EHI_005870 | proteasome regulatory subunit, putative

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_IDPredictionOTHERSPmTPCS_Position
EHI_005870OTHER0.9999560.0000390.000005
No Results

  • Fasta :-

    >EHI_005870 MPEATIIIIDTSDYMRNGDYTPSRMEAQIEAVQAITSGRLRKNPENHVGFIAAGSESKRI LVTLTGDFGKILSGLHEAKIGGSSDFKQALLVAKLALANRVDKIYTQRIILFVGSPLNIN SDEAQTMVNLLKKSNIALDIVSFGEVVDNAPVIELFPSQMGDDCTLVTVPAGPHILLDMI SKTNIIMRDGGLNTFDPEFDPEYAAAIRASMGDVNGGTEFYDEDAALRAAIAASLADYEN LQTTNVQESKKEEQKEMTMEEEIEEAIKMSLEDNAKSNQSKEEKKEENDDKKMEEDKKNK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_005870.fa Sequence name : EHI_005870 Sequence length : 300 VALUES OF COMPUTED PARAMETERS Coef20 : 3.445 CoefTot : -0.253 ChDiff : -20 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.035 1.371 0.121 0.539 MesoH : -0.364 0.568 -0.318 0.295 MuHd_075 : 13.405 5.909 3.284 2.613 MuHd_095 : 19.889 11.274 5.106 2.659 MuHd_100 : 35.030 15.438 8.007 4.482 MuHd_105 : 43.418 15.627 9.346 5.654 Hmax_075 : 3.617 6.533 -0.373 3.803 Hmax_095 : 5.200 8.100 -0.020 3.750 Hmax_100 : 16.800 13.500 2.558 5.130 Hmax_105 : 14.600 10.675 2.036 4.750 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9534 0.0466 DFMC : 0.9412 0.0588
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 300 EHI_005870 MPEATIIIIDTSDYMRNGDYTPSRMEAQIEAVQAITSGRLRKNPENHVGFIAAGSESKRILVTLTGDFGKILSGLHEAKI 80 GGSSDFKQALLVAKLALANRVDKIYTQRIILFVGSPLNINSDEAQTMVNLLKKSNIALDIVSFGEVVDNAPVIELFPSQM 160 GDDCTLVTVPAGPHILLDMISKTNIIMRDGGLNTFDPEFDPEYAAAIRASMGDVNGGTEFYDEDAALRAAIAASLADYEN 240 LQTTNVQESKKEEQKEMTMEEEIEEAIKMSLEDNAKSNQSKEEKKEENDDKKMEEDKKNK 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................................................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_005870 16 DTSDYMR|NG 0.081 . EHI_005870 24 GDYTPSR|ME 0.129 . EHI_005870 39 QAITSGR|LR 0.086 . EHI_005870 41 ITSGRLR|KN 0.085 . EHI_005870 42 TSGRLRK|NP 0.258 . EHI_005870 58 AAGSESK|RI 0.059 . EHI_005870 59 AGSESKR|IL 0.223 . EHI_005870 70 LTGDFGK|IL 0.070 . EHI_005870 79 SGLHEAK|IG 0.068 . EHI_005870 87 GGSSDFK|QA 0.066 . EHI_005870 94 QALLVAK|LA 0.067 . EHI_005870 100 KLALANR|VD 0.072 . EHI_005870 103 LANRVDK|IY 0.146 . EHI_005870 108 DKIYTQR|II 0.085 . EHI_005870 132 TMVNLLK|KS 0.073 . EHI_005870 133 MVNLLKK|SN 0.139 . EHI_005870 182 LLDMISK|TN 0.064 . EHI_005870 188 KTNIIMR|DG 0.137 . EHI_005870 208 EYAAAIR|AS 0.083 . EHI_005870 228 DEDAALR|AA 0.080 . EHI_005870 250 TNVQESK|KE 0.089 . EHI_005870 251 NVQESKK|EE 0.106 . EHI_005870 255 SKKEEQK|EM 0.069 . EHI_005870 268 EIEEAIK|MS 0.057 . EHI_005870 276 SLEDNAK|SN 0.082 . EHI_005870 281 AKSNQSK|EE 0.084 . EHI_005870 284 NQSKEEK|KE 0.066 . EHI_005870 285 QSKEEKK|EE 0.099 . EHI_005870 291 KEENDDK|KM 0.065 . EHI_005870 292 EENDDKK|ME 0.114 . EHI_005870 297 KKMEEDK|KN 0.064 . EHI_005870 298 KMEEDKK|NK 0.088 . EHI_005870 300 EEDKKNK|-- 0.065 . ____________________________^_________________

  • Fasta :-

    >EHI_005870 ATGCCAGAAGCAACGATTATTATTATAGATACATCTGATTATATGAGAAATGGTGATTAT ACCCCAAGTCGAATGGAGGCACAGATTGAAGCAGTTCAAGCAATCACTTCAGGAAGATTA AGAAAAAATCCAGAAAATCATGTTGGTTTCATTGCTGCTGGAAGTGAATCAAAGAGAATC CTTGTTACTCTTACAGGTGATTTTGGAAAAATTTTAAGTGGATTACATGAAGCCAAAATT GGTGGTTCAAGTGACTTCAAACAAGCGTTATTAGTAGCTAAATTAGCACTTGCTAATAGA GTTGATAAAATATACACACAACGAATCATTTTATTTGTTGGATCACCTTTAAATATTAAT TCAGATGAAGCACAAACAATGGTTAATTTATTAAAGAAAAGTAATATTGCATTAGACATT GTTTCATTTGGAGAGGTTGTTGATAATGCACCAGTCATTGAGTTATTCCCATCTCAAATG GGGGATGATTGTACTTTAGTAACAGTTCCAGCAGGACCACATATTTTACTTGATATGATT TCTAAAACTAATATTATTATGAGAGATGGAGGATTAAATACATTTGATCCAGAATTTGAT CCAGAGTATGCTGCTGCTATTCGTGCATCCATGGGAGATGTTAATGGTGGAACAGAATTC TATGATGAAGATGCAGCATTAAGAGCTGCTATTGCAGCATCATTAGCAGACTATGAAAAT TTACAAACAACAAATGTCCAAGAATCAAAAAAAGAAGAACAGAAAGAAATGACAATGGAA GAAGAGATTGAAGAAGCAATTAAAATGTCATTAGAGGATAATGCCAAAAGTAATCAATCT AAAGAAGAAAAGAAAGAAGAAAATGATGATAAAAAAATGGAAGAAGACAAAAAAAATAAA TAA
  • Download Fasta

  • Fasta :-

    MPEATIIIIDTSDYMRNGDYTPSRMEAQIEAVQAITSGRLRKNPENHVGFIAAGSESKRI LVTLTGDFGKILSGLHEAKIGGSSDFKQALLVAKLALANRVDKIYTQRIILFVGSPLNIN SDEAQTMVNLLKKSNIALDIVSFGEVVDNAPVIELFPSQMGDDCTLVTVPAGPHILLDMI SKTNIIMRDGGLNTFDPEFDPEYAAAIRASMGDVNGGTEFYDEDAALRAAIAASLADYEN LQTTNVQESKKEEQKEMTMEEEIEEAIKMSLEDNAKSNQSKEEKKEENDDKKMEEDKKNK

  • title: metal ion-dependent adhesion site (MIDAS)
  • coordinates: D10,S84,G114
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_005870280 SKSNQSKEEK0.997unspEHI_005870280 SKSNQSKEEK0.997unspEHI_005870280 SKSNQSKEEK0.997unspEHI_005870249 SNVQESKKEE0.998unspEHI_005870270 SAIKMSLEDN0.994unsp

EHI_005870      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India