EDI_289450 | hypothetical protein

  • Computed_GO_Component_IDs:  GO:0016020      

  • Computed_GO_Components:  membrane      

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_289450OTHER0.9999970.0000000.000002
No Results

  • Fasta :-

    >EDI_289450 MINTSIDNTPNSIIISNPINNNKPLPYYQISKLFIMCGIVCLEFFFIHVILAILMKGFGF HGYFFQSLICSLIVINLMYYRYSMNKNIITLNTFIQEILKFNKNSFPTLIIALLGLICIL FLRIFLYYCHIDTSDLFTNFYTDGQLDIPIIIDTLFFSVITEEIALRRSMLNTIKIYTQN PKNYLFIISGVWFGLIHFINIGTSSFTVPYVFFQMSYGMIIGYTFSIFTESLGIFPTILL HSMNNALAIINPFVFSPFLLLYATLSALLFIYLSHKLLITHSL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_289450.fa Sequence name : EDI_289450 Sequence length : 283 VALUES OF COMPUTED PARAMETERS Coef20 : 3.813 CoefTot : -4.555 ChDiff : 2 ZoneTo : 131 KR : 8 DE : 3 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.482 2.959 0.599 0.945 MesoH : 1.401 1.277 0.081 0.593 MuHd_075 : 39.353 26.455 11.050 9.271 MuHd_095 : 34.462 28.163 10.648 8.718 MuHd_100 : 34.203 27.429 10.711 8.348 MuHd_105 : 37.683 28.709 12.251 9.626 Hmax_075 : 16.275 17.500 3.959 6.460 Hmax_095 : 13.650 20.300 2.054 7.018 Hmax_100 : 14.400 15.100 1.508 6.360 Hmax_105 : 14.700 19.400 2.402 6.920 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9430 0.0570 DFMC : 0.9138 0.0862
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 283 EDI_289450 MINTSIDNTPNSIIISNPINNNKPLPYYQISKLFIMCGIVCLEFFFIHVILAILMKGFGFHGYFFQSLICSLIVINLMYY 80 RYSMNKNIITLNTFIQEILKFNKNSFPTLIIALLGLICILFLRIFLYYCHIDTSDLFTNFYTDGQLDIPIIIDTLFFSVI 160 TEEIALRRSMLNTIKIYTQNPKNYLFIISGVWFGLIHFINIGTSSFTVPYVFFQMSYGMIIGYTFSIFTESLGIFPTILL 240 HSMNNALAIINPFVFSPFLLLYATLSALLFIYLSHKLLITHSL 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ........................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_289450 23 NPINNNK|PL 0.066 . EDI_289450 32 PYYQISK|LF 0.058 . EDI_289450 56 ILAILMK|GF 0.077 . EDI_289450 81 INLMYYR|YS 0.085 . EDI_289450 86 YRYSMNK|NI 0.067 . EDI_289450 100 FIQEILK|FN 0.065 . EDI_289450 103 EILKFNK|NS 0.061 . EDI_289450 123 ICILFLR|IF 0.069 . EDI_289450 167 TEEIALR|RS 0.067 . EDI_289450 168 EEIALRR|SM 0.137 . EDI_289450 175 SMLNTIK|IY 0.062 . EDI_289450 182 IYTQNPK|NY 0.060 . EDI_289450 276 FIYLSHK|LL 0.060 . ____________________________^_________________

  • Fasta :-

    >EDI_289450 ATGATTAATACTTCTATTGATAATACTCCTAATTCAATTATTATTTCTAATCCTATTAAT AATAACAAACCATTACCTTATTATCAAATATCTAAATTATTTATAATGTGTGGTATTGTT TGTTTAGAATTTTTTTTTATTCATGTTATTTTAGCTATATTAATGAAAGGATTTGGTTTT CATGGTTATTTCTTTCAATCATTAATTTGTTCATTAATTGTCATTAATTTAATGTATTAC AGATATAGTATGAATAAAAATATTATTACTCTTAATACTTTTATTCAAGAAATTCTTAAA TTTAATAAAAATTCATTTCCAACACTTATAATTGCACTATTAGGATTAATTTGTATTTTA TTTCTTCGAATCTTTTTATATTATTGTCATATTGATACTTCTGATTTATTTACTAATTTT TATACTGATGGACAATTAGATATTCCTATTATTATTGATACTCTTTTTTTCTCCGTTATA ACTGAAGAAATAGCATTAAGGAGAAGTATGCTTAATACTATTAAAATTTATACTCAAAAT CCTAAAAACTATCTTTTTATCATATCAGGAGTTTGGTTTGGTTTAATTCATTTCATTAAT ATCGGTACTTCTTCTTTTACTGTCCCTTATGTCTTCTTCCAAATGTCTTATGGCATGATC ATCGGTTATACTTTTAGTATCTTCACTGAATCCCTTGGCATTTTCCCAACTATCCTTCTT CATTCAATGAACAACGCTCTCGCCATTATTAATCCTTTTGTTTTCTCTCCTTTCCTTCTT TTATATGCTACTTTATCCGCTTTATTATTCATTTATTTATCACATAAATTACTGATAACT CATTCTCTTTAA
  • Download Fasta

  • Fasta :-

    MINTSIDNTPNSIIISNPINNNKPLPYYQISKLFIMCGIVCLEFFFIHVILAILMKGFGF HGYFFQSLICSLIVINLMYYRYSMNKNIITLNTFIQEILKFNKNSFPTLIIALLGLICIL FLRIFLYYCHIDTSDLFTNFYTDGQLDIPIIIDTLFFSVITEEIALRRSMLNTIKIYTQN PKNYLFIISGVWFGLIHFINIGTSSFTVPYVFFQMSYGMIIGYTFSIFTESLGIFPTILL HSMNNALAIINPFVFSPFLLLYATLSALLFIYLSHKLLITHSL

    No Results
    No Results
IDSitePositionGscoreIscore
EDI_289450T40.5210.031
IDSitePositionGscoreIscore
EDI_289450T40.5210.031
No Results

EDI_289450      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India