EDI_342370 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
EDI_342370OTHER0.9919570.0002060.007837
No Results

  • Fasta :-

    >EDI_342370 MAYFQKLVQHGSYNILSKFYNQIGHEDIQKPIFIGGCSFYILGVEFKTKQMDKQLAEQPP EVYLQYSSAPAFFRISNLFWMTYRSGYEKLPNSSLTTDVGWGCTIRAMQMMIANAMETIV YSGALNNTQTPYIPTKEEIMNVLVPFIDSPNSTTPLSIHHVYESRFVVEKNKSGVNYLAP SVVAKAYSGLVNSWKLCPIRCVMCSNVSIPTHELSKLPFKPTLVFLPIVLNHLIHSKLQQ IYKSKLFAGIVGGMGDRAIFVFGFHALQFLYLDPHIVQPSFKSFTEIDTKSYSPISTNRF SVHTIDPTKLDDFCTFGFLIKNFHEIDDFMKFAKEVFEISNDKELRTSHDLNGFEVLDF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_342370.fa Sequence name : EDI_342370 Sequence length : 359 VALUES OF COMPUTED PARAMETERS Coef20 : 3.597 CoefTot : -1.799 ChDiff : 0 ZoneTo : 25 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.000 1.500 0.153 0.621 MesoH : 0.037 0.674 -0.245 0.342 MuHd_075 : 18.423 15.082 7.011 3.860 MuHd_095 : 40.250 33.688 14.309 9.838 MuHd_100 : 28.588 27.168 10.868 6.906 MuHd_105 : 18.878 16.636 6.573 4.263 Hmax_075 : 10.300 10.700 1.610 3.820 Hmax_095 : 17.238 19.600 3.830 6.650 Hmax_100 : 11.800 15.500 1.780 5.170 Hmax_105 : 6.300 7.800 -0.348 3.932 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4855 0.5145 DFMC : 0.7805 0.2195
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 359 EDI_342370 MAYFQKLVQHGSYNILSKFYNQIGHEDIQKPIFIGGCSFYILGVEFKTKQMDKQLAEQPPEVYLQYSSAPAFFRISNLFW 80 MTYRSGYEKLPNSSLTTDVGWGCTIRAMQMMIANAMETIVYSGALNNTQTPYIPTKEEIMNVLVPFIDSPNSTTPLSIHH 160 VYESRFVVEKNKSGVNYLAPSVVAKAYSGLVNSWKLCPIRCVMCSNVSIPTHELSKLPFKPTLVFLPIVLNHLIHSKLQQ 240 IYKSKLFAGIVGGMGDRAIFVFGFHALQFLYLDPHIVQPSFKSFTEIDTKSYSPISTNRFSVHTIDPTKLDDFCTFGFLI 320 KNFHEIDDFMKFAKEVFEISNDKELRTSHDLNGFEVLDF 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ....................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_342370 6 -MAYFQK|LV 0.080 . EDI_342370 18 SYNILSK|FY 0.095 . EDI_342370 30 GHEDIQK|PI 0.077 . EDI_342370 47 ILGVEFK|TK 0.060 . EDI_342370 49 GVEFKTK|QM 0.082 . EDI_342370 53 KTKQMDK|QL 0.070 . EDI_342370 74 SAPAFFR|IS 0.084 . EDI_342370 84 LFWMTYR|SG 0.129 . EDI_342370 89 YRSGYEK|LP 0.070 . EDI_342370 106 GWGCTIR|AM 0.087 . EDI_342370 136 TPYIPTK|EE 0.067 . EDI_342370 165 HHVYESR|FV 0.125 . EDI_342370 170 SRFVVEK|NK 0.074 . EDI_342370 172 FVVEKNK|SG 0.068 . EDI_342370 185 APSVVAK|AY 0.118 . EDI_342370 195 GLVNSWK|LC 0.060 . EDI_342370 200 WKLCPIR|CV 0.122 . EDI_342370 216 PTHELSK|LP 0.055 . EDI_342370 220 LSKLPFK|PT 0.070 . EDI_342370 237 NHLIHSK|LQ 0.057 . EDI_342370 243 KLQQIYK|SK 0.077 . EDI_342370 245 QQIYKSK|LF 0.074 . EDI_342370 257 VGGMGDR|AI 0.088 . EDI_342370 282 IVQPSFK|SF 0.096 . EDI_342370 290 FTEIDTK|SY 0.075 . EDI_342370 299 SPISTNR|FS 0.096 . EDI_342370 309 HTIDPTK|LD 0.062 . EDI_342370 321 TFGFLIK|NF 0.067 . EDI_342370 331 EIDDFMK|FA 0.076 . EDI_342370 334 DFMKFAK|EV 0.092 . EDI_342370 343 FEISNDK|EL 0.059 . EDI_342370 346 SNDKELR|TS 0.095 . ____________________________^_________________

  • Fasta :-

    >EDI_342370 ATGGCTTATTTCCAGAAACTTGTACAGCATGGAAGTTATAATATTCTTAGTAAATTTTAT AATCAAATAGGTCATGAAGATATACAAAAACCAATATTTATTGGTGGGTGTTCATTTTAT ATTCTTGGAGTAGAATTTAAAACTAAACAAATGGATAAACAATTAGCAGAACAACCACCA GAAGTTTATCTTCAGTACAGTTCAGCACCAGCATTTTTTCGAATATCAAATTTATTTTGG ATGACATACCGTTCAGGGTATGAAAAATTACCAAATTCATCATTAACAACTGATGTAGGA TGGGGGTGTACTATTCGTGCTATGCAAATGATGATAGCTAATGCAATGGAAACAATTGTA TATTCCGGTGCTCTTAATAATACACAAACACCATACATCCCAACAAAAGAAGAAATAATG AATGTATTAGTTCCATTTATTGATTCACCTAATTCAACAACTCCACTATCAATTCATCAT GTTTATGAATCTCGTTTTGTAGTAGAAAAAAATAAGTCTGGAGTAAACTATTTAGCTCCA TCAGTTGTTGCAAAAGCTTATTCAGGTCTTGTTAATTCATGGAAATTATGTCCTATTAGA TGTGTTATGTGTTCAAATGTTTCAATACCAACTCATGAATTAAGTAAACTTCCTTTTAAA CCAACTCTTGTATTTCTTCCTATTGTATTAAATCATTTAATTCATTCGAAATTACAGCAA ATTTATAAATCAAAATTGTTTGCTGGTATTGTTGGTGGAATGGGAGACAGAGCAATTTTT GTTTTTGGATTTCATGCATTACAATTTCTTTATCTTGACCCACATATTGTACAACCATCA TTTAAATCATTTACTGAAATAGACACAAAATCTTATTCTCCAATTAGTACAAATAGATTT AGTGTTCATACAATAGATCCAACTAAATTAGATGATTTTTGTACTTTCGGATTTCTTATT AAAAACTTTCACGAAATTGATGATTTTATGAAGTTCGCAAAAGAAGTTTTTGAGATATCA AATGATAAAGAATTGAGAACTTCTCATGATTTAAATGGTTTTGAAGTATTAGATTTTTAG
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  • Fasta :-

    MAYFQKLVQHGSYNILSKFYNQIGHEDIQKPIFIGGCSFYILGVEFKTKQMDKQLAEQPP EVYLQYSSAPAFFRISNLFWMTYRSGYEKLPNSSLTTDVGWGCTIRAMQMMIANAMETIV YSGALNNTQTPYIPTKEEIMNVLVPFIDSPNSTTPLSIHHVYESRFVVEKNKSGVNYLAP SVVAKAYSGLVNSWKLCPIRCVMCSNVSIPTHELSKLPFKPTLVFLPIVLNHLIHSKLQQ IYKSKLFAGIVGGMGDRAIFVFGFHALQFLYLDPHIVQPSFKSFTEIDTKSYSPISTNRF SVHTIDPTKLDDFCTFGFLIKNFHEIDDFMKFAKEVFEISNDKELRTSHDLNGFEVLDF

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EDI_342370      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India