EDI_336440 | ubiquitin thioesterase OTU1, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_336440OTHER0.9999520.0000440.000005
No Results

  • Fasta :-

    >EDI_336440 MIQDGNKKVKIEVDESCTVGTLRCIIANEFVIEPDLIGITVMNKEINAFDDELAIDVGIK NMTMIRIIHLDKEEKSVKQGKSKSGYIVKIDKLKWVPIRRKMAADNSCLFHCLEYLFYNK SRNDPYHIRQEVSEIVQLYPQKFTTDYLGQPNSLYSQNILNPRTWGSNIEISIYSFLKEC QIIVFDFENNIDITYGDKSLNRCCFIIFTGNHFDVICLSRSLNSPENEDMVLFNNEDEEV KKKMKNYILSEHPKFHFTF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_336440.fa Sequence name : EDI_336440 Sequence length : 259 VALUES OF COMPUTED PARAMETERS Coef20 : 3.157 CoefTot : -0.155 ChDiff : -5 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.035 1.488 0.261 0.559 MesoH : -0.865 0.253 -0.403 0.174 MuHd_075 : 9.580 4.671 1.867 1.470 MuHd_095 : 34.103 21.500 10.805 6.171 MuHd_100 : 30.869 18.374 9.212 5.721 MuHd_105 : 22.511 11.294 5.733 4.510 Hmax_075 : -8.400 1.487 -3.203 0.968 Hmax_095 : 9.188 11.025 2.107 3.579 Hmax_100 : 7.100 10.700 2.272 3.800 Hmax_105 : 0.000 5.950 -1.759 2.380 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9775 0.0225 DFMC : 0.9839 0.0161
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 259 EDI_336440 MIQDGNKKVKIEVDESCTVGTLRCIIANEFVIEPDLIGITVMNKEINAFDDELAIDVGIKNMTMIRIIHLDKEEKSVKQG 80 KSKSGYIVKIDKLKWVPIRRKMAADNSCLFHCLEYLFYNKSRNDPYHIRQEVSEIVQLYPQKFTTDYLGQPNSLYSQNIL 160 NPRTWGSNIEISIYSFLKECQIIVFDFENNIDITYGDKSLNRCCFIIFTGNHFDVICLSRSLNSPENEDMVLFNNEDEEV 240 KKKMKNYILSEHPKFHFTF 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_336440 7 MIQDGNK|KV 0.070 . EDI_336440 8 IQDGNKK|VK 0.081 . EDI_336440 10 DGNKKVK|IE 0.070 . EDI_336440 23 CTVGTLR|CI 0.103 . EDI_336440 44 GITVMNK|EI 0.062 . EDI_336440 60 AIDVGIK|NM 0.058 . EDI_336440 66 KNMTMIR|II 0.082 . EDI_336440 72 RIIHLDK|EE 0.059 . EDI_336440 75 HLDKEEK|SV 0.111 . EDI_336440 78 KEEKSVK|QG 0.058 . EDI_336440 81 KSVKQGK|SK 0.116 . EDI_336440 83 VKQGKSK|SG 0.088 . EDI_336440 89 KSGYIVK|ID 0.057 . EDI_336440 92 YIVKIDK|LK 0.055 . EDI_336440 94 VKIDKLK|WV 0.080 . EDI_336440 99 LKWVPIR|RK 0.099 . EDI_336440 100 KWVPIRR|KM 0.105 . EDI_336440 101 WVPIRRK|MA 0.081 . EDI_336440 120 EYLFYNK|SR 0.060 . EDI_336440 122 LFYNKSR|ND 0.105 . EDI_336440 129 NDPYHIR|QE 0.082 . EDI_336440 142 VQLYPQK|FT 0.081 . EDI_336440 163 QNILNPR|TW 0.102 . EDI_336440 178 SIYSFLK|EC 0.067 . EDI_336440 198 DITYGDK|SL 0.065 . EDI_336440 202 GDKSLNR|CC 0.098 . EDI_336440 220 DVICLSR|SL 0.105 . EDI_336440 241 NEDEEVK|KK 0.054 . EDI_336440 242 EDEEVKK|KM 0.088 . EDI_336440 243 DEEVKKK|MK 0.117 . EDI_336440 245 EVKKKMK|NY 0.067 . EDI_336440 254 ILSEHPK|FH 0.087 . ____________________________^_________________

  • Fasta :-

    >EDI_336440 ATGATTCAAGATGGTAATAAGAAAGTCAAAATTGAAGTAGACGAGAGTTGTACTGTTGGT ACATTAAGGTGTATTATTGCTAATGAATTTGTCATAGAACCAGATTTGATTGGAATAACT GTTATGAATAAAGAAATTAATGCCTTTGATGATGAACTAGCTATTGACGTTGGTATTAAG AATATGACAATGATTAGGATAATTCATTTAGATAAAGAAGAAAAAAGTGTTAAACAAGGT AAAAGTAAAAGTGGATATATTGTAAAAATTGATAAATTAAAATGGGTTCCAATTAGAAGA AAAATGGCTGCTGATAATTCTTGCTTATTCCACTGCTTAGAATATTTATTTTATAATAAA AGTAGAAATGATCCATATCATATTCGACAAGAAGTTTCTGAAATTGTCCAATTATATCCT CAAAAATTTACAACGGATTATTTAGGACAACCAAATTCATTATATTCTCAAAATATTCTC AATCCAAGGACATGGGGAAGTAATATAGAAATTTCTATTTACTCTTTTTTAAAAGAATGT CAAATTATAGTATTTGATTTTGAGAATAATATTGATATTACATATGGTGATAAATCATTA AATCGGTGTTGTTTTATTATTTTTACAGGAAATCATTTTGATGTAATTTGTTTATCACGT TCATTAAATTCTCCAGAAAATGAAGATATGGTATTATTTAATAATGAAGATGAAGAGGTA AAAAAGAAAATGAAAAATTATATTCTCTCTGAACATCCAAAATTCCATTTTACCTTTTAA
  • Download Fasta

  • Fasta :-

    MIQDGNKKVKIEVDESCTVGTLRCIIANEFVIEPDLIGITVMNKEINAFDDELAIDVGIK NMTMIRIIHLDKEEKSVKQGKSKSGYIVKIDKLKWVPIRRKMAADNSCLFHCLEYLFYNK SRNDPYHIRQEVSEIVQLYPQKFTTDYLGQPNSLYSQNILNPRTWGSNIEISIYSFLKEC QIIVFDFENNIDITYGDKSLNRCCFIIFTGNHFDVICLSRSLNSPENEDMVLFNNEDEEV KKKMKNYILSEHPKFHFTF

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_33644076 SKEEKSVKQG0.997unspEDI_336440224 SRSLNSPENE0.997unsp

EDI_336440      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India