EHI_052140 | proteasome subunit alpha type 2-A, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_052140OTHER0.9998570.0001230.000019
No Results

  • Fasta :-

    >EHI_052140 MEGGEDDYGFSLTTFSPSGKLVQIEYALNAISAGSTSVGIKAKDGIVLAVEKSLPPMYIS ESIQKINHLCDSVGMVSSGMGPDARVLVKKGRKEGQKYWLEYQEDINCSMMTRKLAYLMQ EYTQKGGVRPFGVSVLVAGFDGKTPRLYQVDPSGSFWTWKATALGKNMTSVKTFLEKRYH DDIELEDAIHTAILALKEGFEGEMNEHNIEIGLCTKENGFKVLTPSEIRDYLDIAN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_052140.fa Sequence name : EHI_052140 Sequence length : 236 VALUES OF COMPUTED PARAMETERS Coef20 : 2.762 CoefTot : 0.000 ChDiff : -6 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.653 0.918 0.007 0.439 MesoH : -0.241 0.385 -0.295 0.240 MuHd_075 : 18.542 6.379 4.887 2.129 MuHd_095 : 17.182 9.991 4.947 2.744 MuHd_100 : 16.528 9.321 4.082 2.481 MuHd_105 : 12.821 5.421 2.557 1.516 Hmax_075 : 5.700 3.383 -0.096 3.185 Hmax_095 : 11.400 5.200 0.722 3.320 Hmax_100 : 11.400 5.200 0.722 3.320 Hmax_105 : 0.525 -0.200 -2.001 2.200 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9852 0.0148 DFMC : 0.9633 0.0367
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 236 EHI_052140 MEGGEDDYGFSLTTFSPSGKLVQIEYALNAISAGSTSVGIKAKDGIVLAVEKSLPPMYISESIQKINHLCDSVGMVSSGM 80 GPDARVLVKKGRKEGQKYWLEYQEDINCSMMTRKLAYLMQEYTQKGGVRPFGVSVLVAGFDGKTPRLYQVDPSGSFWTWK 160 ATALGKNMTSVKTFLEKRYHDDIELEDAIHTAILALKEGFEGEMNEHNIEIGLCTKENGFKVLTPSEIRDYLDIAN 240 ................................................................................ 80 ................................................................................ 160 ............................................................................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_052140 20 TFSPSGK|LV 0.084 . EHI_052140 41 STSVGIK|AK 0.081 . EHI_052140 43 SVGIKAK|DG 0.075 . EHI_052140 52 IVLAVEK|SL 0.070 . EHI_052140 65 ISESIQK|IN 0.058 . EHI_052140 85 GMGPDAR|VL 0.100 . EHI_052140 89 DARVLVK|KG 0.064 . EHI_052140 90 ARVLVKK|GR 0.154 . EHI_052140 92 VLVKKGR|KE 0.118 . EHI_052140 93 LVKKGRK|EG 0.066 . EHI_052140 97 GRKEGQK|YW 0.075 . EHI_052140 113 NCSMMTR|KL 0.087 . EHI_052140 114 CSMMTRK|LA 0.093 . EHI_052140 125 MQEYTQK|GG 0.060 . EHI_052140 129 TQKGGVR|PF 0.109 . EHI_052140 143 VAGFDGK|TP 0.058 . EHI_052140 146 FDGKTPR|LY 0.089 . EHI_052140 160 GSFWTWK|AT 0.080 . EHI_052140 166 KATALGK|NM 0.059 . EHI_052140 172 KNMTSVK|TF 0.062 . EHI_052140 177 VKTFLEK|RY 0.062 . EHI_052140 178 KTFLEKR|YH 0.232 . EHI_052140 197 TAILALK|EG 0.073 . EHI_052140 216 EIGLCTK|EN 0.063 . EHI_052140 221 TKENGFK|VL 0.067 . EHI_052140 229 LTPSEIR|DY 0.083 . ____________________________^_________________

  • Fasta :-

    >EHI_052140 ATGGAAGGAGGAGAAGATGATTATGGATTTTCATTAACAACATTCAGTCCCAGCGGAAAA TTAGTTCAAATCGAATATGCACTTAATGCTATTTCTGCTGGTTCAACTAGTGTCGGTATT AAAGCTAAAGATGGAATTGTATTAGCAGTAGAAAAGTCATTACCACCAATGTATATAAGT GAGTCAATACAAAAAATTAATCATTTATGTGATAGTGTTGGAATGGTAAGTAGTGGAATG GGACCTGACGCTCGAGTATTAGTAAAAAAAGGAAGAAAAGAAGGACAAAAGTATTGGTTA GAATATCAAGAAGATATAAATTGTTCAATGATGACAAGAAAGTTAGCATATTTAATGCAA GAATATACTCAAAAAGGAGGTGTTAGACCATTTGGAGTCAGTGTGTTAGTTGCAGGATTT GATGGTAAAACACCACGTTTATATCAAGTTGATCCAAGTGGATCATTTTGGACTTGGAAA GCAACAGCACTTGGAAAGAATATGACATCAGTTAAGACATTCTTAGAAAAGCGATATCAC GATGATATTGAGTTAGAAGATGCTATTCATACTGCTATTTTAGCATTAAAAGAGGGATTT GAAGGAGAAATGAATGAACATAATATTGAAATTGGACTTTGTACAAAAGAAAATGGGTTT AAAGTATTAACTCCATCAGAAATCAGAGATTATTTGGATATTGCCAATTAAATCGTTTAA TTTC
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  • Fasta :-

    MEGGEDDYGFSLTTFSPSGKLVQIEYALNAISAGSTSVGIKAKDGIVLAVEKSLPPMYIS ESIQKINHLCDSVGMVSSGMGPDARVLVKKGRKEGQKYWLEYQEDINCSMMTRKLAYLMQ EYTQKGGVRPFGVSVLVAGFDGKTPRLYQVDPSGSFWTWKATALGKNMTSVKTFLEKRYH DDIELEDAIHTAILALKEGFEGEMNEHNIEIGLCTKENGFKVLTPSEIRDYLDIAN

  • title: active site
  • coordinates: S35,E51,S53,K65,K166
No Results
No Results
No Results

EHI_052140      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India