EDI_299030 | hypothetical protein

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_299030OTHER0.9999990.0000010.000000
No Results

  • Fasta :-

    >EDI_299030 MNDNKQEVPLDLEPIIISPSHCYLYGIDGNVQEIINESRSRKICLYSYFPCLIQPICKRS NLKRYLYFFISVTFIITTIELILFFISALFEHEKDSYILILTTNSIKIVGGKNLSLIKCE YQYFRLVLPIFLQNNLLQLIVTTFIQLKFGIIVERILGSSWYFIMYLFCGTMPLFGSYLF AYKLPFIGCSSSLIGIMIIWILQMIIQKEKYHPIVWVQLFISAIFSVLLIIGSCLFTQID GVSIIFSIGTGMLCGLTYFGDNFKSCLTNIFFKWANRLLPIILYLSILTLTIFVIHFVLP VSCHSTQTAS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_299030.fa Sequence name : EDI_299030 Sequence length : 310 VALUES OF COMPUTED PARAMETERS Coef20 : 2.990 CoefTot : -0.134 ChDiff : 5 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.406 2.618 0.578 0.876 MesoH : 1.227 1.472 0.129 0.595 MuHd_075 : 10.028 7.643 1.575 1.634 MuHd_095 : 18.127 15.864 4.664 3.633 MuHd_100 : 17.376 13.078 4.038 2.767 MuHd_105 : 13.881 8.115 2.788 1.408 Hmax_075 : 0.117 6.500 -2.529 2.580 Hmax_095 : 1.400 11.900 -0.869 3.960 Hmax_100 : 6.000 13.400 -0.025 4.260 Hmax_105 : -1.900 8.000 -2.149 2.840 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9880 0.0120 DFMC : 0.9907 0.0093
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 310 EDI_299030 MNDNKQEVPLDLEPIIISPSHCYLYGIDGNVQEIINESRSRKICLYSYFPCLIQPICKRSNLKRYLYFFISVTFIITTIE 80 LILFFISALFEHEKDSYILILTTNSIKIVGGKNLSLIKCEYQYFRLVLPIFLQNNLLQLIVTTFIQLKFGIIVERILGSS 160 WYFIMYLFCGTMPLFGSYLFAYKLPFIGCSSSLIGIMIIWILQMIIQKEKYHPIVWVQLFISAIFSVLLIIGSCLFTQID 240 GVSIIFSIGTGMLCGLTYFGDNFKSCLTNIFFKWANRLLPIILYLSILTLTIFVIHFVLPVSCHSTQTAS 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ...................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_299030 5 --MNDNK|QE 0.055 . EDI_299030 39 EIINESR|SR 0.103 . EDI_299030 41 INESRSR|KI 0.077 . EDI_299030 42 NESRSRK|IC 0.254 . EDI_299030 58 LIQPICK|RS 0.057 . EDI_299030 59 IQPICKR|SN 0.178 . EDI_299030 63 CKRSNLK|RY 0.057 . EDI_299030 64 KRSNLKR|YL 0.336 . EDI_299030 94 ALFEHEK|DS 0.073 . EDI_299030 107 LTTNSIK|IV 0.078 . EDI_299030 112 IKIVGGK|NL 0.067 . EDI_299030 118 KNLSLIK|CE 0.058 . EDI_299030 125 CEYQYFR|LV 0.115 . EDI_299030 148 TTFIQLK|FG 0.072 . EDI_299030 155 FGIIVER|IL 0.094 . EDI_299030 183 SYLFAYK|LP 0.057 . EDI_299030 208 LQMIIQK|EK 0.060 . EDI_299030 210 MIIQKEK|YH 0.067 . EDI_299030 264 YFGDNFK|SC 0.069 . EDI_299030 273 LTNIFFK|WA 0.082 . EDI_299030 277 FFKWANR|LL 0.075 . ____________________________^_________________

  • Fasta :-

    >EDI_299030 ATGAATGATAACAAACAAGAAGTACCACTTGATTTGGAGCCAATAATTATTTCACCATCT CATTGTTATTTATATGGGATTGATGGAAATGTACAAGAAATAATTAATGAAAGTAGAAGT AGAAAAATATGTTTATATTCTTATTTTCCATGTCTTATTCAACCGATTTGTAAAAGATCC AATTTAAAACGATATTTATATTTTTTTATTTCAGTAACATTTATAATAACAACAATTGAA TTAATATTGTTTTTTATTAGTGCATTGTTTGAACATGAAAAAGATTCTTATATTTTAATT CTAACTACTAATTCAATTAAAATTGTTGGAGGAAAGAATTTATCATTAATTAAATGTGAG TACCAATACTTTAGATTAGTACTTCCTATTTTTTTACAAAACAATCTTCTTCAATTAATT GTCACAACTTTTATTCAATTGAAATTTGGAATTATTGTAGAAAGAATATTGGGAAGTTCA TGGTACTTTATTATGTATTTATTTTGTGGAACAATGCCATTATTTGGGAGTTATTTATTT GCTTACAAATTACCATTTATTGGTTGTTCTTCTTCTTTAATAGGAATAATGATAATTTGG ATTTTACAAATGATCATTCAAAAAGAGAAATACCATCCAATTGTTTGGGTTCAACTCTTT ATTTCAGCTATTTTTAGTGTATTATTAATTATTGGTAGTTGTTTATTTACACAAATTGAT GGTGTTTCAATTATATTTTCTATTGGAACAGGGATGTTATGTGGACTAACATATTTTGGC GATAATTTTAAATCTTGTTTAACAAATATCTTCTTTAAATGGGCAAATAGACTTCTCCCT ATTATATTGTATTTGTCAATACTTACGCTCACAATTTTTGTTATTCATTTTGTTTTACCA GTGTCATGTCATTCTACTCAAACCGCTTCTTAA
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  • Fasta :-

    MNDNKQEVPLDLEPIIISPSHCYLYGIDGNVQEIINESRSRKICLYSYFPCLIQPICKRS NLKRYLYFFISVTFIITTIELILFFISALFEHEKDSYILILTTNSIKIVGGKNLSLIKCE YQYFRLVLPIFLQNNLLQLIVTTFIQLKFGIIVERILGSSWYFIMYLFCGTMPLFGSYLF AYKLPFIGCSSSLIGIMIIWILQMIIQKEKYHPIVWVQLFISAIFSVLLIIGSCLFTQID GVSIIFSIGTGMLCGLTYFGDNFKSCLTNIFFKWANRLLPIILYLSILTLTIFVIHFVLP VSCHSTQTAS

    No Results
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
EDI_299030T3080.5430.033EDI_299030T3060.5060.038EDI_299030S3100.5060.014
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
EDI_299030T3080.5430.033EDI_299030T3060.5060.038EDI_299030S3100.5060.014
No Results

EDI_299030      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India