EHI_029220 | peptidase S54 (rhomboid) family protein

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EHI_029220OTHER0.9996670.0002790.000054
No Results

  • Fasta :-

    >EHI_029220 MFLVCFNEITKYCQECIRNISFLSIVQLIIIWSIYFILPELGIEAKGFSPLMSRRDFIHQ IGPMLYHCFIHEGIFHLFGNSISLLVFGASVEKKIGTTQVILLFIVSIVLQPILMISLFS LKLASGNSVVGISGYIFTLIIIFYYQPGKYMDIVYCCVLNIITYIFSLLLLAQVSLSGHF CGIIIGVLYTRGFLDWLFNSRLITIIDTVIKRFIGCLIIYIPIPDNSINTKTHLQIMSLI KSDIKSLLSHCTKHSNDANTLNSLPI
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_029220.fa Sequence name : EHI_029220 Sequence length : 266 VALUES OF COMPUTED PARAMETERS Coef20 : 4.184 CoefTot : -0.012 ChDiff : 4 ZoneTo : 7 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.229 2.888 0.499 0.919 MesoH : 1.196 1.616 0.178 0.610 MuHd_075 : 8.437 3.068 0.730 1.636 MuHd_095 : 44.336 27.898 15.614 8.412 MuHd_100 : 48.575 28.654 16.370 9.284 MuHd_105 : 45.744 25.892 15.182 8.608 Hmax_075 : 1.400 11.500 0.865 2.730 Hmax_095 : 20.125 21.000 7.306 5.871 Hmax_100 : 19.600 22.100 8.214 6.540 Hmax_105 : 20.183 22.050 7.070 6.393 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8800 0.1200 DFMC : 0.9305 0.0695
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 266 EHI_029220 MFLVCFNEITKYCQECIRNISFLSIVQLIIIWSIYFILPELGIEAKGFSPLMSRRDFIHQIGPMLYHCFIHEGIFHLFGN 80 SISLLVFGASVEKKIGTTQVILLFIVSIVLQPILMISLFSLKLASGNSVVGISGYIFTLIIIFYYQPGKYMDIVYCCVLN 160 IITYIFSLLLLAQVSLSGHFCGIIIGVLYTRGFLDWLFNSRLITIIDTVIKRFIGCLIIYIPIPDNSINTKTHLQIMSLI 240 KSDIKSLLSHCTKHSNDANTLNSLPI 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .......................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_029220 11 CFNEITK|YC 0.063 . EHI_029220 18 YCQECIR|NI 0.077 . EHI_029220 46 ELGIEAK|GF 0.073 . EHI_029220 54 FSPLMSR|RD 0.071 . EHI_029220 55 SPLMSRR|DF 0.284 . EHI_029220 93 FGASVEK|KI 0.072 . EHI_029220 94 GASVEKK|IG 0.143 . EHI_029220 122 ISLFSLK|LA 0.061 . EHI_029220 149 FYYQPGK|YM 0.069 . EHI_029220 191 IGVLYTR|GF 0.087 . EHI_029220 201 DWLFNSR|LI 0.078 . EHI_029220 211 IIDTVIK|RF 0.059 . EHI_029220 212 IDTVIKR|FI 0.224 . EHI_029220 231 DNSINTK|TH 0.070 . EHI_029220 241 QIMSLIK|SD 0.087 . EHI_029220 245 LIKSDIK|SL 0.063 . EHI_029220 253 LLSHCTK|HS 0.078 . ____________________________^_________________

  • Fasta :-

    >EHI_029220 ATGTTTTTAGTGTGTTTTAATGAAATTACTAAATATTGCCAAGAGTGCATTAGAAACATT TCATTCTTAAGTATTGTTCAATTAATAATTATTTGGAGTATATATTTTATACTTCCTGAA CTAGGGATTGAAGCAAAAGGATTTTCTCCTTTAATGTCTCGACGTGATTTTATACATCAA ATTGGACCAATGTTATATCATTGTTTTATTCATGAAGGAATATTTCATTTATTTGGAAAT TCTATTTCATTACTTGTTTTTGGAGCATCAGTAGAAAAAAAAATTGGGACAACACAAGTT ATTTTATTATTTATTGTATCAATAGTACTTCAACCAATATTAATGATTTCGTTATTCTCA TTAAAACTTGCTTCAGGTAATTCTGTTGTTGGAATAAGTGGATATATATTTACATTAATT ATTATATTTTATTATCAACCAGGAAAATATATGGATATTGTTTATTGTTGTGTTTTAAAT ATCATAACTTATATCTTTTCTTTATTGTTATTAGCTCAAGTAAGTTTATCTGGTCATTTT TGTGGAATTATTATAGGAGTTTTATACACAAGAGGATTTCTTGATTGGTTATTTAATTCT CGTCTAATTACCATTATTGATACTGTGATTAAGAGATTCATTGGTTGTTTAATAATTTAT ATACCAATTCCAGATAATTCTATTAACACAAAAACTCATTTACAAATTATGTCATTAATC AAATCAGACATTAAATCATTACTATCTCATTGTACCAAACACTCAAATGATGCAAATACT CTAAATTCATTACCTATTTGA
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  • Fasta :-

    MFLVCFNEITKYCQECIRNISFLSIVQLIIIWSIYFILPELGIEAKGFSPLMSRRDFIHQ IGPMLYHCFIHEGIFHLFGNSISLLVFGASVEKKIGTTQVILLFIVSIVLQPILMISLFS LKLASGNSVVGISGYIFTLIIIFYYQPGKYMDIVYCCVLNIITYIFSLLLLAQVSLSGHF CGIIIGVLYTRGFLDWLFNSRLITIIDTVIKRFIGCLIIYIPIPDNSINTKTHLQIMSLI KSDIKSLLSHCTKHSNDANTLNSLPI

    No Results
No Results
No Results
IDSitePeptideScoreMethod
EHI_02922053 SSPLMSRRDF0.994unsp

EHI_029220      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India