EHI_064200 | ubiquitin carboxyl-terminal hydrolase 5, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_064200OTHER0.9995730.0003830.000044
No Results

  • Fasta :-

    >EHI_064200 MCHYSSDIFEEFISLSVPVPQWYSNEAHPISLESCIELFLHYENIDDWYCEKCNKKRKAK IYSTISDIPKVLIIQLVRIYSKKYPIQQVLFPLNDLVVQTSPNHFDFYDLYSFITHTGSL SKGHYISWNKVSNQWYCCNDENVSQGNPTTSSDTVYILFYKRKVNSAGYNK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_064200.fa Sequence name : EHI_064200 Sequence length : 171 VALUES OF COMPUTED PARAMETERS Coef20 : 3.621 CoefTot : -0.172 ChDiff : -1 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.347 1.318 -0.043 0.478 MesoH : -0.620 0.102 -0.450 0.189 MuHd_075 : 13.307 9.601 2.916 4.010 MuHd_095 : 35.543 22.874 10.096 5.877 MuHd_100 : 34.315 21.091 10.172 5.150 MuHd_105 : 30.480 17.066 9.118 4.271 Hmax_075 : 11.200 11.800 1.648 5.080 Hmax_095 : 18.200 16.712 3.719 5.758 Hmax_100 : 17.900 14.200 3.568 5.180 Hmax_105 : 19.300 17.500 4.271 5.650 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8801 0.1199 DFMC : 0.9627 0.0373
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 171 EHI_064200 MCHYSSDIFEEFISLSVPVPQWYSNEAHPISLESCIELFLHYENIDDWYCEKCNKKRKAKIYSTISDIPKVLIIQLVRIY 80 SKKYPIQQVLFPLNDLVVQTSPNHFDFYDLYSFITHTGSLSKGHYISWNKVSNQWYCCNDENVSQGNPTTSSDTVYILFY 160 KRKVNSAGYNK 240 ................................................................................ 80 ................................................................................ 160 ........... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_064200 52 DDWYCEK|CN 0.056 . EHI_064200 55 YCEKCNK|KR 0.058 . EHI_064200 56 CEKCNKK|RK 0.093 . EHI_064200 57 EKCNKKR|KA 0.218 . EHI_064200 58 KCNKKRK|AK 0.114 . EHI_064200 60 NKKRKAK|IY 0.261 . EHI_064200 70 TISDIPK|VL 0.079 . EHI_064200 78 LIIQLVR|IY 0.095 . EHI_064200 82 LVRIYSK|KY 0.061 . EHI_064200 83 VRIYSKK|YP 0.143 . EHI_064200 122 HTGSLSK|GH 0.060 . EHI_064200 130 HYISWNK|VS 0.055 . EHI_064200 161 VYILFYK|RK 0.053 . EHI_064200 162 YILFYKR|KV 0.165 . EHI_064200 163 ILFYKRK|VN 0.108 . EHI_064200 171 NSAGYNK|-- 0.063 . ____________________________^_________________

  • Fasta :-

    >EHI_064200 ATGTGTCATTATAGCTCAGATATTTTTGAGGAATTTATTTCTTTATCAGTTCCAGTACCT CAATGGTATTCAAATGAAGCACATCCAATCTCATTAGAGAGTTGTATTGAATTATTTCTT CACTATGAAAATATAGATGATTGGTATTGTGAAAAATGCAACAAAAAAAGAAAGGCTAAA ATATATTCAACTATCAGTGATATTCCTAAAGTTTTAATCATTCAATTGGTTAGAATATAC TCAAAGAAATACCCAATTCAACAAGTTTTGTTTCCTTTAAATGATTTAGTAGTTCAAACA TCCCCTAACCATTTCGACTTTTATGATTTATATTCTTTTATCACTCATACAGGATCATTA TCAAAAGGTCATTACATATCATGGAATAAAGTATCAAACCAATGGTACTGTTGCAACGAT GAAAATGTCTCTCAAGGTAACCCTACCACATCATCTGATACTGTGTACATTCTTTTTTAT AAAAGGAAGGTAAATTCAGCTGGTTATAATAAATAA
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  • Fasta :-

    MCHYSSDIFEEFISLSVPVPQWYSNEAHPISLESCIELFLHYENIDDWYCEKCNKKRKAK IYSTISDIPKVLIIQLVRIYSKKYPIQQVLFPLNDLVVQTSPNHFDFYDLYSFITHTGSL SKGHYISWNKVSNQWYCCNDENVSQGNPTTSSDTVYILFYKRKVNSAGYNK

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EHI_064200      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India