EHI_011810 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
EHI_011810SP0.0012050.9987870.000008CS pos: 18-19. SYA-LY. Pr: 0.9332
No Results

  • Fasta :-

    >EHI_011810 MLKHILFILLFVILNSYALYYPSNPNIPSMNKIKYDYQLPFDLIDLKTKTKDNEIVHLYY GIHPNSSQLLVLFQSNAGCFLDRLFLLKSFYSKFNISVGILSYRGYGNSTGKPSEQGFIE DALASLSHLSKDGIPIQNITIIGRSIGVGVALSVAQILPIKKLILENGFTNLVDFLPNLQ NNEVMIRDPWLNEQKIETINKKTSILFLLSEGDEIVPPWMTRKMEMKARSMGIQTKLVSF PGARHMQLPYYDNYYRVIKEFLIEQNQGDFSK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_011810.fa Sequence name : EHI_011810 Sequence length : 272 VALUES OF COMPUTED PARAMETERS Coef20 : 4.427 CoefTot : -1.292 ChDiff : 4 ZoneTo : 35 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.682 2.112 0.271 0.802 MesoH : -0.303 0.551 -0.280 0.292 MuHd_075 : 15.783 17.960 5.409 4.732 MuHd_095 : 18.834 17.155 7.013 4.606 MuHd_100 : 19.450 16.749 5.648 3.401 MuHd_105 : 16.542 15.123 5.203 3.075 Hmax_075 : 13.800 16.000 2.885 5.560 Hmax_095 : 6.500 23.363 4.087 7.490 Hmax_100 : 8.800 9.600 4.413 3.400 Hmax_105 : 7.500 9.100 0.208 3.900 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8455 0.1545 DFMC : 0.9157 0.0843
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 272 EHI_011810 MLKHILFILLFVILNSYALYYPSNPNIPSMNKIKYDYQLPFDLIDLKTKTKDNEIVHLYYGIHPNSSQLLVLFQSNAGCF 80 LDRLFLLKSFYSKFNISVGILSYRGYGNSTGKPSEQGFIEDALASLSHLSKDGIPIQNITIIGRSIGVGVALSVAQILPI 160 KKLILENGFTNLVDFLPNLQNNEVMIRDPWLNEQKIETINKKTSILFLLSEGDEIVPPWMTRKMEMKARSMGIQTKLVSF 240 PGARHMQLPYYDNYYRVIKEFLIEQNQGDFSK 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_011810 3 ----MLK|HI 0.064 . EHI_011810 32 NIPSMNK|IK 0.057 . EHI_011810 34 PSMNKIK|YD 0.080 . EHI_011810 47 FDLIDLK|TK 0.054 . EHI_011810 49 LIDLKTK|TK 0.068 . EHI_011810 51 DLKTKTK|DN 0.076 . EHI_011810 83 AGCFLDR|LF 0.075 . EHI_011810 88 DRLFLLK|SF 0.079 . EHI_011810 93 LKSFYSK|FN 0.079 . EHI_011810 104 VGILSYR|GY 0.110 . EHI_011810 112 YGNSTGK|PS 0.077 . EHI_011810 131 SLSHLSK|DG 0.097 . EHI_011810 144 NITIIGR|SI 0.166 . EHI_011810 161 AQILPIK|KL 0.058 . EHI_011810 162 QILPIKK|LI 0.082 . EHI_011810 187 NNEVMIR|DP 0.092 . EHI_011810 195 PWLNEQK|IE 0.058 . EHI_011810 201 KIETINK|KT 0.065 . EHI_011810 202 IETINKK|TS 0.083 . EHI_011810 222 VPPWMTR|KM 0.093 . EHI_011810 223 PPWMTRK|ME 0.105 . EHI_011810 227 TRKMEMK|AR 0.103 . EHI_011810 229 KMEMKAR|SM 0.280 . EHI_011810 236 SMGIQTK|LV 0.083 . EHI_011810 244 VSFPGAR|HM 0.069 . EHI_011810 256 YYDNYYR|VI 0.073 . EHI_011810 259 NYYRVIK|EF 0.121 . EHI_011810 272 NQGDFSK|-- 0.070 . ____________________________^_________________

  • Fasta :-

    >EHI_011810 ATGTTAAAACATATACTTTTCATTTTATTATTTGTGATTCTAAATTCTTATGCCTTGTAT TATCCATCTAATCCTAATATCCCATCAATGAATAAAATAAAATATGATTACCAATTACCC TTTGACTTAATTGATTTGAAAACAAAAACAAAAGATAATGAAATTGTCCATTTGTATTAT GGAATTCATCCTAATTCTTCTCAGTTGTTAGTATTATTCCAAAGTAATGCAGGTTGTTTT CTTGATAGATTATTTCTCCTTAAATCTTTTTACTCTAAATTCAATATAAGTGTAGGAATA TTGTCATATCGTGGATATGGAAATTCAACAGGAAAACCATCTGAACAAGGATTTATTGAA GATGCACTAGCCTCTCTTTCTCATTTAAGCAAAGATGGAATTCCTATTCAAAACATCACC ATTATAGGAAGATCCATTGGAGTTGGTGTTGCATTAAGTGTTGCTCAAATACTTCCTATA AAAAAACTTATTCTTGAAAATGGATTTACTAATCTTGTTGACTTTCTTCCAAATTTACAA AACAATGAAGTTATGATTCGTGACCCATGGTTAAATGAACAGAAGATTGAGACAATTAAT AAGAAAACTTCAATTTTATTTTTATTATCAGAAGGAGATGAAATAGTTCCACCTTGGATG ACCAGAAAAATGGAAATGAAAGCACGAAGTATGGGTATTCAAACAAAGTTAGTTTCATTT CCAGGAGCAAGACATATGCAACTTCCTTATTATGATAATTATTATCGAGTAATCAAGGAA TTTTTAATTGAACAAAATCAAGGAGACTTTTCAAAATAA
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  • Fasta :-

    MLKHILFILLFVILNSYALYYPSNPNIPSMNKIKYDYQLPFDLIDLKTKTKDNEIVHLYY GIHPNSSQLLVLFQSNAGCFLDRLFLLKSFYSKFNISVGILSYRGYGNSTGKPSEQGFIE DALASLSHLSKDGIPIQNITIIGRSIGVGVALSVAQILPIKKLILENGFTNLVDFLPNLQ NNEVMIRDPWLNEQKIETINKKTSILFLLSEGDEIVPPWMTRKMEMKARSMGIQTKLVSF PGARHMQLPYYDNYYRVIKEFLIEQNQGDFSK

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EHI_011810      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India