EHI_055660 | peptidase, C54 family

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008233      

  • Computed_GO_Functions:  peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EHI_055660OTHER0.9642060.0005680.035226
No Results

  • Fasta :-

    >EHI_055660 MLPPQQKKKKSFTSFVNACSYNLSSHLYNSVVKSQFKPFTFNLKYVLQGVTYTEQPTSNN NIAKHLSTLFRITYRNGFTYHLPHCSLTTDAGWGCTLRSIQMLFLNSLIRLQEPNPGFGD DAAEKVQQNFIIHSMEERREYVQLIEDTPKQEAVLSLYKMFNLKIVRQNNQKGTNYLSPS TCAIALSQLVEMWDQRPCHVIYSNTFPKEIQPNTLLMISAPLNEKTISCLDNTFVGGVVC GVDTKAIYVCGRTGNMLLLLDPHFVQKAHEDGDFDIVDYSVKPSDLRMVRLTELVFGNCI WGILVREDNIEILKNWCKTSLGVTNEEEIREMVSVGNEEGFEVLDF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_055660.fa Sequence name : EHI_055660 Sequence length : 346 VALUES OF COMPUTED PARAMETERS Coef20 : 3.825 CoefTot : -3.814 ChDiff : -4 ZoneTo : 112 KR : 12 DE : 2 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.941 1.441 0.260 0.505 MesoH : -0.305 0.430 -0.262 0.232 MuHd_075 : 36.569 20.269 10.455 8.463 MuHd_095 : 42.932 26.543 11.441 10.263 MuHd_100 : 45.872 26.377 12.022 10.845 MuHd_105 : 39.340 25.305 10.185 9.351 Hmax_075 : 15.200 13.000 0.804 5.350 Hmax_095 : 13.900 16.900 2.335 5.490 Hmax_100 : 16.200 15.600 2.988 5.850 Hmax_105 : 10.400 14.467 1.303 4.865 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5417 0.4583 DFMC : 0.3699 0.6301 This protein is probably imported in mitochondria. f(Ser) = 0.1071 f(Arg) = 0.0357 CMi = 0.89286 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 346 EHI_055660 MLPPQQKKKKSFTSFVNACSYNLSSHLYNSVVKSQFKPFTFNLKYVLQGVTYTEQPTSNNNIAKHLSTLFRITYRNGFTY 80 HLPHCSLTTDAGWGCTLRSIQMLFLNSLIRLQEPNPGFGDDAAEKVQQNFIIHSMEERREYVQLIEDTPKQEAVLSLYKM 160 FNLKIVRQNNQKGTNYLSPSTCAIALSQLVEMWDQRPCHVIYSNTFPKEIQPNTLLMISAPLNEKTISCLDNTFVGGVVC 240 GVDTKAIYVCGRTGNMLLLLDPHFVQKAHEDGDFDIVDYSVKPSDLRMVRLTELVFGNCIWGILVREDNIEILKNWCKTS 320 LGVTNEEEIREMVSVGNEEGFEVLDF 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .......................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_055660 7 MLPPQQK|KK 0.056 . EHI_055660 8 LPPQQKK|KK 0.086 . EHI_055660 9 PPQQKKK|KS 0.150 . EHI_055660 10 PQQKKKK|SF 0.192 . EHI_055660 33 LYNSVVK|SQ 0.078 . EHI_055660 37 VVKSQFK|PF 0.062 . EHI_055660 44 PFTFNLK|YV 0.076 . EHI_055660 64 SNNNIAK|HL 0.107 . EHI_055660 71 HLSTLFR|IT 0.145 . EHI_055660 75 LFRITYR|NG 0.080 . EHI_055660 98 GWGCTLR|SI 0.125 . EHI_055660 110 FLNSLIR|LQ 0.084 . EHI_055660 125 GDDAAEK|VQ 0.056 . EHI_055660 138 IHSMEER|RE 0.089 . EHI_055660 139 HSMEERR|EY 0.149 . EHI_055660 150 LIEDTPK|QE 0.057 . EHI_055660 159 AVLSLYK|MF 0.054 . EHI_055660 164 YKMFNLK|IV 0.074 . EHI_055660 167 FNLKIVR|QN 0.087 . EHI_055660 172 VRQNNQK|GT 0.071 . EHI_055660 196 VEMWDQR|PC 0.086 . EHI_055660 208 YSNTFPK|EI 0.081 . EHI_055660 225 SAPLNEK|TI 0.061 . EHI_055660 245 VCGVDTK|AI 0.071 . EHI_055660 252 AIYVCGR|TG 0.077 . EHI_055660 267 DPHFVQK|AH 0.094 . EHI_055660 282 IVDYSVK|PS 0.057 . EHI_055660 287 VKPSDLR|MV 0.091 . EHI_055660 290 SDLRMVR|LT 0.205 . EHI_055660 306 IWGILVR|ED 0.076 . EHI_055660 314 DNIEILK|NW 0.055 . EHI_055660 318 ILKNWCK|TS 0.063 . EHI_055660 330 TNEEEIR|EM 0.081 . ____________________________^_________________

  • Fasta :-

    >EHI_055660 ATGCTTCCACCTCAACAAAAGAAAAAGAAGTCATTCACTAGTTTTGTTAATGCATGTTCG TATAACCTTTCTTCTCATTTATATAATTCTGTTGTCAAATCTCAATTTAAGCCATTTACA TTTAATTTAAAATACGTATTACAAGGAGTTACTTATACTGAACAACCTACATCAAATAAT AATATTGCTAAACACCTTTCAACTTTGTTTCGAATCACTTATAGAAATGGCTTTACTTAC CATTTACCTCACTGTAGTTTGACAACAGATGCTGGATGGGGATGTACATTAAGGTCTATC CAAATGTTGTTTCTTAATTCATTAATAAGACTACAAGAACCAAATCCAGGTTTTGGAGAC GATGCTGCAGAAAAAGTTCAACAAAATTTTATTATTCATTCAATGGAAGAACGAAGAGAA TATGTCCAATTAATTGAAGACACTCCAAAACAAGAAGCTGTTTTAAGTCTTTATAAAATG TTCAATCTAAAGATAGTAAGACAAAATAACCAAAAAGGAACAAATTACCTTTCTCCTTCT ACATGTGCAATAGCCTTATCTCAACTTGTAGAGATGTGGGACCAACGACCTTGTCATGTT ATTTATAGTAATACTTTCCCTAAAGAAATTCAACCAAACACTCTTCTAATGATTAGTGCA CCTTTAAATGAAAAAACAATTAGTTGTCTTGATAATACTTTTGTAGGAGGTGTAGTGTGT GGTGTTGATACAAAAGCTATTTATGTCTGTGGAAGAACAGGAAACATGTTACTTCTACTT GACCCTCACTTTGTTCAAAAAGCACACGAAGATGGAGATTTTGATATTGTTGATTATTCT GTAAAACCAAGTGACTTAAGAATGGTTCGTCTAACTGAGTTGGTTTTTGGTAATTGTATA TGGGGAATATTGGTCAGAGAAGATAATATAGAGATACTAAAAAATTGGTGTAAAACTTCA CTTGGAGTGACTAATGAAGAAGAGATACGTGAGATGGTTTCTGTAGGTAATGAAGAAGGC TTCGAGGTGTTAGATTTTTAA
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  • Fasta :-

    MLPPQQKKKKSFTSFVNACSYNLSSHLYNSVVKSQFKPFTFNLKYVLQGVTYTEQPTSNN NIAKHLSTLFRITYRNGFTYHLPHCSLTTDAGWGCTLRSIQMLFLNSLIRLQEPNPGFGD DAAEKVQQNFIIHSMEERREYVQLIEDTPKQEAVLSLYKMFNLKIVRQNNQKGTNYLSPS TCAIALSQLVEMWDQRPCHVIYSNTFPKEIQPNTLLMISAPLNEKTISCLDNTFVGGVVC GVDTKAIYVCGRTGNMLLLLDPHFVQKAHEDGDFDIVDYSVKPSDLRMVRLTELVFGNCI WGILVREDNIEILKNWCKTSLGVTNEEEIREMVSVGNEEGFEVLDF

    No Results
No Results
No Results
IDSitePeptideScoreMethod
EHI_055660280 SIVDYSVKPS0.991unsp

EHI_055660      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India