EHI_049540 | ubiquitin carboxyl-terminal hydrolase domain containing protein

_IDPredictionOTHERSPmTPCS_Position
EHI_049540OTHER0.9972510.0001530.002595
No Results

  • Fasta :-

    >EHI_049540 MSKYVGRLFSPRDDHVKKFFSNYPICGIRNLGNTCFISSVLQSLANTQQIRSYCFHHYNP IKGRAGDKSVYHGSLLNAFINLTNAIWSGNYRFVTSLAIKDIVSETHPQYEGKDQNDAHE FLLIFLEMLENELNTKDINNFSSSISPLLLTPIPCRGTIKTYSHENSPSKIYYSPFEVEM NETESDDSSSDSYFSKNLISDVFKGRIKRVTECSMCHYSSDIFEEFISLSVPVPQWYSNE AHPISLESCIELFLHYENIDDWYCEKCNKKRKAKIYSTISDIPKVLIIQLVRIYSKKYPI QQVLFPLNDLVVQTSPNHFDFYDLYSFITHTGSLSKGHYISWNKVSNQWYCCNDENVSQG NPTTSSDTVYILFYKRKVS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_049540.fa Sequence name : EHI_049540 Sequence length : 379 VALUES OF COMPUTED PARAMETERS Coef20 : 3.745 CoefTot : -0.157 ChDiff : -3 ZoneTo : 12 KR : 3 DE : 0 CleavSite : 17 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.871 1.318 0.129 0.478 MesoH : -0.533 0.125 -0.388 0.189 MuHd_075 : 44.627 16.061 10.479 8.466 MuHd_095 : 33.095 25.504 9.641 7.553 MuHd_100 : 38.283 25.897 10.593 7.935 MuHd_105 : 31.717 19.838 8.266 6.187 Hmax_075 : 5.133 1.633 -2.032 2.053 Hmax_095 : 2.100 11.100 -0.507 2.900 Hmax_100 : 3.400 11.600 -0.240 2.460 Hmax_105 : -2.100 6.500 -0.979 1.420 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4492 0.5508 DFMC : 0.5891 0.4109
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 379 EHI_049540 MSKYVGRLFSPRDDHVKKFFSNYPICGIRNLGNTCFISSVLQSLANTQQIRSYCFHHYNPIKGRAGDKSVYHGSLLNAFI 80 NLTNAIWSGNYRFVTSLAIKDIVSETHPQYEGKDQNDAHEFLLIFLEMLENELNTKDINNFSSSISPLLLTPIPCRGTIK 160 TYSHENSPSKIYYSPFEVEMNETESDDSSSDSYFSKNLISDVFKGRIKRVTECSMCHYSSDIFEEFISLSVPVPQWYSNE 240 AHPISLESCIELFLHYENIDDWYCEKCNKKRKAKIYSTISDIPKVLIIQLVRIYSKKYPIQQVLFPLNDLVVQTSPNHFD 320 FYDLYSFITHTGSLSKGHYISWNKVSNQWYCCNDENVSQGNPTTSSDTVYILFYKRKVS 400 ................................................................................ 80 ................................................................................ 160 ................................................P............................... 240 ................................................................................ 320 ........................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ EHI_049540 3 ----MSK|YV 0.088 . EHI_049540 7 MSKYVGR|LF 0.119 . EHI_049540 12 GRLFSPR|DD 0.132 . EHI_049540 17 PRDDHVK|KF 0.066 . EHI_049540 18 RDDHVKK|FF 0.150 . EHI_049540 29 YPICGIR|NL 0.086 . EHI_049540 51 ANTQQIR|SY 0.111 . EHI_049540 62 HHYNPIK|GR 0.065 . EHI_049540 64 YNPIKGR|AG 0.128 . EHI_049540 68 KGRAGDK|SV 0.099 . EHI_049540 92 IWSGNYR|FV 0.139 . EHI_049540 100 VTSLAIK|DI 0.073 . EHI_049540 113 HPQYEGK|DQ 0.093 . EHI_049540 136 ENELNTK|DI 0.065 . EHI_049540 156 LTPIPCR|GT 0.092 . EHI_049540 160 PCRGTIK|TY 0.067 . EHI_049540 170 HENSPSK|IY 0.064 . EHI_049540 196 SDSYFSK|NL 0.075 . EHI_049540 204 LISDVFK|GR 0.073 . EHI_049540 206 SDVFKGR|IK 0.107 . EHI_049540 208 VFKGRIK|RV 0.064 . EHI_049540 209 FKGRIKR|VT 0.641 *ProP* EHI_049540 266 DDWYCEK|CN 0.056 . EHI_049540 269 YCEKCNK|KR 0.058 . EHI_049540 270 CEKCNKK|RK 0.093 . EHI_049540 271 EKCNKKR|KA 0.218 . EHI_049540 272 KCNKKRK|AK 0.114 . EHI_049540 274 NKKRKAK|IY 0.261 . EHI_049540 284 TISDIPK|VL 0.079 . EHI_049540 292 LIIQLVR|IY 0.095 . EHI_049540 296 LVRIYSK|KY 0.061 . EHI_049540 297 VRIYSKK|YP 0.143 . EHI_049540 336 HTGSLSK|GH 0.060 . EHI_049540 344 HYISWNK|VS 0.055 . EHI_049540 375 VYILFYK|RK 0.055 . EHI_049540 376 YILFYKR|KV 0.206 . EHI_049540 377 ILFYKRK|VS 0.090 . ____________________________^_________________

  • Fasta :-

    >EHI_049540 ATGAGTAAATATGTGGGAAGATTATTCTCCCCTCGTGATGACCATGTCAAGAAATTCTTT TCAAATTATCCAATTTGTGGAATTAGAAATTTAGGAAATACTTGTTTTATAAGTTCAGTT TTACAATCTCTAGCTAACACCCAACAAATTCGGTCGTATTGTTTTCATCACTACAACCCA ATTAAAGGAAGAGCAGGAGATAAGTCAGTATATCATGGCTCTCTTCTAAACGCATTTATC AATTTAACAAATGCCATCTGGTCAGGAAACTATAGATTTGTAACTTCTTTAGCAATCAAA GACATTGTATCAGAAACACATCCACAGTATGAAGGAAAGGATCAAAATGATGCACATGAA TTTTTATTAATCTTTCTTGAAATGTTAGAAAACGAATTAAACACAAAAGATATAAATAAT TTCTCTTCTTCTATTTCACCACTCCTTCTCACACCAATTCCTTGTAGAGGAACAATAAAG ACATATTCTCATGAAAATTCTCCTTCAAAAATATATTATTCTCCATTTGAAGTTGAAATG AATGAGACTGAATCTGATGACTCATCTTCAGACTCTTATTTTTCAAAAAATCTTATTAGT GATGTTTTTAAAGGAAGAATTAAACGTGTAACTGAATGTTCAATGTGTCATTATAGCTCA GATATTTTTGAGGAATTTATTTCTTTATCAGTTCCAGTACCTCAATGGTATTCAAATGAA GCACATCCAATCTCATTAGAGAGTTGTATTGAATTATTTCTTCACTATGAAAATATAGAT GATTGGTATTGTGAAAAATGCAACAAAAAAAGAAAGGCTAAAATATATTCAACTATCAGT GATATTCCTAAAGTTTTAATCATTCAATTGGTTAGAATATACTCAAAGAAATACCCAATT CAACAAGTTTTGTTTCCTTTAAATGATTTAGTAGTTCAAACATCCCCTAACCATTTCGAC TTTTATGATTTATATTCTTTTATCACTCATACAGGATCATTATCAAAAGGTCATTACATA TCATGGAATAAAGTATCAAACCAATGGTACTGTTGCAACGATGAAAATGTCTCTCAAGGT AACCCTACCACATCATCTGATACTGTGTACATTCTTTTTTATAAAAGGAAAGTAAGTTGA
  • Download Fasta

  • Fasta :-

    MSKYVGRLFSPRDDHVKKFFSNYPICGIRNLGNTCFISSVLQSLANTQQIRSYCFHHYNP IKGRAGDKSVYHGSLLNAFINLTNAIWSGNYRFVTSLAIKDIVSETHPQYEGKDQNDAHE FLLIFLEMLENELNTKDINNFSSSISPLLLTPIPCRGTIKTYSHENSPSKIYYSPFEVEM NETESDDSSSDSYFSKNLISDVFKGRIKRVTECSMCHYSSDIFEEFISLSVPVPQWYSNE AHPISLESCIELFLHYENIDDWYCEKCNKKRKAKIYSTISDIPKVLIIQLVRIYSKKYPI QQVLFPLNDLVVQTSPNHFDFYDLYSFITHTGSLSKGHYISWNKVSNQWYCCNDENVSQG NPTTSSDTVYILFYKRKVS

  • title: Active Site
  • coordinates: N30,C35,H338,D354
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_049540188 SESDDSSSDS0.998unspEHI_049540188 SESDDSSSDS0.998unspEHI_049540188 SESDDSSSDS0.998unspEHI_04954010 SGRLFSPRDD0.997unspEHI_049540163 SIKTYSHENS0.995unsp

EHI_049540      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India