EHI_033710 | cysteine proteinase 2

_IDPredictionOTHERSPmTPCS_Position
EHI_033710SP0.0114380.9883120.000250CS pos: 13-14. ASA-ID. Pr: 0.5773
No Results

  • Fasta :-

    >EHI_033710 MFAFICLLAIASAIDFNTWASKNNKHFTAIEKLRRRAIFNMNAKFVDSFNKIGSFKLSVD GPFAAMTNEEYRTLLKSKRTTEENGQVKYLNIQAPESVDWRKEGKVTPIRDQAQCGSCYT FGSLAALEGRLLIEKGGDANTLDLSEEHMVQCTRDNGNNGCNGGLGSNVYDYIIEHGVAK ESDYPYTGSDSTCKTNVKSFAKITGYTKVPRNNEAELKAALSQGLVDVSIDASSAKFQLY KSGAYTDTKCKNNYFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGDKGYINMVIEGNTC GVATDPLYPTGVQYL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_033710.fa Sequence name : EHI_033710 Sequence length : 315 VALUES OF COMPUTED PARAMETERS Coef20 : 4.855 CoefTot : 0.291 ChDiff : 0 ZoneTo : 46 KR : 7 DE : 2 CleavSite : 36 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.435 1.959 0.238 0.679 MesoH : -0.827 0.082 -0.431 0.161 MuHd_075 : 35.226 20.388 10.221 6.702 MuHd_095 : 29.125 20.470 8.341 6.950 MuHd_100 : 28.360 17.989 7.674 7.052 MuHd_105 : 31.423 20.295 8.483 8.131 Hmax_075 : 6.417 12.717 0.066 3.395 Hmax_095 : 0.262 9.275 -1.490 2.520 Hmax_100 : 4.700 7.800 -1.913 4.530 Hmax_105 : 5.000 8.000 -1.622 3.760 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6680 0.3320 DFMC : 0.6831 0.3169
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 315 EHI_033710 MFAFICLLAIASAIDFNTWASKNNKHFTAIEKLRRRAIFNMNAKFVDSFNKIGSFKLSVDGPFAAMTNEEYRTLLKSKRT 80 TEENGQVKYLNIQAPESVDWRKEGKVTPIRDQAQCGSCYTFGSLAALEGRLLIEKGGDANTLDLSEEHMVQCTRDNGNNG 160 CNGGLGSNVYDYIIEHGVAKESDYPYTGSDSTCKTNVKSFAKITGYTKVPRNNEAELKAALSQGLVDVSIDASSAKFQLY 240 KSGAYTDTKCKNNYFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGDKGYINMVIEGNTCGVATDPLYPTGVQYL 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ........................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_033710 22 FNTWASK|NN 0.058 . EHI_033710 25 WASKNNK|HF 0.088 . EHI_033710 32 HFTAIEK|LR 0.058 . EHI_033710 34 TAIEKLR|RR 0.085 . EHI_033710 35 AIEKLRR|RA 0.116 . EHI_033710 36 IEKLRRR|AI 0.135 . EHI_033710 44 IFNMNAK|FV 0.092 . EHI_033710 51 FVDSFNK|IG 0.060 . EHI_033710 56 NKIGSFK|LS 0.068 . EHI_033710 72 MTNEEYR|TL 0.103 . EHI_033710 76 EYRTLLK|SK 0.072 . EHI_033710 78 RTLLKSK|RT 0.069 . EHI_033710 79 TLLKSKR|TT 0.255 . EHI_033710 88 EENGQVK|YL 0.075 . EHI_033710 101 PESVDWR|KE 0.125 . EHI_033710 102 ESVDWRK|EG 0.068 . EHI_033710 105 DWRKEGK|VT 0.061 . EHI_033710 110 GKVTPIR|DQ 0.106 . EHI_033710 130 LAALEGR|LL 0.097 . EHI_033710 135 GRLLIEK|GG 0.063 . EHI_033710 154 HMVQCTR|DN 0.117 . EHI_033710 180 IEHGVAK|ES 0.072 . EHI_033710 194 GSDSTCK|TN 0.060 . EHI_033710 198 TCKTNVK|SF 0.081 . EHI_033710 202 NVKSFAK|IT 0.070 . EHI_033710 208 KITGYTK|VP 0.054 . EHI_033710 211 GYTKVPR|NN 0.120 . EHI_033710 218 NNEAELK|AA 0.065 . EHI_033710 236 IDASSAK|FQ 0.069 . EHI_033710 241 AKFQLYK|SG 0.070 . EHI_033710 249 GAYTDTK|CK 0.060 . EHI_033710 251 YTDTKCK|NN 0.064 . EHI_033710 272 YGVVDGK|EC 0.066 . EHI_033710 278 KECWIVR|NS 0.083 . EHI_033710 288 GTGWGDK|GY 0.062 . ____________________________^_________________

  • Fasta :-

    >EHI_033710 ATGTTTGCTTTTATTTGTTTACTTGCTATTGCAAGTGCTATTGATTTCAATACATGGGCT TCTAAAAACAATAAACACTTCACAGCAATTGAAAAGCTTAGAAGAAGAGCTATCTTCAAT ATGAATGCTAAATTCGTTGATAGTTTCAATAAAATTGGTTCATTCAAATTATCAGTAGAT GGACCATTTGCTGCTATGACTAATGAAGAATACAGAACTCTTCTTAAATCTAAAAGAACT ACTGAAGAAAATGGACAAGTTAAATATTTGAATATCCAAGCACCAGAATCAGTAGATTGG AGAAAAGAAGGAAAAGTAACTCCAATTAGAGATCAAGCACAATGCGGATCATGTTATACA TTTGGTTCACTTGCAGCTCTTGAAGGAAGATTATTAATTGAAAAAGGAGGTGATGCTAAT ACACTCGATCTTTCAGAAGAACATATGGTTCAATGCACAAGAGATAATGGAAATAATGGA TGTAATGGAGGACTTGGATCAAATGTCTATGATTACATTATTGAACACGGAGTTGCTAAA GAAAGTGATTATCCATACACTGGAAGTGATTCTACATGCAAAACTAATGTAAAATCATTT GCTAAAATTACTGGATATACTAAAGTCCCAAGAAACAATGAAGCTGAACTTAAAGCTGCA CTTTCACAAGGTCTTGTTGATGTTTCAATTGATGCATCATCTGCTAAATTCCAATTATAC AAGAGCGGAGCTTATACTGATACTAAATGCAAGAATAACTACTTTGCTTTGAATCACGAA GTTTGTGCTGTTGGATATGGTGTTGTTGATGGAAAAGAATGTTGGATAGTTAGAAACTCA TGGGGAACAGGATGGGGAGATAAAGGATACATTAATATGGTTATTGAAGGAAATACCTGT GGTGTTGCTACAGATCCACTTTATCCAACTGGCGTTCAATATCTTTGAATAATTCACTTC TAAACCACCTATTG
  • Download Fasta

  • Fasta :-

    MFAFICLLAIASAIDFNTWASKNNKHFTAIEKLRRRAIFNMNAKFVDSFNKIGSFKLSVD GPFAAMTNEEYRTLLKSKRTTEENGQVKYLNIQAPESVDWRKEGKVTPIRDQAQCGSCYT FGSLAALEGRLLIEKGGDANTLDLSEEHMVQCTRDNGNNGCNGGLGSNVYDYIIEHGVAK ESDYPYTGSDSTCKTNVKSFAKITGYTKVPRNNEAELKAALSQGLVDVSIDASSAKFQLY KSGAYTDTKCKNNYFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGDKGYINMVIEGNTC GVATDPLYPTGVQYL

  • title: active site
  • coordinates: Q112,C118,H259,N279
No Results
No Results
IDSitePeptideScoreMethod
EHI_03371077 STLLKSKRTT0.991unsp

EHI_033710      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India