EDI_313240 | ubiquitin carboxyl-terminal hydrolase, putative

_IDPredictionOTHERSPmTPCS_Position
EDI_313240OTHER0.9976700.0002080.002122
No Results

  • Fasta :-

    >EDI_313240 MSFLNFFNSPKIKGTNGIHNLGNTCYMNAVIQCIAHTQQFLEYALEYQLKVYTNENNTKS SLIENVTESLIKTIQALYTHKESIYPQYFFTTFGILNQQFADKKQKDAAEFLLLLLDVMD NDLRGTSITQPPAIIHNELYYKDYIEYIRNNKSIITQMTTGMVVSKFCCEICGTSSIHSE PFSLLQLPIMKNLSFLKKVNLENYFELKELKYITIYDCLIGYLYSFQTCVKCNHTQIPNR NFVVTPPILIIQILRFEQQSNNTQKDQTTVFFPLNDFVIGIAKYQLYATIDHIGSINQGH FTANCKINDLWYRFDDETVKPLNKIDIVSDKSYILFYERT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_313240.fa Sequence name : EDI_313240 Sequence length : 340 VALUES OF COMPUTED PARAMETERS Coef20 : 3.473 CoefTot : -2.261 ChDiff : -2 ZoneTo : 41 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.106 1.218 0.224 0.485 MesoH : -0.374 0.406 -0.309 0.231 MuHd_075 : 19.643 23.236 8.646 6.131 MuHd_095 : 24.540 20.585 10.606 6.588 MuHd_100 : 23.664 19.502 10.487 5.578 MuHd_105 : 25.039 21.111 10.486 5.629 Hmax_075 : 15.983 21.700 5.431 5.985 Hmax_095 : 14.088 12.862 5.345 5.014 Hmax_100 : 12.700 15.800 3.904 6.080 Hmax_105 : 9.000 7.583 2.104 5.680 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6927 0.3073 DFMC : 0.6806 0.3194
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 340 EDI_313240 MSFLNFFNSPKIKGTNGIHNLGNTCYMNAVIQCIAHTQQFLEYALEYQLKVYTNENNTKSSLIENVTESLIKTIQALYTH 80 KESIYPQYFFTTFGILNQQFADKKQKDAAEFLLLLLDVMDNDLRGTSITQPPAIIHNELYYKDYIEYIRNNKSIITQMTT 160 GMVVSKFCCEICGTSSIHSEPFSLLQLPIMKNLSFLKKVNLENYFELKELKYITIYDCLIGYLYSFQTCVKCNHTQIPNR 240 NFVVTPPILIIQILRFEQQSNNTQKDQTTVFFPLNDFVIGIAKYQLYATIDHIGSINQGHFTANCKINDLWYRFDDETVK 320 PLNKIDIVSDKSYILFYERT 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_313240 11 NFFNSPK|IK 0.072 . EDI_313240 13 FNSPKIK|GT 0.095 . EDI_313240 50 ALEYQLK|VY 0.066 . EDI_313240 59 TNENNTK|SS 0.089 . EDI_313240 72 VTESLIK|TI 0.061 . EDI_313240 81 QALYTHK|ES 0.057 . EDI_313240 103 NQQFADK|KQ 0.062 . EDI_313240 104 QQFADKK|QK 0.118 . EDI_313240 106 FADKKQK|DA 0.081 . EDI_313240 124 VMDNDLR|GT 0.085 . EDI_313240 142 HNELYYK|DY 0.073 . EDI_313240 149 DYIEYIR|NN 0.081 . EDI_313240 152 EYIRNNK|SI 0.224 . EDI_313240 166 TGMVVSK|FC 0.088 . EDI_313240 191 LQLPIMK|NL 0.059 . EDI_313240 197 KNLSFLK|KV 0.065 . EDI_313240 198 NLSFLKK|VN 0.101 . EDI_313240 208 ENYFELK|EL 0.060 . EDI_313240 211 FELKELK|YI 0.062 . EDI_313240 231 SFQTCVK|CN 0.072 . EDI_313240 240 HTQIPNR|NF 0.083 . EDI_313240 255 LIIQILR|FE 0.092 . EDI_313240 265 QSNNTQK|DQ 0.099 . EDI_313240 283 FVIGIAK|YQ 0.058 . EDI_313240 306 HFTANCK|IN 0.056 . EDI_313240 313 INDLWYR|FD 0.095 . EDI_313240 320 FDDETVK|PL 0.060 . EDI_313240 324 TVKPLNK|ID 0.059 . EDI_313240 331 IDIVSDK|SY 0.076 . EDI_313240 339 YILFYER|T- 0.071 . ____________________________^_________________

  • Fasta :-

    >EDI_313240 ATGTCATTTCTAAACTTCTTTAACTCACCAAAAATTAAAGGAACAAATGGGATTCATAAT TTAGGTAATACATGTTATATGAATGCTGTAATACAGTGCATTGCACATACCCAACAATTT TTAGAATATGCATTAGAATATCAGTTAAAAGTTTATACGAATGAAAATAATACAAAAAGT TCATTAATAGAAAATGTTACCGAGTCTTTAATAAAAACAATCCAAGCATTATATACTCAT AAAGAATCAATTTACCCTCAATATTTTTTTACTACTTTTGGTATTCTCAACCAACAATTT GCTGATAAAAAACAAAAAGATGCTGCAGAATTTTTGTTATTATTACTTGATGTTATGGAT AATGATCTTCGAGGTACAAGTATAACTCAACCACCAGCTATAATACATAATGAATTGTAT TATAAAGATTATATTGAATATATTAGAAATAATAAATCAATTATTACTCAAATGACAACT GGGATGGTTGTAAGTAAATTTTGTTGTGAAATTTGTGGAACATCTTCAATTCATTCTGAA CCATTTTCATTATTACAATTGCCAATTATGAAAAATCTTTCATTTTTAAAAAAAGTTAAT TTAGAAAATTATTTTGAATTAAAAGAATTAAAATATATAACAATTTATGACTGTTTAATT GGTTATTTATATTCTTTTCAAACTTGTGTTAAATGTAATCATACACAAATTCCTAATAGA AATTTCGTTGTAACACCTCCTATTCTTATTATTCAAATTCTTCGATTTGAACAACAATCA AATAATACTCAAAAAGATCAAACTACTGTTTTTTTCCCTTTAAATGACTTTGTTATTGGA ATAGCAAAATATCAATTGTATGCAACTATTGATCATATAGGCTCAATTAATCAAGGTCAT TTTACTGCTAATTGTAAAATAAATGATTTATGGTATCGTTTTGATGATGAAACAGTAAAA CCTCTTAATAAAATAGATATTGTTTCAGACAAATCATATATACTGTTTTATGAAAGAACT TAA
  • Download Fasta

  • Fasta :-

    MSFLNFFNSPKIKGTNGIHNLGNTCYMNAVIQCIAHTQQFLEYALEYQLKVYTNENNTKS SLIENVTESLIKTIQALYTHKESIYPQYFFTTFGILNQQFADKKQKDAAEFLLLLLDVMD NDLRGTSITQPPAIIHNELYYKDYIEYIRNNKSIITQMTTGMVVSKFCCEICGTSSIHSE PFSLLQLPIMKNLSFLKKVNLENYFELKELKYITIYDCLIGYLYSFQTCVKCNHTQIPNR NFVVTPPILIIQILRFEQQSNNTQKDQTTVFFPLNDFVIGIAKYQLYATIDHIGSINQGH FTANCKINDLWYRFDDETVKPLNKIDIVSDKSYILFYERT

  • title: Active Site
  • coordinates: N20,C25,H300,D316
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EDI_313240      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India