EHI_053020 | 26S protease regulatory subunit, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_053020OTHER0.9999820.0000080.000010
No Results

  • Fasta :-

    >EHI_053020 MEGFTEEEMITLNEADVLSLSNEEIKQQIKQMERQEGVIRHEHERIRQELAVINKQNKES KEKIEMFAKLPFLISNVVEILDLPPEESDDGSGLDNKGNVGTKGVVINTSMRSNVFLPVS GLVNVKDLKPGDLVGVNKDTYLILEKLPQQYDGRVKSMEVIERPTETYNDVGGLDKEMKE MIEAIVLPMTQKEKFEKLGIQTPKGVLLYGPPGTGKTLMARACAAQTKSTFLKLAAPQLV SSSIGDGSRIIREMFELAKSKAPAIIFIDEIDAIGTKRTESEHSGDREIQRTMLELLNQL DGFSKTDDVRVIAATNRIDVLDPALLRSGRFDRKIEFPTPNEEARVHILQIHSKKLKCSD DINFEELARSTQDFNGAQLKAVCVEAGMIALRREAIEIRHEDFQQGILEVQSKKKKSLTY FA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_053020.fa Sequence name : EHI_053020 Sequence length : 422 VALUES OF COMPUTED PARAMETERS Coef20 : 3.440 CoefTot : 0.000 ChDiff : -10 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.735 1.365 -0.067 0.496 MesoH : -0.519 0.319 -0.340 0.182 MuHd_075 : 23.404 9.485 5.409 2.767 MuHd_095 : 11.982 3.286 3.078 1.070 MuHd_100 : 17.601 8.438 4.311 2.647 MuHd_105 : 18.152 10.225 3.969 2.971 Hmax_075 : 7.000 10.267 -0.429 4.142 Hmax_095 : -2.900 2.700 -2.946 2.070 Hmax_100 : 7.300 9.900 -0.449 3.870 Hmax_105 : -2.700 7.600 -2.225 3.270 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9975 0.0025 DFMC : 0.9893 0.0107
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 422 EHI_053020 MEGFTEEEMITLNEADVLSLSNEEIKQQIKQMERQEGVIRHEHERIRQELAVINKQNKESKEKIEMFAKLPFLISNVVEI 80 LDLPPEESDDGSGLDNKGNVGTKGVVINTSMRSNVFLPVSGLVNVKDLKPGDLVGVNKDTYLILEKLPQQYDGRVKSMEV 160 IERPTETYNDVGGLDKEMKEMIEAIVLPMTQKEKFEKLGIQTPKGVLLYGPPGTGKTLMARACAAQTKSTFLKLAAPQLV 240 SSSIGDGSRIIREMFELAKSKAPAIIFIDEIDAIGTKRTESEHSGDREIQRTMLELLNQLDGFSKTDDVRVIAATNRIDV 320 LDPALLRSGRFDRKIEFPTPNEEARVHILQIHSKKLKCSDDINFEELARSTQDFNGAQLKAVCVEAGMIALRREAIEIRH 400 EDFQQGILEVQSKKKKSLTYFA 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_053020 26 LSNEEIK|QQ 0.071 . EHI_053020 30 EIKQQIK|QM 0.070 . EHI_053020 34 QIKQMER|QE 0.097 . EHI_053020 40 RQEGVIR|HE 0.092 . EHI_053020 45 IRHEHER|IR 0.087 . EHI_053020 47 HEHERIR|QE 0.093 . EHI_053020 55 ELAVINK|QN 0.062 . EHI_053020 58 VINKQNK|ES 0.072 . EHI_053020 61 KQNKESK|EK 0.071 . EHI_053020 63 NKESKEK|IE 0.060 . EHI_053020 69 KIEMFAK|LP 0.059 . EHI_053020 97 GSGLDNK|GN 0.060 . EHI_053020 103 KGNVGTK|GV 0.086 . EHI_053020 112 VINTSMR|SN 0.107 . EHI_053020 126 SGLVNVK|DL 0.070 . EHI_053020 129 VNVKDLK|PG 0.060 . EHI_053020 138 DLVGVNK|DT 0.076 . EHI_053020 146 TYLILEK|LP 0.055 . EHI_053020 154 PQQYDGR|VK 0.083 . EHI_053020 156 QYDGRVK|SM 0.084 . EHI_053020 163 SMEVIER|PT 0.110 . EHI_053020 176 DVGGLDK|EM 0.057 . EHI_053020 179 GLDKEMK|EM 0.065 . EHI_053020 192 VLPMTQK|EK 0.062 . EHI_053020 194 PMTQKEK|FE 0.065 . EHI_053020 197 QKEKFEK|LG 0.067 . EHI_053020 204 LGIQTPK|GV 0.083 . EHI_053020 216 GPPGTGK|TL 0.061 . EHI_053020 221 GKTLMAR|AC 0.103 . EHI_053020 228 ACAAQTK|ST 0.100 . EHI_053020 233 TKSTFLK|LA 0.108 . EHI_053020 249 SIGDGSR|II 0.089 . EHI_053020 252 DGSRIIR|EM 0.215 . EHI_053020 259 EMFELAK|SK 0.076 . EHI_053020 261 FELAKSK|AP 0.064 . EHI_053020 277 IDAIGTK|RT 0.062 . EHI_053020 278 DAIGTKR|TE 0.131 . EHI_053020 287 SEHSGDR|EI 0.080 . EHI_053020 291 GDREIQR|TM 0.097 . EHI_053020 305 QLDGFSK|TD 0.058 . EHI_053020 310 SKTDDVR|VI 0.078 . EHI_053020 317 VIAATNR|ID 0.068 . EHI_053020 327 LDPALLR|SG 0.083 . EHI_053020 330 ALLRSGR|FD 0.330 . EHI_053020 333 RSGRFDR|KI 0.340 . EHI_053020 334 SGRFDRK|IE 0.080 . EHI_053020 345 TPNEEAR|VH 0.129 . EHI_053020 354 ILQIHSK|KL 0.066 . EHI_053020 355 LQIHSKK|LK 0.090 . EHI_053020 357 IHSKKLK|CS 0.098 . EHI_053020 369 NFEELAR|ST 0.110 . EHI_053020 380 FNGAQLK|AV 0.091 . EHI_053020 392 AGMIALR|RE 0.083 . EHI_053020 393 GMIALRR|EA 0.195 . EHI_053020 399 REAIEIR|HE 0.104 . EHI_053020 413 ILEVQSK|KK 0.058 . EHI_053020 414 LEVQSKK|KK 0.085 . EHI_053020 415 EVQSKKK|KS 0.098 . EHI_053020 416 VQSKKKK|SL 0.201 . ____________________________^_________________

  • Fasta :-

    >EHI_053020 ATGGAAGGTTTCACGGAAGAAGAAATGATTACATTAAATGAAGCAGATGTTCTTTCACTT AGTAATGAAGAAATTAAACAACAAATTAAACAAATGGAAAGGCAAGAAGGAGTTATTAGA CATGAACATGAAAGAATTCGACAAGAGCTTGCAGTTATTAATAAACAAAATAAAGAAAGT AAAGAAAAGATAGAGATGTTTGCAAAATTACCATTTTTAATATCAAATGTAGTTGAGATA TTAGACTTGCCACCAGAAGAAAGTGATGATGGGTCAGGATTAGATAATAAAGGAAATGTA GGAACAAAAGGAGTTGTTATTAATACTTCGATGAGATCTAATGTATTTCTTCCAGTGTCA GGACTTGTTAATGTCAAAGACCTTAAACCAGGAGATCTTGTTGGAGTTAATAAAGACACA TATTTAATATTAGAAAAATTACCACAACAATATGATGGAAGAGTTAAGTCGATGGAAGTC ATTGAAAGACCAACAGAAACATATAACGATGTAGGAGGATTAGATAAAGAAATGAAAGAA ATGATTGAGGCTATTGTTTTACCTATGACACAAAAAGAGAAATTTGAAAAGCTTGGGATT CAAACACCAAAAGGAGTTCTTTTATATGGACCACCAGGAACAGGAAAAACATTAATGGCA AGAGCATGTGCAGCACAAACAAAAAGTACGTTTTTAAAATTAGCAGCTCCACAACTTGTT TCATCAAGTATTGGAGATGGGTCAAGAATCATTAGAGAGATGTTTGAGCTTGCTAAATCA AAAGCACCAGCAATTATTTTTATTGATGAAATAGATGCAATTGGTACAAAAAGAACGGAA AGTGAACATAGTGGAGATAGAGAAATTCAAAGAACAATGTTAGAATTATTAAACCAATTA GATGGGTTTAGTAAAACGGATGATGTCAGAGTTATTGCGGCAACAAATCGAATTGATGTT TTAGATCCAGCACTCTTACGTTCAGGAAGATTTGATAGAAAGATAGAGTTTCCAACACCA AATGAAGAGGCAAGAGTTCATATTTTACAAATCCATAGTAAAAAATTAAAGTGTAGTGAT GACATTAATTTTGAAGAACTTGCACGTTCTACACAAGATTTTAATGGAGCACAATTAAAG GCAGTTTGTGTTGAAGCTGGAATGATTGCATTAAGGAGAGAAGCAATAGAAATTCGACAT GAAGATTTCCAACAAGGAATATTAGAAGTTCAAAGCAAGAAAAAGAAGAGTTTAACATAT TTTGCTTAA
  • Download Fasta

  • Fasta :-

    MEGFTEEEMITLNEADVLSLSNEEIKQQIKQMERQEGVIRHEHERIRQELAVINKQNKES KEKIEMFAKLPFLISNVVEILDLPPEESDDGSGLDNKGNVGTKGVVINTSMRSNVFLPVS GLVNVKDLKPGDLVGVNKDTYLILEKLPQQYDGRVKSMEVIERPTETYNDVGGLDKEMKE MIEAIVLPMTQKEKFEKLGIQTPKGVLLYGPPGTGKTLMARACAAQTKSTFLKLAAPQLV SSSIGDGSRIIREMFELAKSKAPAIIFIDEIDAIGTKRTESEHSGDREIQRTMLELLNQL DGFSKTDDVRVIAATNRIDVLDPALLRSGRFDRKIEFPTPNEEARVHILQIHSKKLKCSD DINFEELARSTQDFNGAQLKAVCVEAGMIALRREAIEIRHEDFQQGILEVQSKKKKSLTY FA

  • title: ATP binding site
  • coordinates: P211,P212,G213,T214,G215,K216,T217,L218,D269,N316
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_05302092 SSDDGSGLDN0.992unspEHI_05302092 SSDDGSGLDN0.992unspEHI_05302092 SSDDGSGLDN0.992unspEHI_053020157 SGRVKSMEVI0.992unspEHI_053020202 TLGIQTPKGV0.992unspEHI_053020281 SKRTESEHSG0.997unspEHI_053020284 SESEHSGDRE0.994unspEHI_05302021 SVLSLSNEEI0.994unspEHI_05302060 SQNKESKEKI0.993unsp

EHI_053020      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India