EDI_315330 | cathepsin W precursor, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_315330SP0.0154490.9842090.000342CS pos: 15-16. VDT-SS. Pr: 0.3949
No Results

  • Fasta :-

    >EDI_315330 MILFILISVVLGVDTSSMRKLCAKKRYVSAFKIFKESFSKKYLSQSEEIRRMAIFSQRVE MIEKFNAQRKIESDVKLDINNFTDLTNDEFIQMYIGGKKKSENSKDQNIVNNNRYIPQKV NYPTMYSLCGKNTNYNSETDGKIDHCSLGVDQKLCRCCYAASIANFLQIKHHIANGENVQ YSIQQIVDCTGGKTKGCCSGMSYDALNYNRVFATNDVYPFRDAETSPDCQSYTRPSCYTV KEFAQTLTSYKEWYAPTYNEIKQIIYDNKGAISGIYVPLSGVVSEVWQSYSSGIINVSSY CSSNNGNIFTNHMVVLVGFGFEAQGEGVNGNFIIIRNSWGTDWGDKGTAKLSTDSLCGIG NCDGETVPCSHPTIITFETKVGPSTEQDYGCLQDKCSPTNDCDGVNCLTKSLDPPPNHSV GIVIIMLVICLMGLF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_315330.fa Sequence name : EDI_315330 Sequence length : 435 VALUES OF COMPUTED PARAMETERS Coef20 : 4.742 CoefTot : 0.278 ChDiff : -2 ZoneTo : 35 KR : 7 DE : 1 CleavSite : 28 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.571 2.912 0.625 0.926 MesoH : 0.143 0.419 -0.208 0.334 MuHd_075 : 39.133 20.809 12.032 7.654 MuHd_095 : 20.593 18.150 8.719 5.634 MuHd_100 : 13.962 14.426 5.349 4.736 MuHd_105 : 21.561 12.608 4.561 6.182 Hmax_075 : 11.900 12.500 3.584 3.830 Hmax_095 : -5.100 18.375 -1.421 5.101 Hmax_100 : 7.500 23.900 2.577 4.730 Hmax_105 : 1.100 9.333 3.484 2.753 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6670 0.3330 DFMC : 0.8198 0.1802
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 435 EDI_315330 MILFILISVVLGVDTSSMRKLCAKKRYVSAFKIFKESFSKKYLSQSEEIRRMAIFSQRVEMIEKFNAQRKIESDVKLDIN 80 NFTDLTNDEFIQMYIGGKKKSENSKDQNIVNNNRYIPQKVNYPTMYSLCGKNTNYNSETDGKIDHCSLGVDQKLCRCCYA 160 ASIANFLQIKHHIANGENVQYSIQQIVDCTGGKTKGCCSGMSYDALNYNRVFATNDVYPFRDAETSPDCQSYTRPSCYTV 240 KEFAQTLTSYKEWYAPTYNEIKQIIYDNKGAISGIYVPLSGVVSEVWQSYSSGIINVSSYCSSNNGNIFTNHMVVLVGFG 320 FEAQGEGVNGNFIIIRNSWGTDWGDKGTAKLSTDSLCGIGNCDGETVPCSHPTIITFETKVGPSTEQDYGCLQDKCSPTN 400 DCDGVNCLTKSLDPPPNHSVGIVIIMLVICLMGLF 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_315330 19 VDTSSMR|KL 0.086 . EDI_315330 20 DTSSMRK|LC 0.075 . EDI_315330 24 MRKLCAK|KR 0.067 . EDI_315330 25 RKLCAKK|RY 0.088 . EDI_315330 26 KLCAKKR|YV 0.387 . EDI_315330 32 RYVSAFK|IF 0.058 . EDI_315330 35 SAFKIFK|ES 0.060 . EDI_315330 40 FKESFSK|KY 0.056 . EDI_315330 41 KESFSKK|YL 0.329 . EDI_315330 50 SQSEEIR|RM 0.076 . EDI_315330 51 QSEEIRR|MA 0.165 . EDI_315330 58 MAIFSQR|VE 0.081 . EDI_315330 64 RVEMIEK|FN 0.060 . EDI_315330 69 EKFNAQR|KI 0.084 . EDI_315330 70 KFNAQRK|IE 0.105 . EDI_315330 76 KIESDVK|LD 0.057 . EDI_315330 98 QMYIGGK|KK 0.060 . EDI_315330 99 MYIGGKK|KS 0.090 . EDI_315330 100 YIGGKKK|SE 0.132 . EDI_315330 105 KKSENSK|DQ 0.086 . EDI_315330 114 NIVNNNR|YI 0.097 . EDI_315330 119 NRYIPQK|VN 0.071 . EDI_315330 131 MYSLCGK|NT 0.066 . EDI_315330 142 NSETDGK|ID 0.063 . EDI_315330 153 SLGVDQK|LC 0.062 . EDI_315330 156 VDQKLCR|CC 0.087 . EDI_315330 170 ANFLQIK|HH 0.067 . EDI_315330 193 VDCTGGK|TK 0.062 . EDI_315330 195 CTGGKTK|GC 0.071 . EDI_315330 210 DALNYNR|VF 0.067 . EDI_315330 221 NDVYPFR|DA 0.181 . EDI_315330 234 DCQSYTR|PS 0.077 . EDI_315330 241 PSCYTVK|EF 0.068 . EDI_315330 251 QTLTSYK|EW 0.059 . EDI_315330 262 PTYNEIK|QI 0.064 . EDI_315330 269 QIIYDNK|GA 0.077 . EDI_315330 336 GNFIIIR|NS 0.084 . EDI_315330 346 GTDWGDK|GT 0.059 . EDI_315330 350 GDKGTAK|LS 0.075 . EDI_315330 380 IITFETK|VG 0.057 . EDI_315330 395 YGCLQDK|CS 0.062 . EDI_315330 410 GVNCLTK|SL 0.098 . ____________________________^_________________

  • Fasta :-

    >EDI_315330 ATGATTTTATTTATTCTTATTAGCGTGGTTCTTGGTGTTGATACAAGTTCAATGAGAAAA TTATGTGCAAAGAAACGATATGTTTCTGCTTTTAAGATATTTAAAGAAAGTTTCAGTAAA AAGTATTTAAGTCAATCCGAAGAAATAAGAAGAATGGCAATTTTTTCTCAACGAGTTGAA ATGATAGAAAAATTTAATGCTCAAAGGAAAATAGAGAGTGATGTCAAACTTGATATCAAT AATTTTACTGATCTTACAAATGATGAATTTATTCAAATGTATATTGGTGGAAAAAAAAAG AGTGAAAATAGTAAAGATCAAAACATTGTTAATAACAATAGGTATATTCCTCAAAAAGTT AACTATCCTACAATGTATTCTTTGTGTGGTAAAAATACTAATTATAATTCAGAGACTGAT GGTAAAATCGACCACTGTAGCCTTGGTGTTGATCAAAAACTTTGTCGTTGTTGTTACGCC GCGTCAATAGCTAATTTTCTTCAAATAAAACACCATATTGCTAATGGTGAAAATGTTCAA TATTCTATACAGCAAATTGTTGATTGTACTGGCGGTAAAACTAAAGGATGTTGTAGTGGA ATGTCATATGATGCATTAAACTATAATAGGGTATTTGCTACAAATGACGTTTATCCATTT AGAGATGCTGAAACCTCTCCAGATTGTCAATCATATACAAGACCAAGTTGTTATACTGTT AAAGAATTTGCTCAGACACTCACCTCATATAAGGAATGGTATGCACCAACATACAATGAA ATAAAACAAATTATCTATGATAATAAAGGTGCTATTAGTGGAATATATGTCCCTCTTAGT GGAGTTGTGTCTGAAGTATGGCAAAGTTATTCTAGTGGTATAATAAATGTAAGTTCATAT TGTAGTTCTAACAATGGTAATATTTTCACTAATCATATGGTTGTACTTGTTGGATTTGGT TTTGAAGCACAAGGAGAAGGGGTTAATGGTAATTTCATTATTATTAGAAATTCTTGGGGA ACTGATTGGGGAGACAAAGGTACTGCTAAGTTATCTACTGACAGTTTATGTGGAATAGGA AATTGTGATGGTGAGACTGTTCCATGTTCTCATCCAACAATTATCACATTTGAAACTAAA GTAGGTCCATCTACTGAACAAGACTATGGATGTTTACAAGATAAATGCTCCCCAACAAAT GACTGTGATGGAGTTAACTGTTTAACTAAAAGTTTAGATCCACCACCTAATCATTCTGTT GGAATTGTTATTATCATGTTGGTAATATGTCTTATGGGGCTTTTCTAA
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  • Fasta :-

    MILFILISVVLGVDTSSMRKLCAKKRYVSAFKIFKESFSKKYLSQSEEIRRMAIFSQRVE MIEKFNAQRKIESDVKLDINNFTDLTNDEFIQMYIGGKKKSENSKDQNIVNNNRYIPQKV NYPTMYSLCGKNTNYNSETDGKIDHCSLGVDQKLCRCCYAASIANFLQIKHHIANGENVQ YSIQQIVDCTGGKTKGCCSGMSYDALNYNRVFATNDVYPFRDAETSPDCQSYTRPSCYTV KEFAQTLTSYKEWYAPTYNEIKQIIYDNKGAISGIYVPLSGVVSEVWQSYSSGIINVSSY CSSNNGNIFTNHMVVLVGFGFEAQGEGVNGNFIIIRNSWGTDWGDKGTAKLSTDSLCGIG NCDGETVPCSHPTIITFETKVGPSTEQDYGCLQDKCSPTNDCDGVNCLTKSLDPPPNHSV GIVIIMLVICLMGLF

  • title: active site
  • coordinates: Q152,C158,H312,N337
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_315330384 SKVGPSTEQD0.994unspEDI_315330384 SKVGPSTEQD0.994unspEDI_315330384 SKVGPSTEQD0.994unspEDI_31533044 SKKYLSQSEE0.996unspEDI_315330249 SQTLTSYKEW0.996unsp

EDI_315330      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India