EHI_058500 | peptidase, C54 family

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008233      

  • Computed_GO_Functions:  peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EHI_058500OTHER0.9525410.0016630.045796
No Results

  • Fasta :-

    >EHI_058500 MSMLRCIGYNIGSYFYNSVSSKRLIKLQPFTQKNVVHILGNCYYPETNENLNHLTFNDAN IKIHDLIVATYRQKYSYLGNTYLSSDAGWGCAIRATQMMIVNALVIFKDQMQQIVDYNSF EHQQNKSQAKELIYDRISSLLSIHNIYIQQVIKTHNPKGTNFLPPSVCCIAISSLLQEWD KKPFNCITCLNHIPSCSCPTLYLIPRIITFTEHQLILDSLALSQSRGFVGGIGESAIFVF GCQGTTLFFLDPHYVQNAGDFGYFNPPTYQIDISLISSSVVFAFMCYEENECEQLRTIFG MGKVPIVAREFTSTKEIDGVEVLDF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_058500.fa Sequence name : EHI_058500 Sequence length : 325 VALUES OF COMPUTED PARAMETERS Coef20 : 4.104 CoefTot : -2.147 ChDiff : -4 ZoneTo : 45 KR : 5 DE : 0 CleavSite : 15 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.429 1.735 0.324 0.596 MesoH : 0.369 0.706 -0.059 0.375 MuHd_075 : 34.937 23.108 10.604 8.484 MuHd_095 : 30.519 27.202 10.422 8.822 MuHd_100 : 35.398 23.143 11.530 7.510 MuHd_105 : 32.014 18.115 9.241 6.514 Hmax_075 : 14.700 14.300 1.176 5.530 Hmax_095 : 18.113 18.288 2.712 6.825 Hmax_100 : 11.200 15.900 1.664 4.900 Hmax_105 : 5.800 11.550 1.621 4.783 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3084 0.6916 DFMC : 0.4625 0.5375 This protein is probably imported in mitochondria. f(Ser) = 0.1111 f(Arg) = 0.0444 CMi = 0.84034 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 325 EHI_058500 MSMLRCIGYNIGSYFYNSVSSKRLIKLQPFTQKNVVHILGNCYYPETNENLNHLTFNDANIKIHDLIVATYRQKYSYLGN 80 TYLSSDAGWGCAIRATQMMIVNALVIFKDQMQQIVDYNSFEHQQNKSQAKELIYDRISSLLSIHNIYIQQVIKTHNPKGT 160 NFLPPSVCCIAISSLLQEWDKKPFNCITCLNHIPSCSCPTLYLIPRIITFTEHQLILDSLALSQSRGFVGGIGESAIFVF 240 GCQGTTLFFLDPHYVQNAGDFGYFNPPTYQIDISLISSSVVFAFMCYEENECEQLRTIFGMGKVPIVAREFTSTKEIDGV 320 EVLDF 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ..... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_058500 5 --MSMLR|CI 0.106 . EHI_058500 22 YNSVSSK|RL 0.078 . EHI_058500 23 NSVSSKR|LI 0.187 . EHI_058500 26 SSKRLIK|LQ 0.100 . EHI_058500 33 LQPFTQK|NV 0.080 . EHI_058500 62 FNDANIK|IH 0.058 . EHI_058500 72 LIVATYR|QK 0.091 . EHI_058500 74 VATYRQK|YS 0.061 . EHI_058500 94 GWGCAIR|AT 0.090 . EHI_058500 108 NALVIFK|DQ 0.074 . EHI_058500 126 FEHQQNK|SQ 0.086 . EHI_058500 130 QNKSQAK|EL 0.074 . EHI_058500 136 KELIYDR|IS 0.065 . EHI_058500 153 YIQQVIK|TH 0.065 . EHI_058500 158 IKTHNPK|GT 0.071 . EHI_058500 181 LLQEWDK|KP 0.063 . EHI_058500 182 LQEWDKK|PF 0.086 . EHI_058500 206 TLYLIPR|II 0.127 . EHI_058500 226 LALSQSR|GF 0.092 . EHI_058500 296 NECEQLR|TI 0.100 . EHI_058500 303 TIFGMGK|VP 0.061 . EHI_058500 309 KVPIVAR|EF 0.082 . EHI_058500 315 REFTSTK|EI 0.076 . ____________________________^_________________

  • Fasta :-

    >EHI_058500 ATGTCTATGTTGAGATGTATTGGGTATAATATTGGGTCATATTTTTATAATAGTGTGTCT TCTAAAAGACTAATTAAATTACAACCATTTACACAAAAAAATGTTGTTCATATACTTGGA AATTGTTATTATCCTGAAACTAATGAAAATTTAAATCATTTGACTTTCAACGATGCAAAT ATTAAAATTCATGATTTAATTGTAGCAACATACAGACAAAAATATTCATATTTAGGAAAC ACTTATCTTTCTTCTGATGCAGGATGGGGGTGTGCTATTCGAGCAACACAAATGATGATA GTAAATGCATTAGTCATTTTTAAAGATCAAATGCAACAAATAGTTGATTATAATTCGTTT GAACATCAACAAAATAAATCACAAGCAAAAGAACTTATTTATGATAGAATCTCTTCATTA TTATCAATTCATAATATCTACATTCAACAAGTCATTAAAACACATAATCCAAAAGGAACT AATTTTTTACCACCATCTGTATGTTGTATAGCTATTTCATCACTTTTACAAGAATGGGAT AAAAAGCCATTTAATTGTATCACTTGTTTAAACCATATCCCAAGTTGTTCATGTCCAACA CTTTATTTAATTCCTCGAATTATCACATTCACTGAACATCAACTAATTTTAGACTCATTA GCTCTTTCTCAAAGTCGAGGATTTGTTGGTGGTATTGGAGAATCAGCAATTTTTGTTTTT GGATGTCAAGGAACAACATTATTTTTTTTAGACCCTCATTATGTACAAAATGCAGGAGAC TTTGGGTATTTTAATCCACCAACATACCAAATAGACATTTCTTTGATTAGTTCATCTGTT GTTTTTGCTTTTATGTGTTATGAAGAAAATGAATGTGAACAACTTCGAACCATCTTTGGT ATGGGGAAAGTACCTATTGTTGCAAGAGAATTTACATCAACAAAAGAAATTGATGGTGTT GAAGTCTTAGACTTTTAA
  • Download Fasta

  • Fasta :-

    MSMLRCIGYNIGSYFYNSVSSKRLIKLQPFTQKNVVHILGNCYYPETNENLNHLTFNDAN IKIHDLIVATYRQKYSYLGNTYLSSDAGWGCAIRATQMMIVNALVIFKDQMQQIVDYNSF EHQQNKSQAKELIYDRISSLLSIHNIYIQQVIKTHNPKGTNFLPPSVCCIAISSLLQEWD KKPFNCITCLNHIPSCSCPTLYLIPRIITFTEHQLILDSLALSQSRGFVGGIGESAIFVF GCQGTTLFFLDPHYVQNAGDFGYFNPPTYQIDISLISSSVVFAFMCYEENECEQLRTIFG MGKVPIVAREFTSTKEIDGVEVLDF

    No Results
No Results
No Results
IDSitePeptideScoreMethod
EHI_058500313 SREFTSTKEI0.996unsp

EHI_058500      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India