EHI_037210 | hypothetical protein

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_IDPredictionOTHERSPmTPCS_Position
EHI_037210OTHER0.5740200.4238290.002150
No Results

  • Fasta :-

    >EHI_037210 MIWEIIAGATALIMVLSGIHLFTHQYEIVFYPTRHTLPSVEEITQTFQLPFELKEVSIFT NDNNTVYLYACLKEEPSKHITLLLFQSNAGSVLDRMEMAKKYYELCNVNFVIAVYRGFDK STGIPEEVTMNNDVEKYFDSLESLGVDMNNIVVIGRSIGASMALKLYNKKNCKGLIIENG FTTLLDVGKILMPAISFFPWLIKDKWDNLNEIKHVQKGKRILFCSSGQDEMVPPSMMQHL YDVAHETGKKVRMEKFAKGFHMNLPSYPEYFKKLNKFFEELTKETMEEGIIENQEVQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_037210.fa Sequence name : EHI_037210 Sequence length : 297 VALUES OF COMPUTED PARAMETERS Coef20 : 4.255 CoefTot : -1.388 ChDiff : -7 ZoneTo : 40 KR : 1 DE : 2 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.941 2.082 0.314 0.755 MesoH : -0.313 0.464 -0.358 0.279 MuHd_075 : 16.537 16.195 6.373 4.222 MuHd_095 : 25.108 19.998 8.449 4.857 MuHd_100 : 28.361 18.922 9.380 5.475 MuHd_105 : 29.389 24.319 8.939 6.261 Hmax_075 : 9.217 19.400 -0.047 3.617 Hmax_095 : 10.500 10.412 0.471 4.427 Hmax_100 : 14.800 27.400 2.237 5.590 Hmax_105 : 5.950 23.363 1.994 7.525 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9893 0.0107 DFMC : 0.9808 0.0192
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 297 EHI_037210 MIWEIIAGATALIMVLSGIHLFTHQYEIVFYPTRHTLPSVEEITQTFQLPFELKEVSIFTNDNNTVYLYACLKEEPSKHI 80 TLLLFQSNAGSVLDRMEMAKKYYELCNVNFVIAVYRGFDKSTGIPEEVTMNNDVEKYFDSLESLGVDMNNIVVIGRSIGA 160 SMALKLYNKKNCKGLIIENGFTTLLDVGKILMPAISFFPWLIKDKWDNLNEIKHVQKGKRILFCSSGQDEMVPPSMMQHL 240 YDVAHETGKKVRMEKFAKGFHMNLPSYPEYFKKLNKFFEELTKETMEEGIIENQEVQ 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ......................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_037210 34 IVFYPTR|HT 0.087 . EHI_037210 54 QLPFELK|EV 0.076 . EHI_037210 73 YLYACLK|EE 0.054 . EHI_037210 78 LKEEPSK|HI 0.072 . EHI_037210 95 AGSVLDR|ME 0.112 . EHI_037210 100 DRMEMAK|KY 0.068 . EHI_037210 101 RMEMAKK|YY 0.104 . EHI_037210 116 FVIAVYR|GF 0.121 . EHI_037210 120 VYRGFDK|ST 0.099 . EHI_037210 136 MNNDVEK|YF 0.089 . EHI_037210 156 NIVVIGR|SI 0.198 . EHI_037210 165 GASMALK|LY 0.066 . EHI_037210 169 ALKLYNK|KN 0.064 . EHI_037210 170 LKLYNKK|NC 0.075 . EHI_037210 173 YNKKNCK|GL 0.074 . EHI_037210 189 TLLDVGK|IL 0.075 . EHI_037210 203 FFPWLIK|DK 0.071 . EHI_037210 205 PWLIKDK|WD 0.060 . EHI_037210 213 DNLNEIK|HV 0.078 . EHI_037210 217 EIKHVQK|GK 0.071 . EHI_037210 219 KHVQKGK|RI 0.065 . EHI_037210 220 HVQKGKR|IL 0.195 . EHI_037210 249 VAHETGK|KV 0.080 . EHI_037210 250 AHETGKK|VR 0.071 . EHI_037210 252 ETGKKVR|ME 0.091 . EHI_037210 255 KKVRMEK|FA 0.195 . EHI_037210 258 RMEKFAK|GF 0.087 . EHI_037210 272 SYPEYFK|KL 0.059 . EHI_037210 273 YPEYFKK|LN 0.100 . EHI_037210 276 YFKKLNK|FF 0.066 . EHI_037210 283 FFEELTK|ET 0.061 . ____________________________^_________________

  • Fasta :-

    >EHI_037210 ATGATTTGGGAGATTATTGCAGGAGCCACAGCTCTAATAATGGTATTAAGTGGAATACAT TTATTTACTCATCAATATGAAATAGTTTTCTATCCTACTCGTCATACATTACCAAGTGTT GAAGAAATAACACAAACCTTCCAACTCCCATTTGAATTAAAAGAAGTTTCAATTTTTACA AATGATAATAATACTGTTTATTTATATGCATGTTTAAAAGAAGAGCCATCAAAACACATA ACATTATTATTATTTCAAAGTAATGCTGGGAGTGTTTTAGATAGAATGGAAATGGCTAAA AAATATTATGAATTATGTAACGTAAATTTTGTTATTGCAGTATATCGAGGGTTTGATAAA TCGACAGGGATTCCAGAAGAAGTAACAATGAATAATGATGTTGAAAAATATTTTGATTCA TTAGAGTCACTTGGAGTTGATATGAATAATATTGTTGTTATTGGAAGATCAATTGGAGCA TCAATGGCATTAAAATTGTATAATAAAAAAAATTGTAAAGGATTAATTATTGAAAATGGA TTTACAACACTTCTTGATGTTGGTAAAATATTAATGCCAGCTATTAGTTTCTTTCCTTGG TTAATTAAAGATAAATGGGATAATTTAAATGAAATTAAACATGTACAAAAAGGAAAAAGA ATTTTATTTTGTAGTAGTGGTCAAGATGAAATGGTCCCACCATCAATGATGCAACACCTT TATGATGTTGCTCATGAAACAGGGAAAAAAGTAAGAATGGAAAAATTTGCAAAAGGATTT CATATGAATTTACCAAGTTATCCTGAATATTTTAAAAAATTAAATAAATTTTTTGAAGAA CTTACAAAGGAAACAATGGAAGAAGGGATAATAGAAAATCAAGAAGTACAGTAG
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  • Fasta :-

    MIWEIIAGATALIMVLSGIHLFTHQYEIVFYPTRHTLPSVEEITQTFQLPFELKEVSIFT NDNNTVYLYACLKEEPSKHITLLLFQSNAGSVLDRMEMAKKYYELCNVNFVIAVYRGFDK STGIPEEVTMNNDVEKYFDSLESLGVDMNNIVVIGRSIGASMALKLYNKKNCKGLIIENG FTTLLDVGKILMPAISFFPWLIKDKWDNLNEIKHVQKGKRILFCSSGQDEMVPPSMMQHL YDVAHETGKKVRMEKFAKGFHMNLPSYPEYFKKLNKFFEELTKETMEEGIIENQEVQ

    No Results
No Results
No Results
IDSitePeptideScoreMethod
EHI_03721039 SHTLPSVEEI0.995unsp

EHI_037210      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India