EDI_326260 | proteasome subunit beta type-3, putative

_IDPredictionOTHERSPmTPCS_Position
EDI_326260OTHER0.9981980.0016930.000109
No Results

  • Fasta :-

    >EDI_326260 MGDDITYYSGGAVVGMAGKGCVAIAADNRYGLKYQFASANFHKVFQVNKYCLFGGAGLFS DVQTMAEKVKYHANLYRLREGHDIGPEQLLNSTAHMLYKKRFQPYYMSPIIAGIDDNGNS YVCSYDYIGSPEISRVGCVGTGSNELMGMCDSFYKEGMEPEELVEAVGQCLLAAENRDAF SGWGVEVYLLTRDNLTIYNMKPRQD
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_326260.fa Sequence name : EDI_326260 Sequence length : 205 VALUES OF COMPUTED PARAMETERS Coef20 : 2.824 CoefTot : -0.250 ChDiff : -6 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.206 1.447 0.248 0.566 MesoH : -0.591 0.132 -0.344 0.195 MuHd_075 : 20.629 5.937 3.959 1.975 MuHd_095 : 22.263 16.602 4.970 3.161 MuHd_100 : 19.493 12.180 3.996 2.135 MuHd_105 : 15.247 5.775 3.226 1.893 Hmax_075 : 14.350 10.617 2.409 4.725 Hmax_095 : 15.138 13.038 2.448 4.655 Hmax_100 : 15.700 13.100 2.272 4.700 Hmax_105 : 13.500 10.500 2.053 4.013 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9837 0.0163 DFMC : 0.9869 0.0131
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 205 EDI_326260 MGDDITYYSGGAVVGMAGKGCVAIAADNRYGLKYQFASANFHKVFQVNKYCLFGGAGLFSDVQTMAEKVKYHANLYRLRE 80 GHDIGPEQLLNSTAHMLYKKRFQPYYMSPIIAGIDDNGNSYVCSYDYIGSPEISRVGCVGTGSNELMGMCDSFYKEGMEP 160 EELVEAVGQCLLAAENRDAFSGWGVEVYLLTRDNLTIYNMKPRQD 240 ................................................................................ 80 ................................................................................ 160 ............................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_326260 19 VVGMAGK|GC 0.060 . EDI_326260 29 AIAADNR|YG 0.086 . EDI_326260 33 DNRYGLK|YQ 0.066 . EDI_326260 43 ASANFHK|VF 0.067 . EDI_326260 49 KVFQVNK|YC 0.067 . EDI_326260 68 VQTMAEK|VK 0.056 . EDI_326260 70 TMAEKVK|YH 0.067 . EDI_326260 77 YHANLYR|LR 0.091 . EDI_326260 79 ANLYRLR|EG 0.093 . EDI_326260 99 TAHMLYK|KR 0.070 . EDI_326260 100 AHMLYKK|RF 0.091 . EDI_326260 101 HMLYKKR|FQ 0.151 . EDI_326260 135 GSPEISR|VG 0.073 . EDI_326260 155 MCDSFYK|EG 0.058 . EDI_326260 177 LLAAENR|DA 0.156 . EDI_326260 192 EVYLLTR|DN 0.086 . EDI_326260 201 LTIYNMK|PR 0.062 . EDI_326260 203 IYNMKPR|QD 0.117 . ____________________________^_________________

  • Fasta :-

    >EDI_326260 ATGGGAGATGATATTACATATTATAGTGGAGGAGCTGTTGTTGGAATGGCGGGGAAAGGA TGTGTTGCAATTGCCGCAGATAATCGATATGGATTAAAATATCAATTTGCTTCCGCTAAT TTTCATAAAGTATTTCAAGTAAATAAATATTGTTTATTTGGAGGAGCAGGATTATTTTCT GATGTACAAACAATGGCTGAAAAAGTAAAATATCATGCAAATTTATATCGGTTAAGAGAA GGACATGACATTGGACCAGAACAATTATTAAATTCAACTGCTCATATGTTATATAAAAAA AGATTCCAGCCATATTATATGTCACCTATCATTGCTGGTATTGATGATAATGGAAATTCT TATGTGTGCAGTTATGATTATATTGGTTCTCCTGAAATTTCACGAGTTGGTTGTGTTGGT ACCGGAAGTAATGAACTAATGGGAATGTGTGATTCTTTCTATAAAGAAGGCATGGAACCT GAAGAGTTAGTAGAAGCTGTTGGTCAATGTCTTCTTGCAGCAGAAAATAGAGATGCATTT TCTGGATGGGGTGTAGAAGTTTATTTATTGACTCGTGATAATTTGACAATTTACAATATG AAACCAAGACAAGACTAA
  • Download Fasta

  • Fasta :-

    MGDDITYYSGGAVVGMAGKGCVAIAADNRYGLKYQFASANFHKVFQVNKYCLFGGAGLFS DVQTMAEKVKYHANLYRLREGHDIGPEQLLNSTAHMLYKKRFQPYYMSPIIAGIDDNGNS YVCSYDYIGSPEISRVGCVGTGSNELMGMCDSFYKEGMEPEELVEAVGQCLLAAENRDAF SGWGVEVYLLTRDNLTIYNMKPRQD

  • title: active site
  • coordinates: G11,D27,R29,K43,T141,D178,S181,G182
No Results
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EDI_326260      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India