EDI_336410 | hypothetical protein

_IDPredictionOTHERSPmTPCS_Position
EDI_336410OTHER0.8400260.1531940.006780
No Results

  • Fasta :-

    >EDI_336410 MKLQGLINFGNVCYLNSVLQVLYSIEPLRNYLLNGEYKKDINKTNKMGHEGKYVDTMAEF FSTYSHGQPITNNLLNLLSNLFPFGEQHDSHETLIHLIDCMHEDVCHDGKSIIHDIFYGE VDSTIMCSHCIYQSKTNSNFNCLELDIPKRTSCYSDIDSASLMNDIIVGIKGFANNKLIG SDIYIYLPRVTTANQLYKLIASILHLEPTDISKIFITRNHLRREIFKNEIIRLTDAQVEI HSERKKLTMFSDKSMSIVDALKQYFKPEQMEEWKCEECHNIGGKKCLNFKTFPKYFIMSI KLFEMGYYGCIKKTDYLTFPDRFECQNIVSSFPPYTYEIVSVINHIGCSFFGHYYSYVKF QDKWYCCNDESVNEVSQSDIHQKEAYIVIYKQIN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_336410.fa Sequence name : EDI_336410 Sequence length : 394 VALUES OF COMPUTED PARAMETERS Coef20 : 3.745 CoefTot : -0.805 ChDiff : -7 ZoneTo : 25 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.876 1.241 0.035 0.508 MesoH : -0.440 0.344 -0.347 0.225 MuHd_075 : 14.457 11.112 4.883 2.950 MuHd_095 : 18.046 15.035 7.410 4.579 MuHd_100 : 9.600 11.576 4.485 3.200 MuHd_105 : 11.263 19.025 4.837 4.791 Hmax_075 : 12.367 11.900 2.686 5.390 Hmax_095 : 12.775 15.750 3.526 5.565 Hmax_100 : 12.200 15.700 3.776 5.280 Hmax_105 : 10.100 13.600 4.741 5.080 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7892 0.2108 DFMC : 0.8466 0.1534
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 394 EDI_336410 MKLQGLINFGNVCYLNSVLQVLYSIEPLRNYLLNGEYKKDINKTNKMGHEGKYVDTMAEFFSTYSHGQPITNNLLNLLSN 80 LFPFGEQHDSHETLIHLIDCMHEDVCHDGKSIIHDIFYGEVDSTIMCSHCIYQSKTNSNFNCLELDIPKRTSCYSDIDSA 160 SLMNDIIVGIKGFANNKLIGSDIYIYLPRVTTANQLYKLIASILHLEPTDISKIFITRNHLRREIFKNEIIRLTDAQVEI 240 HSERKKLTMFSDKSMSIVDALKQYFKPEQMEEWKCEECHNIGGKKCLNFKTFPKYFIMSIKLFEMGYYGCIKKTDYLTFP 320 DRFECQNIVSSFPPYTYEIVSVINHIGCSFFGHYYSYVKFQDKWYCCNDESVNEVSQSDIHQKEAYIVIYKQIN 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .......................................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_336410 2 -----MK|LQ 0.067 . EDI_336410 29 YSIEPLR|NY 0.072 . EDI_336410 38 LLNGEYK|KD 0.065 . EDI_336410 39 LNGEYKK|DI 0.145 . EDI_336410 43 YKKDINK|TN 0.060 . EDI_336410 46 DINKTNK|MG 0.070 . EDI_336410 52 KMGHEGK|YV 0.131 . EDI_336410 110 DVCHDGK|SI 0.089 . EDI_336410 135 HCIYQSK|TN 0.067 . EDI_336410 149 LELDIPK|RT 0.057 . EDI_336410 150 ELDIPKR|TS 0.128 . EDI_336410 171 DIIVGIK|GF 0.056 . EDI_336410 177 KGFANNK|LI 0.062 . EDI_336410 189 IYIYLPR|VT 0.087 . EDI_336410 198 TANQLYK|LI 0.085 . EDI_336410 213 EPTDISK|IF 0.059 . EDI_336410 218 SKIFITR|NH 0.077 . EDI_336410 222 ITRNHLR|RE 0.083 . EDI_336410 223 TRNHLRR|EI 0.356 . EDI_336410 227 LRREIFK|NE 0.069 . EDI_336410 232 FKNEIIR|LT 0.114 . EDI_336410 244 VEIHSER|KK 0.081 . EDI_336410 245 EIHSERK|KL 0.076 . EDI_336410 246 IHSERKK|LT 0.134 . EDI_336410 253 LTMFSDK|SM 0.090 . EDI_336410 262 SIVDALK|QY 0.067 . EDI_336410 266 ALKQYFK|PE 0.060 . EDI_336410 274 EQMEEWK|CE 0.062 . EDI_336410 284 CHNIGGK|KC 0.058 . EDI_336410 285 HNIGGKK|CL 0.093 . EDI_336410 290 KKCLNFK|TF 0.063 . EDI_336410 294 NFKTFPK|YF 0.070 . EDI_336410 301 YFIMSIK|LF 0.069 . EDI_336410 312 GYYGCIK|KT 0.059 . EDI_336410 313 YYGCIKK|TD 0.073 . EDI_336410 322 YLTFPDR|FE 0.096 . EDI_336410 359 HYYSYVK|FQ 0.060 . EDI_336410 363 YVKFQDK|WY 0.063 . EDI_336410 383 QSDIHQK|EA 0.077 . EDI_336410 391 AYIVIYK|QI 0.064 . ____________________________^_________________

  • Fasta :-

    >EDI_336410 ATGAAACTTCAAGGACTAATAAATTTTGGTAACGTTTGTTATCTTAATAGTGTTCTTCAA GTGTTATACTCTATCGAACCTCTAAGAAATTATTTGCTTAATGGAGAGTATAAAAAAGAT ATTAATAAAACAAATAAAATGGGACATGAAGGAAAATATGTGGATACTATGGCTGAATTC TTTTCTACTTACTCTCATGGTCAACCTATTACAAATAACTTATTAAATTTGTTGTCTAAT TTATTTCCTTTTGGAGAACAACATGACTCACATGAAACACTTATTCATTTAATTGACTGT ATGCATGAGGATGTATGTCATGATGGAAAAAGTATAATTCATGATATATTTTATGGAGAA GTTGATTCAACAATAATGTGCTCTCATTGTATTTATCAAAGTAAAACTAATTCAAACTTT AATTGTCTTGAATTAGATATTCCTAAAAGAACTAGTTGTTATTCTGATATTGATTCAGCA TCATTAATGAATGATATTATTGTAGGAATTAAGGGATTTGCAAATAATAAATTAATTGGA TCAGATATTTATATTTATCTACCACGAGTAACAACAGCAAATCAATTGTATAAATTAATT GCTTCAATATTACATTTAGAACCAACAGATATATCCAAAATCTTTATTACAAGGAATCAT TTAAGAAGAGAAATTTTTAAAAATGAAATCATTCGGTTAACAGATGCTCAAGTTGAAATA CATAGTGAAAGAAAAAAATTAACAATGTTTTCTGATAAGTCTATGAGTATCGTTGATGCT CTTAAACAATACTTTAAACCAGAACAAATGGAAGAATGGAAATGTGAAGAATGTCATAAT ATTGGAGGTAAAAAATGCCTTAACTTTAAAACATTTCCTAAATACTTTATTATGAGTATA AAATTATTTGAAATGGGCTATTATGGGTGTATTAAAAAAACTGATTATCTTACATTTCCT GATCGTTTTGAATGTCAAAATATTGTATCTTCTTTTCCGCCTTATACATATGAAATTGTT TCTGTTATCAATCATATTGGTTGCTCATTTTTTGGACATTACTATTCTTATGTAAAGTTT CAAGATAAGTGGTATTGTTGTAATGATGAAAGTGTTAACGAAGTGTCCCAAAGTGATATT CATCAAAAAGAGGCATACATTGTAATTTACAAACAAATAAATTGA
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  • Fasta :-

    MKLQGLINFGNVCYLNSVLQVLYSIEPLRNYLLNGEYKKDINKTNKMGHEGKYVDTMAEF FSTYSHGQPITNNLLNLLSNLFPFGEQHDSHETLIHLIDCMHEDVCHDGKSIIHDIFYGE VDSTIMCSHCIYQSKTNSNFNCLELDIPKRTSCYSDIDSASLMNDIIVGIKGFANNKLIG SDIYIYLPRVTTANQLYKLIASILHLEPTDISKIFITRNHLRREIFKNEIIRLTDAQVEI HSERKKLTMFSDKSMSIVDALKQYFKPEQMEEWKCEECHNIGGKKCLNFKTFPKYFIMSI KLFEMGYYGCIKKTDYLTFPDRFECQNIVSSFPPYTYEIVSVINHIGCSFFGHYYSYVKF QDKWYCCNDESVNEVSQSDIHQKEAYIVIYKQIN

  • title: Active Site
  • coordinates: N8,C13,H353,D369
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_336410256 SDKSMSIVDA0.996unspEDI_336410256 SDKSMSIVDA0.996unspEDI_336410256 SDKSMSIVDA0.996unspEDI_336410152 SPKRTSCYSD0.992unspEDI_336410155 STSCYSDIDS0.993unsp

EDI_336410      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India