EHI_049330 | proteasome subunit beta type 3, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_049330OTHER0.9981700.0017170.000113
No Results

  • Fasta :-

    >EHI_049330 MGDDISYYSGGAVVGMAGKGCVAIAADNRYGLKYQFASANFHKVFQVNKYCLFGGAGLFS DVQTMAEKVKYHANLYRLREGHDIGPEQLLNSTAHMLYKKRFQPYYMSPIIAGIDDNGNS YVCSYDYIGSPEISQVGCVGTGSNELMGMCDSFYKEGMEPEELVEAVGQCLLAAENRDAF SGWGVEVYLLTRDNLTIYNMKPRQD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_049330.fa Sequence name : EHI_049330 Sequence length : 205 VALUES OF COMPUTED PARAMETERS Coef20 : 2.824 CoefTot : -0.250 ChDiff : -7 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.206 1.447 0.248 0.566 MesoH : -0.583 0.134 -0.333 0.207 MuHd_075 : 20.044 5.879 3.927 1.851 MuHd_095 : 22.012 16.569 4.949 3.101 MuHd_100 : 19.297 12.133 3.979 2.109 MuHd_105 : 15.152 5.733 3.221 1.957 Hmax_075 : 13.650 10.500 2.367 4.573 Hmax_095 : 15.138 13.038 2.417 4.655 Hmax_100 : 15.700 13.100 2.272 4.700 Hmax_105 : 12.900 10.400 2.017 4.013 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9853 0.0147 DFMC : 0.9878 0.0122
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 205 EHI_049330 MGDDISYYSGGAVVGMAGKGCVAIAADNRYGLKYQFASANFHKVFQVNKYCLFGGAGLFSDVQTMAEKVKYHANLYRLRE 80 GHDIGPEQLLNSTAHMLYKKRFQPYYMSPIIAGIDDNGNSYVCSYDYIGSPEISQVGCVGTGSNELMGMCDSFYKEGMEP 160 EELVEAVGQCLLAAENRDAFSGWGVEVYLLTRDNLTIYNMKPRQD 240 ................................................................................ 80 ................................................................................ 160 ............................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_049330 19 VVGMAGK|GC 0.060 . EHI_049330 29 AIAADNR|YG 0.086 . EHI_049330 33 DNRYGLK|YQ 0.066 . EHI_049330 43 ASANFHK|VF 0.067 . EHI_049330 49 KVFQVNK|YC 0.067 . EHI_049330 68 VQTMAEK|VK 0.056 . EHI_049330 70 TMAEKVK|YH 0.067 . EHI_049330 77 YHANLYR|LR 0.091 . EHI_049330 79 ANLYRLR|EG 0.093 . EHI_049330 99 TAHMLYK|KR 0.070 . EHI_049330 100 AHMLYKK|RF 0.091 . EHI_049330 101 HMLYKKR|FQ 0.151 . EHI_049330 155 MCDSFYK|EG 0.058 . EHI_049330 177 LLAAENR|DA 0.156 . EHI_049330 192 EVYLLTR|DN 0.086 . EHI_049330 201 LTIYNMK|PR 0.062 . EHI_049330 203 IYNMKPR|QD 0.117 . ____________________________^_________________

  • Fasta :-

    >EHI_049330 ATGGGAGATGATATTTCATATTATAGTGGAGGAGCTGTTGTTGGAATGGCAGGAAAAGGA TGTGTTGCGATCGCTGCAGATAATCGATATGGATTGAAGTATCAATTTGCATCAGCCAAT TTTCATAAAGTATTTCAAGTAAATAAATATTGTTTATTTGGAGGAGCAGGATTATTTTCT GATGTACAAACAATGGCTGAAAAAGTCAAATATCATGCAAATTTATATCGACTAAGAGAA GGACATGACATCGGACCAGAACAATTATTAAATTCAACTGCTCATATGTTATATAAAAAA AGATTCCAACCATATTATATGTCACCTATTATAGCTGGTATTGATGATAATGGAAATTCT TATGTATGCAGTTATGATTATATTGGTTCTCCTGAAATTTCACAAGTTGGTTGTGTTGGT ACAGGAAGTAATGAATTAATGGGAATGTGTGATTCTTTCTATAAAGAAGGCATGGAACCA GAAGAATTAGTAGAAGCTGTTGGTCAATGTCTTCTTGCCGCAGAAAATAGAGATGCATTT TCTGGATGGGGTGTAGAAGTTTATTTATTAACTCGTGATAATTTGACAATTTACAATATG AAACCAAGACAAGACTAATTCCATTTTTTAATTGTTA
  • Download Fasta

  • Fasta :-

    MGDDISYYSGGAVVGMAGKGCVAIAADNRYGLKYQFASANFHKVFQVNKYCLFGGAGLFS DVQTMAEKVKYHANLYRLREGHDIGPEQLLNSTAHMLYKKRFQPYYMSPIIAGIDDNGNS YVCSYDYIGSPEISQVGCVGTGSNELMGMCDSFYKEGMEPEELVEAVGQCLLAAENRDAF SGWGVEVYLLTRDNLTIYNMKPRQD

  • title: active site
  • coordinates: G11,D27,R29,K43,T141,D178,S181,G182
No Results
No Results
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EHI_049330      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India