EHI_068090 | serine carboxypeptidase (S28) family protein

_IDPredictionOTHERSPmTPCS_Position
EHI_068090SP0.0609820.9221400.016878CS pos: 18-19. SLN-QQ. Pr: 0.3880
No Results

  • Fasta :-

    >EHI_068090 MLLLALCVICSYAKLSLNQQVMQQISQSFMTLELNEVESMTYTVPLDHFNANNQNDFDIQ YFVNKKFLDANDPNAPLFVLLGGEGPASPKVLQNNYVIDSLAKKHKGLMLSVEHRFYGAS TPSLEMDKLIYCTAEQALMDYVEVISHVQEENNLVGHPVIVLGGSYSGNLAAWMRQKYPN VVEGAWASSAPVEAVVDFYQYLEVVQNALPKNTADLLSFAFEQWDKMTTTEEGRKELGKI FNTCTEFGEKDIQTFAESIGTALSGYVQYNSSNWKPSYESTDSICAEINEDIVNKYPLFI KEKYNPEWADKECTPSSQEESYKTLQNTSTYAEGNEDASGRSWFFQTCIAYGYYQAVSEQ SSVKWGKLNQLQGSIDMCKDIYGIDKDTLYNAVDHINVRYGGKKPCVTNVAFTNGNTDPW HALGVTESDHQEGNLVQLIDRTSHCSDLYSEKENDVPELKKARHNELKFFAQVLANVPQN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_068090.fa Sequence name : EHI_068090 Sequence length : 480 VALUES OF COMPUTED PARAMETERS Coef20 : 4.513 CoefTot : 0.405 ChDiff : -26 ZoneTo : 32 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.459 2.071 0.358 0.586 MesoH : -0.470 0.228 -0.407 0.249 MuHd_075 : 29.588 22.111 9.533 6.297 MuHd_095 : 20.787 24.384 7.564 6.859 MuHd_100 : 19.480 23.613 6.913 6.725 MuHd_105 : 18.279 19.830 5.856 5.720 Hmax_075 : 14.600 12.900 2.130 4.410 Hmax_095 : 13.600 17.500 1.513 5.760 Hmax_100 : 13.600 17.500 1.513 5.760 Hmax_105 : 11.400 14.613 1.220 4.883 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7705 0.2295 DFMC : 0.8083 0.1917
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 480 EHI_068090 MLLLALCVICSYAKLSLNQQVMQQISQSFMTLELNEVESMTYTVPLDHFNANNQNDFDIQYFVNKKFLDANDPNAPLFVL 80 LGGEGPASPKVLQNNYVIDSLAKKHKGLMLSVEHRFYGASTPSLEMDKLIYCTAEQALMDYVEVISHVQEENNLVGHPVI 160 VLGGSYSGNLAAWMRQKYPNVVEGAWASSAPVEAVVDFYQYLEVVQNALPKNTADLLSFAFEQWDKMTTTEEGRKELGKI 240 FNTCTEFGEKDIQTFAESIGTALSGYVQYNSSNWKPSYESTDSICAEINEDIVNKYPLFIKEKYNPEWADKECTPSSQEE 320 SYKTLQNTSTYAEGNEDASGRSWFFQTCIAYGYYQAVSEQSSVKWGKLNQLQGSIDMCKDIYGIDKDTLYNAVDHINVRY 400 GGKKPCVTNVAFTNGNTDPWHALGVTESDHQEGNLVQLIDRTSHCSDLYSEKENDVPELKKARHNELKFFAQVLANVPQN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_068090 14 VICSYAK|LS 0.058 . EHI_068090 65 IQYFVNK|KF 0.065 . EHI_068090 66 QYFVNKK|FL 0.122 . EHI_068090 90 EGPASPK|VL 0.057 . EHI_068090 103 VIDSLAK|KH 0.056 . EHI_068090 104 IDSLAKK|HK 0.136 . EHI_068090 106 SLAKKHK|GL 0.091 . EHI_068090 115 MLSVEHR|FY 0.231 . EHI_068090 128 PSLEMDK|LI 0.057 . EHI_068090 175 NLAAWMR|QK 0.098 . EHI_068090 177 AAWMRQK|YP 0.079 . EHI_068090 211 VQNALPK|NT 0.072 . EHI_068090 226 AFEQWDK|MT 0.067 . EHI_068090 234 TTTEEGR|KE 0.071 . EHI_068090 235 TTEEGRK|EL 0.105 . EHI_068090 239 GRKELGK|IF 0.075 . EHI_068090 250 CTEFGEK|DI 0.064 . EHI_068090 275 YNSSNWK|PS 0.076 . EHI_068090 295 NEDIVNK|YP 0.058 . EHI_068090 301 KYPLFIK|EK 0.058 . EHI_068090 303 PLFIKEK|YN 0.064 . EHI_068090 311 NPEWADK|EC 0.062 . EHI_068090 323 SQEESYK|TL 0.063 . EHI_068090 341 NEDASGR|SW 0.150 . EHI_068090 364 SEQSSVK|WG 0.061 . EHI_068090 367 SSVKWGK|LN 0.069 . EHI_068090 379 GSIDMCK|DI 0.087 . EHI_068090 386 DIYGIDK|DT 0.064 . EHI_068090 399 VDHINVR|YG 0.110 . EHI_068090 403 NVRYGGK|KP 0.059 . EHI_068090 404 VRYGGKK|PC 0.091 . EHI_068090 441 LVQLIDR|TS 0.075 . EHI_068090 452 SDLYSEK|EN 0.063 . EHI_068090 460 NDVPELK|KA 0.065 . EHI_068090 461 DVPELKK|AR 0.091 . EHI_068090 463 PELKKAR|HN 0.108 . EHI_068090 468 ARHNELK|FF 0.100 . ____________________________^_________________

  • Fasta :-

    >EHI_068090 ATGTTACTTCTTGCTTTATGTGTTATTTGCAGTTACGCAAAACTCTCACTCAACCAACAA GTAATGCAACAAATATCTCAATCATTCATGACATTAGAATTAAATGAAGTTGAGTCAATG ACATATACTGTTCCATTGGACCATTTCAACGCTAATAACCAGAATGACTTTGATATTCAA TACTTTGTTAATAAAAAATTCCTTGATGCTAATGACCCAAATGCACCACTTTTTGTTTTA TTAGGAGGTGAAGGACCTGCCTCTCCTAAAGTATTACAAAATAATTACGTCATTGATTCA TTGGCTAAAAAGCATAAAGGATTAATGTTATCTGTTGAACATCGTTTTTATGGTGCTTCA ACTCCATCACTTGAAATGGATAAATTAATTTATTGTACTGCAGAACAAGCATTAATGGAT TACGTTGAAGTTATTTCTCATGTTCAAGAAGAAAATAATTTAGTTGGACATCCAGTTATT GTTCTTGGTGGATCATATAGTGGTAATTTAGCTGCTTGGATGAGACAAAAATATCCTAAT GTTGTAGAAGGAGCATGGGCATCATCTGCTCCAGTAGAAGCTGTAGTTGATTTTTATCAA TATCTTGAAGTTGTACAAAATGCACTTCCTAAAAACACTGCAGATTTATTATCATTTGCA TTTGAACAATGGGATAAAATGACTACTACTGAAGAAGGAAGAAAAGAATTAGGAAAGATT TTCAATACTTGTACTGAATTTGGTGAAAAAGATATTCAAACATTTGCAGAGTCTATTGGA ACAGCTCTTTCTGGTTATGTTCAATATAATTCTTCAAATTGGAAACCTTCATATGAAAGT ACTGATTCAATTTGTGCTGAAATTAATGAGGATATTGTTAATAAATACCCATTATTTATT AAAGAAAAATATAATCCAGAATGGGCTGATAAAGAATGTACTCCATCTTCTCAAGAAGAA AGTTATAAAACATTACAAAATACTTCTACTTATGCTGAAGGAAATGAAGATGCTTCTGGT AGATCATGGTTTTTCCAAACATGTATTGCTTATGGATATTATCAAGCTGTTAGTGAACAA TCATCAGTTAAATGGGGTAAATTAAATCAACTTCAAGGAAGTATTGATATGTGTAAAGAT ATTTATGGCATTGATAAAGATACATTATATAATGCAGTTGATCATATCAATGTTAGATAT GGAGGAAAGAAACCATGTGTAACCAATGTTGCATTTACAAATGGTAACACTGATCCTTGG CATGCTCTTGGAGTTACTGAGTCTGATCATCAAGAAGGTAATTTAGTCCAGTTAATTGAC AGAACATCTCATTGTTCTGATCTTTATTCAGAAAAAGAGAATGATGTTCCAGAATTAAAG AAAGCAAGACACAATGAACTTAAATTCTTTGCTCAAGTCCTTGCTAATGTCCCTCAAAAT TAA
  • Download Fasta

  • Fasta :-

    MLLLALCVICSYAKLSLNQQVMQQISQSFMTLELNEVESMTYTVPLDHFNANNQNDFDIQ YFVNKKFLDANDPNAPLFVLLGGEGPASPKVLQNNYVIDSLAKKHKGLMLSVEHRFYGAS TPSLEMDKLIYCTAEQALMDYVEVISHVQEENNLVGHPVIVLGGSYSGNLAAWMRQKYPN VVEGAWASSAPVEAVVDFYQYLEVVQNALPKNTADLLSFAFEQWDKMTTTEEGRKELGKI FNTCTEFGEKDIQTFAESIGTALSGYVQYNSSNWKPSYESTDSICAEINEDIVNKYPLFI KEKYNPEWADKECTPSSQEESYKTLQNTSTYAEGNEDASGRSWFFQTCIAYGYYQAVSEQ SSVKWGKLNQLQGSIDMCKDIYGIDKDTLYNAVDHINVRYGGKKPCVTNVAFTNGNTDPW HALGVTESDHQEGNLVQLIDRTSHCSDLYSEKENDVPELKKARHNELKFFAQVLANVPQN

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_068090317 SCTPSSQEES0.996unspEHI_068090317 SCTPSSQEES0.996unspEHI_068090317 SCTPSSQEES0.996unspEHI_068090362 SSEQSSVKWG0.995unspEHI_068090450 SSDLYSEKEN0.995unspEHI_06809088 SEGPASPKVL0.99unspEHI_068090277 SNWKPSYEST0.996unsp

EHI_068090      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India