EHI_024630 | glycoprotein endopeptidase, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_024630OTHER0.9999060.0000500.000044
No Results

  • Fasta :-

    >EHI_024630 MTKEEIKYILGIEGSANKLGVGIVTSNGEVLSNLRDSYYAPSGQGFLPRQLAEHHRNNIL RLVKEALEKAKLTPQQISLIAYTKGPGIAAPLMVCAVVARTLSIIWNIPLIGVNHCVAHI EMGMLATGAKHPVCLYVSGSNTQVIAFSLGKYRIFGETIDIAVGNCLDRFAREVMLPNEP APGYNIEQMAKKGKKYIKLPYVVKGMDISLTGLLTSIETYINKHESVEDLCYSLQETLFA MLVEVTERAMSQCSASEVLVVGGVGCNVRLQNMLKTMANERGATLGAMDERYCIDNGAMI AWTGYLMSKSGQFTPIEDATVHQRFRTDEVDVTWR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_024630.fa Sequence name : EHI_024630 Sequence length : 335 VALUES OF COMPUTED PARAMETERS Coef20 : 3.148 CoefTot : -0.113 ChDiff : 0 ZoneTo : 3 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.235 1.953 0.292 0.604 MesoH : 0.654 1.000 -0.033 0.426 MuHd_075 : 37.725 20.217 10.875 6.192 MuHd_095 : 15.114 12.413 4.768 4.738 MuHd_100 : 23.774 17.504 7.642 5.741 MuHd_105 : 23.961 18.832 8.099 5.238 Hmax_075 : 3.150 6.417 -0.783 3.150 Hmax_095 : 0.800 4.400 -1.413 2.840 Hmax_100 : 3.500 7.600 -0.566 3.530 Hmax_105 : 4.550 12.950 0.764 4.702 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9712 0.0288 DFMC : 0.9689 0.0311
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 335 EHI_024630 MTKEEIKYILGIEGSANKLGVGIVTSNGEVLSNLRDSYYAPSGQGFLPRQLAEHHRNNILRLVKEALEKAKLTPQQISLI 80 AYTKGPGIAAPLMVCAVVARTLSIIWNIPLIGVNHCVAHIEMGMLATGAKHPVCLYVSGSNTQVIAFSLGKYRIFGETID 160 IAVGNCLDRFAREVMLPNEPAPGYNIEQMAKKGKKYIKLPYVVKGMDISLTGLLTSIETYINKHESVEDLCYSLQETLFA 240 MLVEVTERAMSQCSASEVLVVGGVGCNVRLQNMLKTMANERGATLGAMDERYCIDNGAMIAWTGYLMSKSGQFTPIEDAT 320 VHQRFRTDEVDVTWR 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_024630 3 ----MTK|EE 0.062 . EHI_024630 7 MTKEEIK|YI 0.075 . EHI_024630 18 IEGSANK|LG 0.055 . EHI_024630 35 EVLSNLR|DS 0.075 . EHI_024630 49 GQGFLPR|QL 0.113 . EHI_024630 56 QLAEHHR|NN 0.087 . EHI_024630 61 HRNNILR|LV 0.191 . EHI_024630 64 NILRLVK|EA 0.095 . EHI_024630 69 VKEALEK|AK 0.057 . EHI_024630 71 EALEKAK|LT 0.072 . EHI_024630 84 SLIAYTK|GP 0.074 . EHI_024630 100 VCAVVAR|TL 0.127 . EHI_024630 130 MLATGAK|HP 0.060 . EHI_024630 151 IAFSLGK|YR 0.064 . EHI_024630 153 FSLGKYR|IF 0.110 . EHI_024630 169 VGNCLDR|FA 0.108 . EHI_024630 172 CLDRFAR|EV 0.273 . EHI_024630 191 NIEQMAK|KG 0.058 . EHI_024630 192 IEQMAKK|GK 0.096 . EHI_024630 194 QMAKKGK|KY 0.073 . EHI_024630 195 MAKKGKK|YI 0.098 . EHI_024630 198 KGKKYIK|LP 0.068 . EHI_024630 204 KLPYVVK|GM 0.074 . EHI_024630 223 IETYINK|HE 0.061 . EHI_024630 248 LVEVTER|AM 0.090 . EHI_024630 269 GVGCNVR|LQ 0.075 . EHI_024630 275 RLQNMLK|TM 0.062 . EHI_024630 281 KTMANER|GA 0.107 . EHI_024630 291 LGAMDER|YC 0.119 . EHI_024630 309 TGYLMSK|SG 0.066 . EHI_024630 324 DATVHQR|FR 0.102 . EHI_024630 326 TVHQRFR|TD 0.098 . EHI_024630 335 EVDVTWR|-- 0.084 . ____________________________^_________________

  • Fasta :-

    >EHI_024630 ATGACAAAAGAAGAAATTAAATATATTCTTGGGATTGAAGGAAGTGCTAACAAACTTGGT GTAGGAATTGTTACTTCAAATGGAGAAGTATTAAGTAATTTAAGAGATAGTTATTATGCT CCTTCAGGACAAGGATTTCTCCCAAGACAATTAGCTGAACATCACCGAAATAATATTTTA AGATTAGTTAAAGAGGCATTAGAAAAAGCAAAGCTAACACCACAACAAATTTCATTAATT GCTTACACTAAAGGACCAGGAATTGCTGCACCTTTAATGGTATGTGCTGTTGTAGCAAGA ACACTTTCAATCATATGGAATATTCCTTTAATAGGAGTGAATCATTGTGTTGCCCATATA GAAATGGGTATGTTAGCAACAGGAGCAAAACATCCAGTTTGTTTATATGTTTCAGGAAGT AATACACAAGTAATTGCATTTTCATTAGGTAAATATAGAATATTTGGAGAAACAATAGAT ATTGCTGTTGGTAATTGTTTAGATCGATTTGCACGAGAAGTTATGTTACCAAATGAACCA GCTCCTGGTTATAATATTGAACAAATGGCAAAAAAAGGAAAGAAATATATAAAATTACCT TATGTTGTTAAAGGAATGGATATTTCATTAACTGGATTATTAACTTCAATTGAAACATAT ATCAATAAACATGAAAGTGTTGAAGATCTTTGTTATTCTCTTCAAGAAACATTATTTGCT ATGTTAGTTGAAGTAACTGAAAGAGCAATGAGTCAATGTAGTGCTAGTGAAGTTCTTGTT GTAGGAGGAGTTGGATGTAATGTTAGATTACAAAATATGCTTAAAACAATGGCAAATGAA AGAGGAGCAACGTTAGGAGCAATGGATGAAAGGTACTGTATTGACAATGGAGCCATGATT GCATGGACAGGATATCTAATGTCTAAGAGTGGTCAGTTTACGCCTATAGAAGATGCAACA GTACATCAAAGATTTAGAACAGATGAAGTTGATGTTACATGGAGATAA
  • Download Fasta

  • Fasta :-

    MTKEEIKYILGIEGSANKLGVGIVTSNGEVLSNLRDSYYAPSGQGFLPRQLAEHHRNNIL RLVKEALEKAKLTPQQISLIAYTKGPGIAAPLMVCAVVARTLSIIWNIPLIGVNHCVAHI EMGMLATGAKHPVCLYVSGSNTQVIAFSLGKYRIFGETIDIAVGNCLDRFAREVMLPNEP APGYNIEQMAKKGKKYIKLPYVVKGMDISLTGLLTSIETYINKHESVEDLCYSLQETLFA MLVEVTERAMSQCSASEVLVVGGVGCNVRLQNMLKTMANERGATLGAMDERYCIDNGAMI AWTGYLMSKSGQFTPIEDATVHQRFRTDEVDVTWR

    No Results
  • title: nucleotide binding site
  • coordinates: E13,G14,S15,A16,K18,G20,H115,V137,S138,G139,S140
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_024630251 SERAMSQCSA0.996unspEHI_024630251 SERAMSQCSA0.996unspEHI_024630251 SERAMSQCSA0.996unspEHI_02463037 SNLRDSYYAP0.996unspEHI_024630226 SNKHESVEDL0.998unsp

EHI_024630      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India