EDI_289460 | 26S protease regulatory subunit S10B, putative

_IDPredictionOTHERSPmTPCS_Position
EDI_289460OTHER0.9999070.0000510.000042
No Results

  • Fasta :-

    >EDI_289460 MEIDGERKSVLKAYLQKLKTYEAKKEALEKIKETLKVSKENMVRNEEMLLSLQAIGMSIG EVLKCLSEEKYIVKVSLGPHYVVGCRNSIDKKKITQGTRVALDVSTNTIMKILPREVHPG VYSMTVESPGKVKYEDIGGLRNQMREIREVIELPMTNPELFERVGVKAPKGVLLYGPPGT GKTLLARALASNLECQFLKVVASGIVDKYLGESARLIREMFAYARDHQPCVIFMDEIDAI AGKRIAEGIHSDREIQRTLMELLAQMDGFNEISKVKIIMATNRPDVLDPALMRPGRLDRK IEISLPNDQGRIEILKIHSKKMNIKGEIDYEAMGKLTEGFNGADLRNVCTEAGMFAIRDD RDYCLEEDFFKAIRKQSDAKKLENQFGDIKI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_289460.fa Sequence name : EDI_289460 Sequence length : 391 VALUES OF COMPUTED PARAMETERS Coef20 : 3.625 CoefTot : 0.000 ChDiff : 4 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.653 1.253 0.011 0.498 MesoH : -0.832 0.332 -0.391 0.181 MuHd_075 : 40.735 17.114 11.837 7.763 MuHd_095 : 9.867 16.790 5.437 4.286 MuHd_100 : 6.607 14.382 4.178 2.768 MuHd_105 : 4.952 8.635 1.861 1.352 Hmax_075 : 11.317 11.433 1.324 4.293 Hmax_095 : 1.100 14.300 0.426 3.560 Hmax_100 : -10.500 7.000 -2.500 1.560 Hmax_105 : -12.600 0.933 -4.858 0.610 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9319 0.0681 DFMC : 0.9527 0.0473
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 391 EDI_289460 MEIDGERKSVLKAYLQKLKTYEAKKEALEKIKETLKVSKENMVRNEEMLLSLQAIGMSIGEVLKCLSEEKYIVKVSLGPH 80 YVVGCRNSIDKKKITQGTRVALDVSTNTIMKILPREVHPGVYSMTVESPGKVKYEDIGGLRNQMREIREVIELPMTNPEL 160 FERVGVKAPKGVLLYGPPGTGKTLLARALASNLECQFLKVVASGIVDKYLGESARLIREMFAYARDHQPCVIFMDEIDAI 240 AGKRIAEGIHSDREIQRTLMELLAQMDGFNEISKVKIIMATNRPDVLDPALMRPGRLDRKIEISLPNDQGRIEILKIHSK 320 KMNIKGEIDYEAMGKLTEGFNGADLRNVCTEAGMFAIRDDRDYCLEEDFFKAIRKQSDAKKLENQFGDIKI 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ....................................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_289460 7 MEIDGER|KS 0.061 . EDI_289460 8 EIDGERK|SV 0.133 . EDI_289460 12 ERKSVLK|AY 0.076 . EDI_289460 17 LKAYLQK|LK 0.062 . EDI_289460 19 AYLQKLK|TY 0.064 . EDI_289460 24 LKTYEAK|KE 0.060 . EDI_289460 25 KTYEAKK|EA 0.102 . EDI_289460 30 KKEALEK|IK 0.066 . EDI_289460 32 EALEKIK|ET 0.061 . EDI_289460 36 KIKETLK|VS 0.053 . EDI_289460 39 ETLKVSK|EN 0.061 . EDI_289460 44 SKENMVR|NE 0.085 . EDI_289460 64 SIGEVLK|CL 0.067 . EDI_289460 70 KCLSEEK|YI 0.061 . EDI_289460 74 EEKYIVK|VS 0.052 . EDI_289460 86 HYVVGCR|NS 0.078 . EDI_289460 91 CRNSIDK|KK 0.077 . EDI_289460 92 RNSIDKK|KI 0.185 . EDI_289460 93 NSIDKKK|IT 0.122 . EDI_289460 99 KITQGTR|VA 0.077 . EDI_289460 111 STNTIMK|IL 0.064 . EDI_289460 115 IMKILPR|EV 0.183 . EDI_289460 131 TVESPGK|VK 0.060 . EDI_289460 133 ESPGKVK|YE 0.070 . EDI_289460 141 EDIGGLR|NQ 0.071 . EDI_289460 145 GLRNQMR|EI 0.147 . EDI_289460 148 NQMREIR|EV 0.353 . EDI_289460 163 NPELFER|VG 0.080 . EDI_289460 167 FERVGVK|AP 0.065 . EDI_289460 170 VGVKAPK|GV 0.075 . EDI_289460 182 GPPGTGK|TL 0.058 . EDI_289460 187 GKTLLAR|AL 0.095 . EDI_289460 199 LECQFLK|VV 0.075 . EDI_289460 208 ASGIVDK|YL 0.087 . EDI_289460 215 YLGESAR|LI 0.106 . EDI_289460 218 ESARLIR|EM 0.247 . EDI_289460 225 EMFAYAR|DH 0.092 . EDI_289460 243 IDAIAGK|RI 0.072 . EDI_289460 244 DAIAGKR|IA 0.215 . EDI_289460 253 EGIHSDR|EI 0.093 . EDI_289460 257 SDREIQR|TL 0.119 . EDI_289460 274 GFNEISK|VK 0.058 . EDI_289460 276 NEISKVK|II 0.064 . EDI_289460 283 IIMATNR|PD 0.073 . EDI_289460 293 LDPALMR|PG 0.072 . EDI_289460 296 ALMRPGR|LD 0.316 . EDI_289460 299 RPGRLDR|KI 0.434 . EDI_289460 300 PGRLDRK|IE 0.067 . EDI_289460 311 LPNDQGR|IE 0.121 . EDI_289460 316 GRIEILK|IH 0.070 . EDI_289460 320 ILKIHSK|KM 0.064 . EDI_289460 321 LKIHSKK|MN 0.197 . EDI_289460 325 SKKMNIK|GE 0.089 . EDI_289460 335 DYEAMGK|LT 0.062 . EDI_289460 346 FNGADLR|NV 0.144 . EDI_289460 358 AGMFAIR|DD 0.097 . EDI_289460 361 FAIRDDR|DY 0.292 . EDI_289460 371 LEEDFFK|AI 0.071 . EDI_289460 374 DFFKAIR|KQ 0.084 . EDI_289460 375 FFKAIRK|QS 0.084 . EDI_289460 380 RKQSDAK|KL 0.084 . EDI_289460 381 KQSDAKK|LE 0.118 . EDI_289460 390 NQFGDIK|I- 0.058 . ____________________________^_________________

  • Fasta :-

    >EDI_289460 ATGGAAATTGATGGAGAAAGAAAAAGTGTATTAAAGGCATATTTACAGAAATTGAAAACA TACGAAGCAAAAAAAGAGGCATTAGAAAAAATAAAAGAGACATTAAAAGTGAGTAAAGAG AATATGGTCAGAAATGAAGAAATGTTATTATCGTTACAAGCTATAGGGATGTCAATTGGA GAAGTATTAAAATGTTTAAGTGAAGAGAAATATATTGTTAAAGTATCACTAGGACCACAT TATGTAGTTGGATGTAGAAATAGTATAGATAAGAAAAAGATAACACAAGGGACACGAGTT GCACTTGATGTATCAACTAATACTATAATGAAAATATTACCAAGAGAAGTTCATCCAGGG GTATATTCGATGACAGTAGAAAGTCCAGGGAAAGTCAAATATGAAGATATTGGAGGATTG AGAAATCAAATGAGAGAAATAAGAGAAGTAATTGAATTACCAATGACAAATCCAGAATTA TTTGAAAGAGTAGGAGTTAAAGCACCAAAAGGAGTATTATTATATGGACCACCAGGAACA GGAAAAACATTACTTGCAAGAGCACTTGCAAGTAATTTAGAATGTCAATTTTTAAAAGTA GTTGCAAGTGGAATTGTAGATAAATATCTTGGAGAAAGTGCAAGATTAATTCGAGAGATG TTTGCATATGCACGAGATCATCAACCATGTGTAATATTTATGGATGAAATAGATGCTATT GCAGGAAAAAGAATTGCAGAAGGAATACATAGTGATAGAGAAATTCAAAGGACATTAATG GAATTATTAGCACAAATGGATGGATTTAATGAAATAAGTAAAGTAAAAATTATTATGGCA ACAAATAGACCAGATGTTTTAGATCCAGCATTAATGAGACCAGGAAGACTTGATAGAAAA ATAGAAATTTCACTTCCAAATGATCAAGGAAGAATTGAAATTTTAAAAATTCATTCTAAA AAGATGAACATTAAAGGAGAAATTGATTATGAAGCAATGGGAAAATTAACAGAAGGATTT AATGGAGCAGATTTAAGAAATGTCTGTACAGAAGCAGGAATGTTTGCAATTAGAGATGAT AGAGATTATTGTCTTGAAGAAGATTTTTTCAAAGCAATAAGAAAACAATCAGATGCAAAG AAATTAGAAAATCAATTTGGTGATATTAAAATTTAA
  • Download Fasta

  • Fasta :-

    MEIDGERKSVLKAYLQKLKTYEAKKEALEKIKETLKVSKENMVRNEEMLLSLQAIGMSIG EVLKCLSEEKYIVKVSLGPHYVVGCRNSIDKKKITQGTRVALDVSTNTIMKILPREVHPG VYSMTVESPGKVKYEDIGGLRNQMREIREVIELPMTNPELFERVGVKAPKGVLLYGPPGT GKTLLARALASNLECQFLKVVASGIVDKYLGESARLIREMFAYARDHQPCVIFMDEIDAI AGKRIAEGIHSDREIQRTLMELLAQMDGFNEISKVKIIMATNRPDVLDPALMRPGRLDRK IEISLPNDQGRIEILKIHSKKMNIKGEIDYEAMGKLTEGFNGADLRNVCTEAGMFAIRDD RDYCLEEDFFKAIRKQSDAKKLENQFGDIKI

  • title: ATP binding site
  • coordinates: P177,P178,G179,T180,G181,K182,T183,L184,D235,N282
No Results
No Results
No Results

EDI_289460      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India