EDI_300760 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_300760OTHER0.9999710.0000080.000021
No Results

  • Fasta :-

    >EDI_300760 MFLVSFNEITKYCQECIKNISFLSTVQLIIIWGVYFILPELEIEPKGFSPLKSRGDFIHQ VGPMLYHCFIHEGILHLFGNSISLFVFGALVEKQIGTTRIIILFILSIILQPILMISLFS LKLASGNSVVGMSGYIFTLIIIFYYQPGKYMDVIYCCILNIISYIFCLLLLAQVSLSGHF CGIIIGVLYTRGFLDWLFNSRLITIIDTVIKRFIGCLIIYIPIPENSINTQSHLQIMSLI KSDIKSLISHCSRHSNDANTLNSLPI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_300760.fa Sequence name : EDI_300760 Sequence length : 266 VALUES OF COMPUTED PARAMETERS Coef20 : 3.955 CoefTot : 0.100 ChDiff : 2 ZoneTo : 7 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.318 2.941 0.625 0.972 MesoH : 1.230 1.631 0.203 0.617 MuHd_075 : 4.767 6.368 1.358 1.945 MuHd_095 : 41.145 24.576 13.988 7.356 MuHd_100 : 44.857 26.702 15.630 8.140 MuHd_105 : 42.589 26.036 15.729 7.684 Hmax_075 : 1.400 12.100 -0.346 3.050 Hmax_095 : 18.900 18.113 5.622 5.460 Hmax_100 : 19.600 20.200 6.325 6.540 Hmax_105 : 20.183 22.050 7.070 6.393 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8786 0.1214 DFMC : 0.9455 0.0545
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 266 EDI_300760 MFLVSFNEITKYCQECIKNISFLSTVQLIIIWGVYFILPELEIEPKGFSPLKSRGDFIHQVGPMLYHCFIHEGILHLFGN 80 SISLFVFGALVEKQIGTTRIIILFILSIILQPILMISLFSLKLASGNSVVGMSGYIFTLIIIFYYQPGKYMDVIYCCILN 160 IISYIFCLLLLAQVSLSGHFCGIIIGVLYTRGFLDWLFNSRLITIIDTVIKRFIGCLIIYIPIPENSINTQSHLQIMSLI 240 KSDIKSLISHCSRHSNDANTLNSLPI 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .......................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_300760 11 SFNEITK|YC 0.067 . EDI_300760 18 YCQECIK|NI 0.060 . EDI_300760 46 ELEIEPK|GF 0.066 . EDI_300760 52 KGFSPLK|SR 0.110 . EDI_300760 54 FSPLKSR|GD 0.099 . EDI_300760 93 FGALVEK|QI 0.074 . EDI_300760 99 KQIGTTR|II 0.083 . EDI_300760 122 ISLFSLK|LA 0.061 . EDI_300760 149 FYYQPGK|YM 0.071 . EDI_300760 191 IGVLYTR|GF 0.087 . EDI_300760 201 DWLFNSR|LI 0.078 . EDI_300760 211 IIDTVIK|RF 0.059 . EDI_300760 212 IDTVIKR|FI 0.224 . EDI_300760 241 QIMSLIK|SD 0.088 . EDI_300760 245 LIKSDIK|SL 0.068 . EDI_300760 253 LISHCSR|HS 0.112 . ____________________________^_________________

  • Fasta :-

    >EDI_300760 ATGTTTTTAGTGAGTTTTAATGAAATTACTAAATATTGTCAAGAATGCATTAAAAACATT TCATTCTTAAGTACTGTTCAACTAATAATTATTTGGGGTGTATATTTTATACTTCCTGAA CTAGAGATTGAACCAAAAGGATTTTCTCCTTTAAAATCTCGAGGTGATTTTATACATCAA GTTGGGCCAATGTTGTATCATTGTTTTATTCATGAAGGAATATTACACTTATTTGGGAAT TCAATTTCATTATTTGTTTTTGGGGCGTTAGTAGAAAAACAAATTGGGACAACACGAATT ATTATATTATTCATTTTATCAATAATACTTCAACCAATATTAATGATTTCTTTATTCTCA TTAAAACTTGCTTCAGGTAATTCTGTTGTTGGCATGAGTGGATATATATTTACGTTAATT ATTATATTTTATTATCAACCAGGAAAATATATGGATGTTATTTATTGTTGTATTTTAAAT ATCATTAGTTATATTTTTTGTTTATTGTTATTAGCTCAAGTAAGTTTATCTGGTCATTTT TGTGGAATTATTATAGGAGTTTTATATACAAGAGGATTCCTGGATTGGTTATTTAATTCT CGTCTAATTACAATTATTGATACTGTGATTAAGAGGTTCATTGGTTGTTTAATAATTTAT ATACCGATTCCAGAAAATTCTATTAATACACAATCTCATTTACAGATTATGTCATTAATC AAATCAGACATTAAATCATTAATATCTCATTGTTCTCGACACTCAAATGATGCAAATACT CTTAATTCATTACCTATTTGA
  • Download Fasta

  • Fasta :-

    MFLVSFNEITKYCQECIKNISFLSTVQLIIIWGVYFILPELEIEPKGFSPLKSRGDFIHQ VGPMLYHCFIHEGILHLFGNSISLFVFGALVEKQIGTTRIIILFILSIILQPILMISLFS LKLASGNSVVGMSGYIFTLIIIFYYQPGKYMDVIYCCILNIISYIFCLLLLAQVSLSGHF CGIIIGVLYTRGFLDWLFNSRLITIIDTVIKRFIGCLIIYIPIPENSINTQSHLQIMSLI KSDIKSLISHCSRHSNDANTLNSLPI

    No Results
No Results
No Results
No Results

EDI_300760      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India