EHI_024470 | proteasome subunit beta type 6 precursor, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_024470OTHER0.9738240.0251280.001048
No Results

  • Fasta :-

    >EHI_024470 MEFTHNAYQPISLGTTIIGVVYNGGVLLGADGRTSMGSIVVNRCKNKIRMVSDSIGMCTA GTAAHSETIGDYVKHALRMYTAQTGEEPTVLAAATSIKNIIYGNKSFLSSSVVCGGYDPV NGATLYRILQSGAMKQDDICVGGSGSTYIWGYCDAHFKKNMTFEEAKQFIVTAVSLAIYR DGSSGGIIHTVNITAEGVQSEFITGDKVPVPQN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_024470.fa Sequence name : EHI_024470 Sequence length : 213 VALUES OF COMPUTED PARAMETERS Coef20 : 3.556 CoefTot : -2.773 ChDiff : -1 ZoneTo : 66 KR : 5 DE : 3 CleavSite : 51 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.429 1.476 0.253 0.658 MesoH : -0.239 0.291 -0.237 0.220 MuHd_075 : 26.075 19.773 8.422 6.630 MuHd_095 : 30.972 27.544 11.176 7.373 MuHd_100 : 35.795 30.044 13.253 8.331 MuHd_105 : 39.689 31.386 13.573 8.677 Hmax_075 : 12.950 13.417 4.157 4.655 Hmax_095 : 15.400 23.300 5.208 6.210 Hmax_100 : 16.600 23.300 6.877 6.210 Hmax_105 : 6.300 15.487 3.396 3.412 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9359 0.0641 DFMC : 0.9541 0.0459
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 213 EHI_024470 MEFTHNAYQPISLGTTIIGVVYNGGVLLGADGRTSMGSIVVNRCKNKIRMVSDSIGMCTAGTAAHSETIGDYVKHALRMY 80 TAQTGEEPTVLAAATSIKNIIYGNKSFLSSSVVCGGYDPVNGATLYRILQSGAMKQDDICVGGSGSTYIWGYCDAHFKKN 160 MTFEEAKQFIVTAVSLAIYRDGSSGGIIHTVNITAEGVQSEFITGDKVPVPQN 240 ................................................................................ 80 ................................................................................ 160 ..................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_024470 33 LLGADGR|TS 0.086 . EHI_024470 43 GSIVVNR|CK 0.127 . EHI_024470 45 IVVNRCK|NK 0.062 . EHI_024470 47 VNRCKNK|IR 0.066 . EHI_024470 49 RCKNKIR|MV 0.267 . EHI_024470 74 TIGDYVK|HA 0.064 . EHI_024470 78 YVKHALR|MY 0.092 . EHI_024470 98 AAATSIK|NI 0.077 . EHI_024470 105 NIIYGNK|SF 0.063 . EHI_024470 127 NGATLYR|IL 0.088 . EHI_024470 135 LQSGAMK|QD 0.078 . EHI_024470 158 YCDAHFK|KN 0.064 . EHI_024470 159 CDAHFKK|NM 0.121 . EHI_024470 167 MTFEEAK|QF 0.064 . EHI_024470 180 VSLAIYR|DG 0.099 . EHI_024470 207 EFITGDK|VP 0.052 . ____________________________^_________________

  • Fasta :-

    >EHI_024470 ATGGAATTTACACATAATGCATATCAACCTATTTCACTTGGAACAACAATTATTGGAGTT GTTTATAATGGAGGTGTTCTTCTTGGAGCTGATGGTAGAACTTCAATGGGAAGTATAGTA GTTAATCGATGTAAAAATAAAATTCGTATGGTTTCTGATTCTATTGGAATGTGTACGGCT GGTACTGCAGCTCATAGTGAAACGATTGGAGATTATGTTAAACACGCATTAAGAATGTAT ACTGCACAAACTGGAGAAGAACCAACTGTACTTGCTGCTGCTACATCAATAAAAAATATC ATTTATGGAAATAAATCATTCCTTTCATCATCAGTTGTATGTGGTGGATATGATCCAGTG AATGGAGCAACATTATATCGTATACTTCAAAGTGGAGCTATGAAACAAGATGATATATGT GTTGGAGGAAGTGGTTCAACATATATTTGGGGGTATTGTGATGCTCATTTTAAAAAGAAT ATGACTTTTGAAGAAGCTAAACAATTTATTGTTACAGCTGTTTCACTAGCAATTTATCGT GATGGTTCATCAGGAGGAATTATCCATACCGTAAATATAACAGCAGAGGGTGTTCAGTCT GAATTTATCACTGGAGATAAAGTCCCTGTGCCACAAAATTAAATTACTATTTTTTGAAAC AAA
  • Download Fasta

  • Fasta :-

    MEFTHNAYQPISLGTTIIGVVYNGGVLLGADGRTSMGSIVVNRCKNKIRMVSDSIGMCTA GTAAHSETIGDYVKHALRMYTAQTGEEPTVLAAATSIKNIIYGNKSFLSSSVVCGGYDPV NGATLYRILQSGAMKQDDICVGGSGSTYIWGYCDAHFKKNMTFEEAKQFIVTAVSLAIYR DGSSGGIIHTVNITAEGVQSEFITGDKVPVPQN

  • title: active site
  • coordinates: T15,D31,R33,K47,S144,D181,S184,G185
IDSitePositionGscoreIscore
EHI_024470T2040.5010.079
IDSitePositionGscoreIscore
EHI_024470T2040.5010.079
IDSitePeptideScoreMethod
EHI_02447035 SDGRTSMGSI0.993unsp

EHI_024470      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India