EHI_004620 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008236      

  • Computed_GO_Functions:  serine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EHI_004620OTHER0.9991590.0007670.000074
No Results

  • Fasta :-

    >EHI_004620 MGNSITCKYAFLPPQNKYSINAFEICHINNRHVPYYIINSEFPSNGYIIFSHGNAEDIST SIECMRRFSKIVRCNIIGYDYTGYGSNIGDPSESNCDQDILAIFLMAVKDMNIPQQNIAL MGHSIGCGPTLWLANQIQLDKLKKYNIQQGILGSVLSISGFTSACAVVDQRLTYIPFTDI FNNENTIKELKMPVFIAHGLNDTIIHVSHATRLSEAIKCKDNFELYLVEDCGHNDIFSNI EFQTAILSFIESYFQNHLIN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_004620.fa Sequence name : EHI_004620 Sequence length : 260 VALUES OF COMPUTED PARAMETERS Coef20 : 3.508 CoefTot : -3.943 ChDiff : -8 ZoneTo : 55 KR : 3 DE : 2 CleavSite : 33 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.853 1.718 0.421 0.595 MesoH : -0.092 0.513 -0.269 0.287 MuHd_075 : 32.679 29.015 9.169 8.876 MuHd_095 : 26.829 20.170 9.487 5.234 MuHd_100 : 29.739 14.341 9.278 4.718 MuHd_105 : 32.653 16.262 9.963 5.067 Hmax_075 : 14.700 20.183 2.184 7.117 Hmax_095 : 9.713 13.300 2.384 4.681 Hmax_100 : 4.400 12.700 1.272 2.710 Hmax_105 : 8.400 11.317 2.121 3.535 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9215 0.0785 DFMC : 0.9424 0.0576
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 260 EHI_004620 MGNSITCKYAFLPPQNKYSINAFEICHINNRHVPYYIINSEFPSNGYIIFSHGNAEDISTSIECMRRFSKIVRCNIIGYD 80 YTGYGSNIGDPSESNCDQDILAIFLMAVKDMNIPQQNIALMGHSIGCGPTLWLANQIQLDKLKKYNIQQGILGSVLSISG 160 FTSACAVVDQRLTYIPFTDIFNNENTIKELKMPVFIAHGLNDTIIHVSHATRLSEAIKCKDNFELYLVEDCGHNDIFSNI 240 EFQTAILSFIESYFQNHLIN 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_004620 8 GNSITCK|YA 0.082 . EHI_004620 17 FLPPQNK|YS 0.064 . EHI_004620 31 ICHINNR|HV 0.113 . EHI_004620 66 TSIECMR|RF 0.119 . EHI_004620 67 SIECMRR|FS 0.150 . EHI_004620 70 CMRRFSK|IV 0.193 . EHI_004620 73 RFSKIVR|CN 0.118 . EHI_004620 109 IFLMAVK|DM 0.057 . EHI_004620 141 NQIQLDK|LK 0.056 . EHI_004620 143 IQLDKLK|KY 0.068 . EHI_004620 144 QLDKLKK|YN 0.120 . EHI_004620 171 CAVVDQR|LT 0.078 . EHI_004620 188 NNENTIK|EL 0.060 . EHI_004620 191 NTIKELK|MP 0.057 . EHI_004620 212 HVSHATR|LS 0.106 . EHI_004620 218 RLSEAIK|CK 0.078 . EHI_004620 220 SEAIKCK|DN 0.083 . ____________________________^_________________

  • Fasta :-

    >EHI_004620 ATGGGTAACAGCATCACTTGTAAGTATGCTTTTCTTCCTCCTCAAAACAAATATTCTATT AATGCATTTGAAATTTGCCATATCAACAATAGACATGTTCCTTATTATATAATAAATTCT GAATTTCCAAGTAATGGGTATATTATATTTTCACATGGAAATGCTGAAGATATTTCTACT TCTATAGAGTGTATGAGGAGATTTTCTAAAATTGTTCGATGCAATATTATTGGTTATGAT TACACTGGATATGGAAGTAATATTGGTGACCCTTCAGAAAGTAATTGTGATCAAGACATT TTAGCGATTTTTCTTATGGCTGTAAAAGACATGAATATACCACAACAAAATATTGCACTT ATGGGTCATTCTATAGGATGTGGACCAACACTCTGGTTAGCAAATCAAATTCAATTGGAT AAACTAAAAAAATATAATATTCAACAAGGTATTCTTGGGAGTGTATTATCTATAAGTGGA TTTACTTCTGCTTGTGCTGTTGTTGATCAAAGACTAACATACATTCCATTTACTGATATT TTCAATAATGAGAATACAATTAAAGAGTTAAAAATGCCAGTCTTTATTGCTCATGGTTTA AATGATACAATTATTCATGTTTCACATGCTACTCGTTTAAGTGAAGCTATTAAATGTAAA GACAATTTTGAGTTGTATTTAGTAGAAGACTGTGGGCATAATGATATATTTAGTAATATA GAATTTCAAACAGCAATATTGTCATTTATAGAAAGTTATTTTCAAAACCATCTTATTAAT TAA
  • Download Fasta

  • Fasta :-

    MGNSITCKYAFLPPQNKYSINAFEICHINNRHVPYYIINSEFPSNGYIIFSHGNAEDIST SIECMRRFSKIVRCNIIGYDYTGYGSNIGDPSESNCDQDILAIFLMAVKDMNIPQQNIAL MGHSIGCGPTLWLANQIQLDKLKKYNIQQGILGSVLSISGFTSACAVVDQRLTYIPFTDI FNNENTIKELKMPVFIAHGLNDTIIHVSHATRLSEAIKCKDNFELYLVEDCGHNDIFSNI EFQTAILSFIESYFQNHLIN

    No Results
No Results
No Results
IDSitePeptideScoreMethod
EHI_00462094 SDPSESNCDQ0.995unsp

EHI_004620      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India