EHI_020250 | lecithin:cholesterol acyltransferase domain-containing protein

_IDPredictionOTHERSPmTPCS_Position
EHI_020250SP0.0001910.9997960.000013CS pos: 15-16. AIA-ET. Pr: 0.7454
No Results

  • Fasta :-

    >EHI_020250 MNIFFLCLTLSIAIAETCTRHPVIIIPGIMASMLNAKINIPKNVDFCDRKLDCDRSKDWF TLWLNLLDGIPYVNDCYIAYLTCHYNSTSGRMENVEGVQIEPPRFGSTYAVDTISPSFPL KTFSRAFHEVIKGLQKIGYKDEFDLFSAPYDWRYYHHDEYYEKVKELIIKAYENTGNKVV LVSHSMGGLTTYILLDKLGKEFCDKYIHRWVAMSTPFIGTTIANDVVLAGYNMGYPVSKE LIKKAARTFETVAMMGPIGEYWDQNEVLVELANGKKYYPKDQIELFSQLEEMKPFAKEAV ENSFAPYLKKYNSQVPHGVEMHCGITSGIETAHKITFKGDTFDSKSTIEFVDGDQEVTLN SLEYCKKMTENFTNLGKYTHQGMLLKKEVIEYVKNLACD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_020250.fa Sequence name : EHI_020250 Sequence length : 399 VALUES OF COMPUTED PARAMETERS Coef20 : 4.976 CoefTot : -0.832 ChDiff : -8 ZoneTo : 44 KR : 3 DE : 1 CleavSite : 22 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.665 1.924 0.410 0.626 MesoH : -0.387 0.486 -0.331 0.244 MuHd_075 : 27.951 19.858 8.851 5.926 MuHd_095 : 27.945 18.486 9.305 5.987 MuHd_100 : 23.667 17.905 9.027 5.269 MuHd_105 : 21.322 13.654 7.329 4.921 Hmax_075 : 16.000 27.650 4.926 5.520 Hmax_095 : 16.800 19.775 6.717 6.361 Hmax_100 : 17.300 15.200 6.717 6.630 Hmax_105 : 17.500 12.950 6.433 5.757 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7213 0.2787 DFMC : 0.7507 0.2493
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 399 EHI_020250 MNIFFLCLTLSIAIAETCTRHPVIIIPGIMASMLNAKINIPKNVDFCDRKLDCDRSKDWFTLWLNLLDGIPYVNDCYIAY 80 LTCHYNSTSGRMENVEGVQIEPPRFGSTYAVDTISPSFPLKTFSRAFHEVIKGLQKIGYKDEFDLFSAPYDWRYYHHDEY 160 YEKVKELIIKAYENTGNKVVLVSHSMGGLTTYILLDKLGKEFCDKYIHRWVAMSTPFIGTTIANDVVLAGYNMGYPVSKE 240 LIKKAARTFETVAMMGPIGEYWDQNEVLVELANGKKYYPKDQIELFSQLEEMKPFAKEAVENSFAPYLKKYNSQVPHGVE 320 MHCGITSGIETAHKITFKGDTFDSKSTIEFVDGDQEVTLNSLEYCKKMTENFTNLGKYTHQGMLLKKEVIEYVKNLACD 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............................................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0

  • Fasta :-

    >EHI_020250 ATGAACATTTTCTTTCTTTGTTTGACTTTATCTATTGCTATTGCAGAAACCTGTACCCGT CATCCAGTTATTATTATTCCTGGAATTATGGCTTCAATGCTTAATGCTAAAATAAATATC CCTAAGAATGTTGACTTCTGTGATAGAAAACTTGATTGCGATAGATCTAAAGATTGGTTC ACATTATGGCTAAATCTGTTAGATGGAATTCCATATGTCAATGATTGTTATATTGCTTAT TTAACATGTCATTATAATTCAACTTCAGGTAGAATGGAAAATGTTGAAGGAGTACAAATA GAACCTCCAAGATTTGGATCTACTTATGCCGTAGATACTATCTCTCCATCATTCCCATTA AAGACATTTTCTCGTGCATTCCATGAAGTTATAAAAGGATTACAAAAAATTGGATATAAA GATGAATTTGATTTGTTCTCTGCACCTTATGATTGGAGGTATTATCATCATGATGAATAT TATGAAAAAGTTAAAGAGTTAATAATTAAAGCTTATGAAAATACTGGTAATAAAGTAGTT TTAGTTTCACATTCTATGGGAGGATTAACTACTTATATTTTATTAGATAAACTTGGCAAA GAGTTTTGTGATAAGTATATTCATAGATGGGTTGCTATGTCTACTCCATTCATTGGGACA ACTATTGCTAATGATGTTGTTCTTGCTGGATATAATATGGGATATCCTGTTTCTAAAGAA TTAATTAAAAAAGCAGCAAGAACATTTGAGACAGTAGCTATGATGGGGCCTATAGGAGAG TATTGGGATCAAAATGAAGTTTTAGTAGAATTAGCTAATGGCAAGAAATATTATCCAAAA GACCAAATTGAGTTATTTAGTCAATTAGAAGAAATGAAACCATTTGCTAAAGAAGCAGTA GAAAATTCATTTGCTCCATATCTTAAGAAATATAATTCACAAGTACCACATGGAGTAGAA ATGCATTGTGGTATTACAAGTGGAATAGAAACTGCACATAAAATAACATTTAAAGGGGAT ACTTTTGATTCTAAATCAACTATAGAATTTGTAGATGGTGATCAAGAAGTTACTTTGAAC AGTTTAGAATATTGTAAAAAGATGACAGAAAACTTTACTAATTTAGGTAAATATACTCAC CAAGGAATGTTGTTAAAGAAAGAAGTGATTGAATATGTTAAAAATCTTGCTTGTGACTAA
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  • Fasta :-

    MNIFFLCLTLSIAIAETCTRHPVIIIPGIMASMLNAKINIPKNVDFCDRKLDCDRSKDWF TLWLNLLDGIPYVNDCYIAYLTCHYNSTSGRMENVEGVQIEPPRFGSTYAVDTISPSFPL KTFSRAFHEVIKGLQKIGYKDEFDLFSAPYDWRYYHHDEYYEKVKELIIKAYENTGNKVV LVSHSMGGLTTYILLDKLGKEFCDKYIHRWVAMSTPFIGTTIANDVVLAGYNMGYPVSKE LIKKAARTFETVAMMGPIGEYWDQNEVLVELANGKKYYPKDQIELFSQLEEMKPFAKEAV ENSFAPYLKKYNSQVPHGVEMHCGITSGIETAHKITFKGDTFDSKSTIEFVDGDQEVTLN SLEYCKKMTENFTNLGKYTHQGMLLKKEVIEYVKNLACD

    No Results
No Results
No Results
IDSitePeptideScoreMethod
EHI_020250346 SFDSKSTIEF0.994unsp

EHI_020250      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India