EHI_035580 | Der1 family protein, putative

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_IDPredictionOTHERSPmTPCS_Position
EHI_035580OTHER0.9994250.0003730.000201
No Results

  • Fasta :-

    >EHI_035580 MEILNVFAGYPIITRTILIMIISLFVLMKVRIIHISQLSFDVDAILSGEIWRLVTPFLVY SDRFSIWFLFELLFISQALSQIEQTYRSWLHCLWVIFIGCSGILVLSFTFHFIGYVPGQL PLLFNSFSNFIIYLWSKQNREQRVVMFFIFVIPLVYFPWISLLLHVSFISEAINDIYGIF IGHVVYWLETVFPMYYNWKPLELPKFLYDLFIHPIHLEEEQNPNIELNEENQIEGQQLNE ENQIEGQQLNENDE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_035580.fa Sequence name : EHI_035580 Sequence length : 254 VALUES OF COMPUTED PARAMETERS Coef20 : 4.316 CoefTot : -0.177 ChDiff : -15 ZoneTo : 40 KR : 3 DE : 1 CleavSite : 41 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.441 2.600 0.582 0.968 MesoH : 0.938 1.264 -0.026 0.557 MuHd_075 : 28.743 26.717 8.881 8.450 MuHd_095 : 20.398 13.697 4.729 5.717 MuHd_100 : 25.381 11.276 5.673 4.897 MuHd_105 : 26.095 16.094 7.295 6.023 Hmax_075 : 20.500 27.400 5.276 8.520 Hmax_095 : 18.725 19.775 4.130 7.096 Hmax_100 : 21.700 18.500 4.431 7.680 Hmax_105 : 17.383 22.400 4.288 7.887 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3309 0.6691 DFMC : 0.5261 0.4739
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 254 EHI_035580 MEILNVFAGYPIITRTILIMIISLFVLMKVRIIHISQLSFDVDAILSGEIWRLVTPFLVYSDRFSIWFLFELLFISQALS 80 QIEQTYRSWLHCLWVIFIGCSGILVLSFTFHFIGYVPGQLPLLFNSFSNFIIYLWSKQNREQRVVMFFIFVIPLVYFPWI 160 SLLLHVSFISEAINDIYGIFIGHVVYWLETVFPMYYNWKPLELPKFLYDLFIHPIHLEEEQNPNIELNEENQIEGQQLNE 240 ENQIEGQQLNENDE 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .............. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_035580 15 GYPIITR|TI 0.073 . EHI_035580 29 SLFVLMK|VR 0.066 . EHI_035580 31 FVLMKVR|II 0.104 . EHI_035580 52 LSGEIWR|LV 0.118 . EHI_035580 63 FLVYSDR|FS 0.105 . EHI_035580 87 QIEQTYR|SW 0.125 . EHI_035580 137 IIYLWSK|QN 0.065 . EHI_035580 140 LWSKQNR|EQ 0.124 . EHI_035580 143 KQNREQR|VV 0.416 . EHI_035580 199 PMYYNWK|PL 0.061 . EHI_035580 205 KPLELPK|FL 0.073 . ____________________________^_________________

  • Fasta :-

    >EHI_035580 ATGGAAATTTTGAATGTCTTTGCTGGATATCCTATAATAACTCGAACCATTTTAATTATG ATTATAAGCCTTTTTGTGTTAATGAAAGTTCGAATAATTCATATCTCACAACTATCATTT GACGTTGATGCAATTCTTTCTGGTGAAATTTGGAGATTAGTTACACCATTTCTAGTGTAT TCTGATAGGTTTAGTATTTGGTTTTTATTTGAGCTTTTGTTTATCTCTCAGGCATTATCT CAAATTGAACAAACTTATAGAAGTTGGTTACATTGTTTATGGGTTATTTTTATAGGATGT TCAGGGATTTTAGTTTTGTCTTTTACATTTCATTTTATAGGTTATGTCCCAGGACAACTC CCTTTATTATTCAATTCATTTTCTAACTTTATAATTTATCTCTGGTCAAAACAAAATAGA GAACAAAGAGTCGTAATGTTCTTCATATTTGTTATACCTCTTGTATATTTCCCCTGGATT TCTCTATTACTTCATGTCTCCTTTATAAGTGAAGCTATTAACGACATTTATGGCATTTTT ATTGGTCATGTTGTTTATTGGTTAGAAACAGTGTTCCCAATGTACTATAACTGGAAACCA CTAGAATTACCAAAATTCTTGTATGACCTTTTCATTCATCCTATTCATCTAGAAGAAGAG CAAAACCCTAATATCGAACTCAATGAAGAAAATCAAATAGAAGGTCAACAACTCAATGAA GAAAATCAAATAGAAGGTCAACAACTTAATGAAAATGATGAATAA
  • Download Fasta

  • Fasta :-

    MEILNVFAGYPIITRTILIMIISLFVLMKVRIIHISQLSFDVDAILSGEIWRLVTPFLVY SDRFSIWFLFELLFISQALSQIEQTYRSWLHCLWVIFIGCSGILVLSFTFHFIGYVPGQL PLLFNSFSNFIIYLWSKQNREQRVVMFFIFVIPLVYFPWISLLLHVSFISEAINDIYGIF IGHVVYWLETVFPMYYNWKPLELPKFLYDLFIHPIHLEEEQNPNIELNEENQIEGQQLNE ENQIEGQQLNENDE

    No Results
No Results
No Results
IDSitePeptideScoreMethod
EHI_03558080 SSQALSQIEQ0.995unsp

EHI_035580      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India