EHI_038330 | zinc finger domain containing protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003674      

  • Computed_GO_Functions:  molecular_function      

  • Computed_GO_Process_IDs:  GO:0008150      

  • Computed_GO_Processes:  biological_process      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EHI_038330OTHER0.9999810.0000090.000010
No Results

  • Fasta :-

    >EHI_038330 MEQPQHNSLSMIEQLQNKNSNNSISTIEEKEETQDNQKEIPEEKEEKTEDVEKSTKETGQ NQFECLICLDTAQNAVVTQCGHMFCWECLREWLTRQETCPICKSKVTVDSVIPIYNSTTT NDPRGAPRPQGHYTQPPPAPQPNPFLPFFPGGVGGNIATFAIGFGFPGMFNVNVFGGNVP QEQLTPEQIQQRKFQKYLILAFALLPLVIRIIAFLFC
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_038330.fa Sequence name : EHI_038330 Sequence length : 217 VALUES OF COMPUTED PARAMETERS Coef20 : 3.134 CoefTot : 0.000 ChDiff : -8 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.724 2.712 0.401 0.828 MesoH : 0.191 0.679 -0.218 0.385 MuHd_075 : 23.615 11.500 5.809 3.346 MuHd_095 : 31.222 20.019 10.214 5.688 MuHd_100 : 29.037 21.442 9.171 5.733 MuHd_105 : 19.947 18.474 6.203 4.550 Hmax_075 : 3.617 1.983 -2.759 1.120 Hmax_095 : 9.000 6.200 -0.518 2.870 Hmax_100 : 9.000 6.200 -0.518 2.870 Hmax_105 : 0.400 6.200 -2.022 2.470 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9927 0.0073 DFMC : 0.9935 0.0065
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 217 EHI_038330 MEQPQHNSLSMIEQLQNKNSNNSISTIEEKEETQDNQKEIPEEKEEKTEDVEKSTKETGQNQFECLICLDTAQNAVVTQC 80 GHMFCWECLREWLTRQETCPICKSKVTVDSVIPIYNSTTTNDPRGAPRPQGHYTQPPPAPQPNPFLPFFPGGVGGNIATF 160 AIGFGFPGMFNVNVFGGNVPQEQLTPEQIQQRKFQKYLILAFALLPLVIRIIAFLFC 240 ................................................................................ 80 ................................................................................ 160 ......................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_038330 18 IEQLQNK|NS 0.065 . EHI_038330 30 ISTIEEK|EE 0.058 . EHI_038330 38 ETQDNQK|EI 0.060 . EHI_038330 44 KEIPEEK|EE 0.057 . EHI_038330 47 PEEKEEK|TE 0.062 . EHI_038330 53 KTEDVEK|ST 0.081 . EHI_038330 56 DVEKSTK|ET 0.075 . EHI_038330 90 FCWECLR|EW 0.073 . EHI_038330 95 LREWLTR|QE 0.086 . EHI_038330 103 ETCPICK|SK 0.072 . EHI_038330 105 CPICKSK|VT 0.071 . EHI_038330 124 TTTNDPR|GA 0.106 . EHI_038330 128 DPRGAPR|PQ 0.116 . EHI_038330 192 PEQIQQR|KF 0.095 . EHI_038330 193 EQIQQRK|FQ 0.081 . EHI_038330 196 QQRKFQK|YL 0.079 . EHI_038330 210 LLPLVIR|II 0.075 . ____________________________^_________________

  • Fasta :-

    >EHI_038330 ATCAAAATAAATTCATCACCATCTTTTATTTTAAAAATAATTGTTTATAAAGAATGGAAC AACCTCAACACAATTCACTTAGTATGATAGAACAATTACAAAATAAGAATAGCAATAATT CTATTAGTACTATTGAAGAAAAAGAAGAAACACAAGACAACCAAAAAGAAATACCGGAAG AAAAAGAAGAAAAAACTGAAGATGTAGAAAAGTCAACGAAAGAAACGGGGCAAAACCAAT TTGAATGTTTGATTTGTCTTGACACAGCACAAAATGCAGTTGTTACACAATGTGGACATA TGTTTTGTTGGGAATGTTTACGAGAATGGCTTACTCGACAAGAGACATGCCCTATTTGTA AATCAAAAGTTACAGTTGATTCAGTTATTCCAATATACAATTCTACAACCACAAACGACC CACGTGGAGCACCTCGTCCTCAAGGACATTATACTCAACCACCACCTGCTCCTCAGCCAA ACCCATTTTTACCATTTTTTCCTGGTGGAGTTGGTGGGAATATAGCAACTTTTGCCATTG GATTTGGATTTCCTGGGATGTTTAATGTTAATGTTTTTGGAGGTAATGTGCCTCAAGAAC AATTAACGCCAGAACAAATACAACAAAGAAAATTCCAAAAATACCTTATTTTAGCATTTG CTCTACTTCCATTAGTAATTCGAATTATCGCATTCCTCTTCTGTTAAGAAGAGTCAAAAA TTAATGGCATGTTTTATATCGTCCAAATGGCAGTATTTAGTTACAACGAAGTTTTAATTC TGGGTTTATTTTTTTAAATGAAATATAACAGAACCAACCAAACCAATTTCATAGTCTGAT GCTTTCAATGTTTGTATTGAGAGTTTTTGGTAAGGGGATATTAAACAAAGTCAATTAGTT TAATTACTGTTAGTGAATTTTATATTGTTGTAGATAAATGTTTGGTGAGTGTTTTCTTTT ATGTAAACCATGCATCTGATCAATTTTTATTTTCAAATAGCCAAATCACTTCAATTAACA TTGTTTTTTGTTATAAATAAAAATTAGAGTTTAAATAGCCAACTTACCTTTTAATTTTAT GGGTTATTTGTTGATGAAAAATAATATAATAATACTTGATATTTATTACCTTGGAATATA TTGTACCTAATGCTTTATAACTAACATTATACTTTATTAATTATGTAATGTGCTATTCCA ATATAAAAATTAGTGTTTTTGTTTTTATTCTCTTCAATAAATACACTGTG
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  • Fasta :-

    MEQPQHNSLSMIEQLQNKNSNNSISTIEEKEETQDNQKEIPEEKEEKTEDVEKSTKETGQ NQFECLICLDTAQNAVVTQCGHMFCWECLREWLTRQETCPICKSKVTVDSVIPIYNSTTT NDPRGAPRPQGHYTQPPPAPQPNPFLPFFPGGVGGNIATFAIGFGFPGMFNVNVFGGNVP QEQLTPEQIQQRKFQKYLILAFALLPLVIRIIAFLFC

  • title: Zn binding site
  • coordinates: C65,C68,C80,H82,C85,C88,C99,C102
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
EHI_038330T1340.6730.111EHI_038330T1190.5680.031EHI_038330T1200.5390.074EHI_038330T1180.5170.025
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
EHI_038330T1340.6730.111EHI_038330T1190.5680.031EHI_038330T1200.5390.074EHI_038330T1180.5170.025
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_03833025 SNNSISTIEE0.992unspEHI_03833054 SDVEKSTKET0.998unsp

EHI_038330      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India