EHI_015550 | retroviral aspartyl protease domain-containing protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EHI_015550OTHER0.9997670.0002180.000015
No Results

  • Fasta :-

    >EHI_015550 MEIVKEQQKIEERIRQEEIERQIKVLEKEHPELLVKGELVFIKVKINGVVKEAMIDCGAQ ETVISIRACKECNLETQIDYRVKKMYQGVGRMETIGVIHLVPIIIGNTYCITTLNVLGDD SPLDHLLIGTNTLKSIGAVIDFSEGVLRIKNDKIKFMSNTDVDYILQKPFHIRQIHGDSS FNKTNPIFKPTLPHFENACLPRYPISLIEQVMIDGKTEEEASEILDKSGGDISFSKIKX
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_015550.fa Sequence name : EHI_015550 Sequence length : 239 VALUES OF COMPUTED PARAMETERS Coef20 : 3.137 CoefTot : 0.000 ChDiff : -5 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.359 1.800 0.289 0.712 MesoH : -0.435 0.544 -0.292 0.285 MuHd_075 : 19.186 17.875 6.757 2.719 MuHd_095 : 20.125 14.791 7.144 5.456 MuHd_100 : 26.357 20.194 8.886 7.129 MuHd_105 : 34.490 23.760 10.629 8.079 Hmax_075 : -19.833 2.217 -6.733 0.187 Hmax_095 : -23.500 -1.500 -6.534 0.341 Hmax_100 : -8.600 7.200 -3.064 2.970 Hmax_105 : -0.467 12.483 -0.726 4.328 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9593 0.0407 DFMC : 0.9777 0.0223
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 239 EHI_015550 MEIVKEQQKIEERIRQEEIERQIKVLEKEHPELLVKGELVFIKVKINGVVKEAMIDCGAQETVISIRACKECNLETQIDY 80 RVKKMYQGVGRMETIGVIHLVPIIIGNTYCITTLNVLGDDSPLDHLLIGTNTLKSIGAVIDFSEGVLRIKNDKIKFMSNT 160 DVDYILQKPFHIRQIHGDSSFNKTNPIFKPTLPHFENACLPRYPISLIEQVMIDGKTEEEASEILDKSGGDISFSKIKX 240 ................................................................................ 80 ................................................................................ 160 ............................................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0

  • Fasta :-

    >EHI_015550 ATGGAAATTGTTAAAGAACAACAGAAAATAGAAGAAAGAATAAGACAAGAAGAAATTGAA AGACAGATAAAAGTTCTAGAAAAAGAACATCCAGAGTTATTAGTTAAAGGAGAATTAGTG TTTATTAAAGTTAAAATTAATGGAGTTGTCAAAGAGGCAATGATAGACTGTGGGGCACAA GAAACAGTAATATCAATCAGAGCATGTAAAGAATGTAATTTAGAAACACAAATAGATTAT AGAGTAAAAAAAATGTATCAAGGAGTAGGAAGAATGGAAACAATAGGGGTCATTCATCTT GTTCCAATAATTATTGGAAATACGTATTGTATTACAACACTGAATGTGCTTGGAGATGAT TCACCACTTGACCATTTGTTAATAGGGACAAACACACTTAAATCAATTGGTGCAGTTATA GACTTTTCTGAAGGTGTGTTAAGAATTAAAAATGACAAGATTAAATTTATGAGTAACACT GATGTTGATTATATTTTGCAGAAACCTTTTCACATTAGACAAATTCATGGTGATTCTTCG TTTAATAAAACTAATCCTATCTTTAAACCCACATTACCTCACTTTGAAAATGCATGTCTT CCTCGATACCCAATTTCTCTTATTGAACAAGTTATGATAGATGGAAAAACTGAAGAAGAA GCAAGTGAAATATTAGACAAGTCAGGAGGTGATATTTCATTCAGTAAAATAAAACTN
  • Download Fasta

  • Fasta :-

    MEIVKEQQKIEERIRQEEIERQIKVLEKEHPELLVKGELVFIKVKINGVVKEAMIDCGAQ ETVISIRACKECNLETQIDYRVKKMYQGVGRMETIGVIHLVPIIIGNTYCITTLNVLGDD SPLDHLLIGTNTLKSIGAVIDFSEGVLRIKNDKIKFMSNTDVDYILQKPFHIRQIHGDSS FNKTNPIFKPTLPHFENACLPRYPISLIEQVMIDGKTEEEASEILDKSGGDISFSKIKX

  • title: catalytic motif
  • coordinates: D56,C57,G58
No Results
No Results
IDSitePeptideScoreMethod
EHI_015550228 SILDKSGGDI0.992unsp

EHI_015550      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India