0.204 . EDI_288920 147 TVMEIVK|KT 0.061 . EDI_288920 148 VMEIVKK|TF 0.097 . EDI_288920 151 IVKKTFK|PE 0.057 . EDI_288920 157 KPEFLNR|LD 0.108 . EDI_288920 170 FSPLSEK|EL 0.060 . EDI_288920 173 LSEKELK|EI 0.077 . EDI_288920 177 ELKEIVK|IQ 0.061 . EDI_288920 185 QMGEVIK|MI 0.065 . EDI_288920 188 EVIKMIK|KR 0.055 . EDI_288920 189 VIKMIKK|RY 0.077 . EDI_288920 190 IKMIKKR|YP 0.270 . EDI_288920 208 AIEGIIK|SG 0.071 . EDI_288920 218 SIAYGAR|PM 0.092 . EDI_288920 221 YGARPMR|RY 0.220 . EDI_288920 222 GARPMRR|YI 0.301 . EDI_288920 226 MRRYIEK|TV 0.098 . EDI_288920 234 VVTSITK|SI 0.072 . EDI_288920 242 IISGMMK|EK 0.075 . EDI_288920 244 SGMMKEK|NK 0.068 . EDI_288920 246 MMKEKNK|IQ 0.067 . EDI_288920 252 KIQIDYK|ND 0.062 . EDI_288920 255 IDYKNDK|IQ 0.062 . EDI_288920 259 NDKIQVK|IT 0.077 . EDI_288920 263 QVKITDK|-- 0.062 . ____________________________^_________________

  • Fasta :-

    >EDI_288920 ATGTTTTTAGGACCAAGTGGAGTAGGAAAAACAGAATTAGCAAAAGCATTAGCAGTTGAG TTATTTGATGACGAACAAAATATAGTTAGAATAGATATGAGTGAATATATGGAAAGTCAT AGTGTATCAAGATTAATAGGAGCACCACCAGGATATGTAGGATATGAAGAAGGAGGACAA TTAACAGAGGCAATTCGTAGAAAACCATATAGTGTAATATTATTTGATGAAATTGAAAAA GCACATCCACAAGTATTTAATGTATTATTACAATTATTAGATGAAGGAAGATTAACAGAT GGAAGAGGAAGAACAGTTGATTTTAAGAATACTATTGTTATTATGACATCAAATTTAGGA AGTGAAATAATAATGAAAGGAGTAGAAACAGAAGGACAAGTTAGTAGAAAAGTTAAAGAA ACAGTAATGGAAATAGTAAAGAAAACATTTAAACCAGAGTTTCTTAATAGATTAGATGAT ATTATAGTATTCTCACCACTTTCAGAGAAAGAATTAAAAGAAATAGTTAAAATACAAATG GGAGAAGTGATTAAAATGATTAAAAAGAGATATCCATTAAGTGAGGTAGAAATGACAGAA TCAGCAATAGAAGGAATCATTAAATCAGGATATTCAATAGCATATGGAGCAAGACCAATG CGACGATATATAGAAAAGACAGTAGTAACTTCAATAACAAAATCAATAATAAGTGGAATG ATGAAAGAGAAGAATAAAATTCAAATAGATTATAAAAATGATAAAATTCAAGTCAAAATA ACAGATAAATAA
  • Download Fasta

  • Fasta :-

    MFLGPSGVGKTELAKALAVELFDDEQNIVRIDMSEYMESHSVSRLIGAPPGYVGYEEGGQ LTEAIRRKPYSVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTIVIMTSNLG SEIIMKGVETEGQVSRKVKETVMEIVKKTFKPEFLNRLDDIIVFSPLSEKELKEIVKIQM GEVIKMIKKRYPLSEVEMTESAIEGIIKSGYSIAYGARPMRRYIEKTVVTSITKSIISGM MKEKNKIQIDYKNDKIQVKITDK

    No Results
  • title: ATP binding site
  • coordinates: P5,S6,G7,V8,G9,K10,T11,E12,D76,N118
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_288920135 SEGQVSRKVK0.993unspEDI_288920168 SFSPLSEKEL0.996unsp

EDI_288920      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India