EHI_054530 | serine carboxypeptidase (S28) family protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008236      

  • Computed_GO_Functions:  serine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EHI_054530SP0.2737080.6754590.050833CS pos: 12-13. SLG-FR. Pr: 0.4300
No Results

  • Fasta :-

    >EHI_054530 MFLFLLLTTSLGFRFQNIRFRGEMDRSDVIEHVSTQPIDHFDLTNKKTINIRYFINDTIY SKEAPLLVDLGGEGTQRAAAVGGRFVINKYAEKYNSLMLAIEHRFYGKSVPEGGLSQENL GYLSAAQALEDYIMIINQIKKEYQITGPVIVFGGSYSGNLATWIRQKYPNVVYAAVASSA PVYATSTFYEFLDVIYNDMGEKCGNAWKEATDSIEELFKTDSGKAQLKNDFKTCTEIKEE DDLTILIQQIQATMVNYPQYNGSYSLTIEGVCNILTTEGKTAYENMVDLMSHAFNEFGFE CAPSSYADMLTDMANTKTEEEGNRLASTRSWAWQICSEYSYFQPVNESLPFSKRLNNEFY YLLCKDIFNVDKQRLDRRVYHTNLMYGGYKPKATNVAYTSGSTDPWSPLAKHETLPSDIN CYASYIKGTAHCADLYAEKDTDPEQLKQQRMETAQFIDELISRYNN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_054530.fa Sequence name : EHI_054530 Sequence length : 466 VALUES OF COMPUTED PARAMETERS Coef20 : 4.920 CoefTot : 0.338 ChDiff : -16 ZoneTo : 22 KR : 3 DE : 0 CleavSite : 21 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.300 1.212 0.145 0.551 MesoH : -0.214 0.312 -0.303 0.276 MuHd_075 : 19.143 7.422 3.206 5.143 MuHd_095 : 15.794 11.697 3.199 3.314 MuHd_100 : 15.076 9.627 3.257 2.798 MuHd_105 : 17.015 8.767 3.776 3.565 Hmax_075 : 13.650 15.750 1.061 5.658 Hmax_095 : 11.550 15.050 3.611 3.701 Hmax_100 : 20.700 17.000 3.124 6.590 Hmax_105 : 17.000 12.600 1.607 4.520 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2531 0.7469 DFMC : 0.2492 0.7508 This protein is probably imported in mitochondria. f(Ser) = 0.0455 f(Arg) = 0.1364 CMi = 0.17422 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 466 EHI_054530 MFLFLLLTTSLGFRFQNIRFRGEMDRSDVIEHVSTQPIDHFDLTNKKTINIRYFINDTIYSKEAPLLVDLGGEGTQRAAA 80 VGGRFVINKYAEKYNSLMLAIEHRFYGKSVPEGGLSQENLGYLSAAQALEDYIMIINQIKKEYQITGPVIVFGGSYSGNL 160 ATWIRQKYPNVVYAAVASSAPVYATSTFYEFLDVIYNDMGEKCGNAWKEATDSIEELFKTDSGKAQLKNDFKTCTEIKEE 240 DDLTILIQQIQATMVNYPQYNGSYSLTIEGVCNILTTEGKTAYENMVDLMSHAFNEFGFECAPSSYADMLTDMANTKTEE 320 EGNRLASTRSWAWQICSEYSYFQPVNESLPFSKRLNNEFYYLLCKDIFNVDKQRLDRRVYHTNLMYGGYKPKATNVAYTS 400 GSTDPWSPLAKHETLPSDINCYASYIKGTAHCADLYAEKDTDPEQLKQQRMETAQFIDELISRYNN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .................................................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_054530 14 TTSLGFR|FQ 0.100 . EHI_054530 19 FRFQNIR|FR 0.102 . EHI_054530 21 FQNIRFR|GE 0.094 . EHI_054530 26 FRGEMDR|SD 0.124 . EHI_054530 46 HFDLTNK|KT 0.059 . EHI_054530 47 FDLTNKK|TI 0.074 . EHI_054530 52 KKTINIR|YF 0.080 . EHI_054530 62 NDTIYSK|EA 0.055 . EHI_054530 77 GGEGTQR|AA 0.108 . EHI_054530 84 AAAVGGR|FV 0.143 . EHI_054530 89 GRFVINK|YA 0.107 . EHI_054530 93 INKYAEK|YN 0.070 . EHI_054530 104 MLAIEHR|FY 0.178 . EHI_054530 108 EHRFYGK|SV 0.123 . EHI_054530 140 MIINQIK|KE 0.064 . EHI_054530 141 IINQIKK|EY 0.106 . EHI_054530 165 NLATWIR|QK 0.090 . EHI_054530 167 ATWIRQK|YP 0.065 . EHI_054530 202 YNDMGEK|CG 0.056 . EHI_054530 208 KCGNAWK|EA 0.075 . EHI_054530 219 SIEELFK|TD 0.061 . EHI_054530 224 FKTDSGK|AQ 0.062 . EHI_054530 228 SGKAQLK|ND 0.062 . EHI_054530 232 QLKNDFK|TC 0.060 . EHI_054530 238 KTCTEIK|EE 0.060 . EHI_054530 280 ILTTEGK|TA 0.066 . EHI_054530 317 TDMANTK|TE 0.068 . EHI_054530 324 TEEEGNR|LA 0.091 . EHI_054530 329 NRLASTR|SW 0.208 . EHI_054530 353 ESLPFSK|RL 0.062 . EHI_054530 354 SLPFSKR|LN 0.124 . EHI_054530 365 FYYLLCK|DI 0.070 . EHI_054530 372 DIFNVDK|QR 0.059 . EHI_054530 374 FNVDKQR|LD 0.094 . EHI_054530 377 DKQRLDR|RV 0.282 . EHI_054530 378 KQRLDRR|VY 0.162 . EHI_054530 390 LMYGGYK|PK 0.060 . EHI_054530 392 YGGYKPK|AT 0.077 . EHI_054530 411 PWSPLAK|HE 0.060 . EHI_054530 427 CYASYIK|GT 0.062 . EHI_054530 439 ADLYAEK|DT 0.077 . EHI_054530 447 TDPEQLK|QQ 0.064 . EHI_054530 450 EQLKQQR|ME 0.096 . EHI_054530 463 IDELISR|YN 0.087 . ____________________________^_________________

  • Fasta :-

    >EHI_054530 ATGTTTCTTTTCTTATTACTCACAACATCTCTTGGATTTCGTTTCCAAAACATTCGTTTT AGAGGAGAAATGGATAGAAGCGACGTTATAGAACATGTTTCAACACAACCAATTGACCAT TTTGATTTAACCAATAAAAAGACAATAAACATTCGATATTTTATTAACGACACTATATAT AGTAAAGAAGCACCACTTTTGGTTGACCTTGGAGGAGAAGGAACACAAAGGGCAGCTGCT GTTGGAGGAAGATTTGTTATTAATAAATATGCCGAAAAATATAATTCATTAATGCTTGCA ATTGAACATAGATTTTATGGTAAATCTGTTCCAGAAGGAGGATTGTCACAAGAAAATCTT GGATATCTTAGTGCAGCTCAAGCCTTAGAAGATTATATTATGATTATTAATCAAATTAAA AAAGAATATCAAATCACTGGTCCTGTTATAGTTTTTGGTGGATCATATAGTGGAAACCTT GCTACGTGGATTAGACAAAAATATCCAAATGTAGTTTATGCAGCCGTTGCTTCATCTGCA CCAGTTTATGCCACATCTACTTTTTATGAATTTTTAGATGTTATTTACAATGATATGGGT GAAAAATGTGGTAATGCTTGGAAAGAAGCTACTGATAGTATTGAAGAACTTTTCAAAACT GACTCTGGTAAAGCACAACTTAAGAATGATTTTAAAACATGTACTGAAATTAAAGAAGAA GATGACCTTACTATTCTTATTCAACAAATCCAAGCAACAATGGTAAATTATCCACAATAT AATGGAAGTTATTCATTAACTATTGAAGGTGTTTGTAATATATTAACTACTGAAGGAAAA ACAGCATATGAGAATATGGTTGACTTAATGAGTCATGCATTTAATGAATTTGGATTTGAA TGTGCACCATCAAGTTATGCTGACATGCTTACAGATATGGCAAATACTAAAACAGAAGAA GAAGGAAATAGACTTGCATCAACAAGAAGTTGGGCATGGCAAATCTGTAGTGAATACAGT TATTTCCAACCAGTTAATGAAAGTCTTCCATTTTCAAAGAGACTTAATAATGAATTTTAT TATCTTCTTTGTAAAGACATTTTCAATGTAGATAAACAACGTTTAGATAGAAGAGTTTAT CATACTAATTTAATGTACGGTGGTTATAAACCAAAAGCCACTAATGTAGCTTATACTTCT GGTTCAACTGATCCATGGAGTCCATTGGCTAAACATGAAACTCTTCCTTCAGATATTAAT TGTTATGCTTCTTATATCAAAGGTACTGCCCATTGTGCTGATCTTTATGCTGAGAAAGAT ACTGACCCAGAACAATTAAAACAACAAAGAATGGAAACTGCACAATTCATTGATGAGTTA ATTTCAAGATATAATAATTAA
  • Download Fasta

  • Fasta :-

    MFLFLLLTTSLGFRFQNIRFRGEMDRSDVIEHVSTQPIDHFDLTNKKTINIRYFINDTIY SKEAPLLVDLGGEGTQRAAAVGGRFVINKYAEKYNSLMLAIEHRFYGKSVPEGGLSQENL GYLSAAQALEDYIMIINQIKKEYQITGPVIVFGGSYSGNLATWIRQKYPNVVYAAVASSA PVYATSTFYEFLDVIYNDMGEKCGNAWKEATDSIEELFKTDSGKAQLKNDFKTCTEIKEE DDLTILIQQIQATMVNYPQYNGSYSLTIEGVCNILTTEGKTAYENMVDLMSHAFNEFGFE CAPSSYADMLTDMANTKTEEEGNRLASTRSWAWQICSEYSYFQPVNESLPFSKRLNNEFY YLLCKDIFNVDKQRLDRRVYHTNLMYGGYKPKATNVAYTSGSTDPWSPLAKHETLPSDIN CYASYIKGTAHCADLYAEKDTDPEQLKQQRMETAQFIDELISRYNN

    No Results
No Results
No Results
IDSitePeptideScoreMethod
EHI_054530213 SEATDSIEEL0.996unsp

EHI_054530      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India