EHI_080890 | 26S protease regulatory subunit, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_080890OTHER0.9999200.0000090.000071
No Results

  • Fasta :-

    >EHI_080890 MEEDFEKKPKALDEEEIAILKAYNRGPYANSIKQLEKEVADLATEIHNLVGIQESDTGLA PVSQWDLNADKKLMEEQPLLVSRCIKAMPDEREPRYVISIKEYAKFVVGKSNRVEKDAVQ DGTRVGVDRARYEIKMALPPKIDPSVSVMQVEEKPDVTYKDIGGCKEQIERIREVVELPM LHPEAFENLGIDPPKGVLLYGPPGTGKTLLARAVANRTESTFVRVIGSELVQKYVGEGAK MVRDLFDMAKSKKSCIIFFDEIDAIGGTRFQDDTGESEVQRTMLELINQLDGFDKRGNIK VLMATNRPDTLDPALVRPGRLDRKIEFGLPDIEGRTEIFKIHTKPMSVAKDIRYDLLARL CPNATGAEIQSVCTEAGMFAIRARRKVVTERDFLDAVEKVIKGYQKFSATPKYLAYN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_080890.fa Sequence name : EHI_080890 Sequence length : 417 VALUES OF COMPUTED PARAMETERS Coef20 : 2.761 CoefTot : 0.000 ChDiff : -5 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.424 0.788 -0.049 0.393 MesoH : -1.040 0.140 -0.477 0.141 MuHd_075 : 7.999 4.306 1.003 0.902 MuHd_095 : 23.319 11.717 6.020 4.268 MuHd_100 : 22.627 10.193 5.281 3.585 MuHd_105 : 25.290 12.712 5.676 3.991 Hmax_075 : -19.250 -2.100 -7.284 0.035 Hmax_095 : -11.200 0.788 -4.796 1.820 Hmax_100 : -14.700 -0.600 -6.288 0.680 Hmax_105 : -15.500 -0.900 -6.100 0.233 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9751 0.0249 DFMC : 0.9740 0.0260
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 417 EHI_080890 MEEDFEKKPKALDEEEIAILKAYNRGPYANSIKQLEKEVADLATEIHNLVGIQESDTGLAPVSQWDLNADKKLMEEQPLL 80 VSRCIKAMPDEREPRYVISIKEYAKFVVGKSNRVEKDAVQDGTRVGVDRARYEIKMALPPKIDPSVSVMQVEEKPDVTYK 160 DIGGCKEQIERIREVVELPMLHPEAFENLGIDPPKGVLLYGPPGTGKTLLARAVANRTESTFVRVIGSELVQKYVGEGAK 240 MVRDLFDMAKSKKSCIIFFDEIDAIGGTRFQDDTGESEVQRTMLELINQLDGFDKRGNIKVLMATNRPDTLDPALVRPGR 320 LDRKIEFGLPDIEGRTEIFKIHTKPMSVAKDIRYDLLARLCPNATGAEIQSVCTEAGMFAIRARRKVVTERDFLDAVEKV 400 IKGYQKFSATPKYLAYN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................P............... 400 ................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ EHI_080890 7 MEEDFEK|KP 0.058 . EHI_080890 8 EEDFEKK|PK 0.078 . EHI_080890 10 DFEKKPK|AL 0.086 . EHI_080890 21 EEIAILK|AY 0.057 . EHI_080890 25 ILKAYNR|GP 0.076 . EHI_080890 33 PYANSIK|QL 0.077 . EHI_080890 37 SIKQLEK|EV 0.073 . EHI_080890 71 WDLNADK|KL 0.062 . EHI_080890 72 DLNADKK|LM 0.098 . EHI_080890 83 QPLLVSR|CI 0.103 . EHI_080890 86 LVSRCIK|AM 0.143 . EHI_080890 92 KAMPDER|EP 0.078 . EHI_080890 95 PDEREPR|YV 0.371 . EHI_080890 101 RYVISIK|EY 0.065 . EHI_080890 105 SIKEYAK|FV 0.081 . EHI_080890 110 AKFVVGK|SN 0.106 . EHI_080890 113 VVGKSNR|VE 0.084 . EHI_080890 116 KSNRVEK|DA 0.354 . EHI_080890 124 AVQDGTR|VG 0.063 . EHI_080890 129 TRVGVDR|AR 0.119 . EHI_080890 131 VGVDRAR|YE 0.083 . EHI_080890 135 RARYEIK|MA 0.071 . EHI_080890 141 KMALPPK|ID 0.065 . EHI_080890 154 VMQVEEK|PD 0.061 . EHI_080890 160 KPDVTYK|DI 0.112 . EHI_080890 166 KDIGGCK|EQ 0.058 . EHI_080890 171 CKEQIER|IR 0.082 . EHI_080890 173 EQIERIR|EV 0.100 . EHI_080890 195 LGIDPPK|GV 0.082 . EHI_080890 207 GPPGTGK|TL 0.058 . EHI_080890 212 GKTLLAR|AV 0.111 . EHI_080890 217 ARAVANR|TE 0.105 . EHI_080890 224 TESTFVR|VI 0.168 . EHI_080890 233 GSELVQK|YV 0.130 . EHI_080890 240 YVGEGAK|MV 0.091 . EHI_080890 243 EGAKMVR|DL 0.128 . EHI_080890 250 DLFDMAK|SK 0.076 . EHI_080890 252 FDMAKSK|KS 0.073 . EHI_080890 253 DMAKSKK|SC 0.177 . EHI_080890 269 DAIGGTR|FQ 0.100 . EHI_080890 281 GESEVQR|TM 0.100 . EHI_080890 295 QLDGFDK|RG 0.060 . EHI_080890 296 LDGFDKR|GN 0.265 . EHI_080890 300 DKRGNIK|VL 0.061 . EHI_080890 307 VLMATNR|PD 0.077 . EHI_080890 317 LDPALVR|PG 0.069 . EHI_080890 320 ALVRPGR|LD 0.292 . EHI_080890 323 RPGRLDR|KI 0.457 . EHI_080890 324 PGRLDRK|IE 0.072 . EHI_080890 335 LPDIEGR|TE 0.092 . EHI_080890 340 GRTEIFK|IH 0.060 . EHI_080890 344 IFKIHTK|PM 0.068 . EHI_080890 350 KPMSVAK|DI 0.102 . EHI_080890 353 SVAKDIR|YD 0.089 . EHI_080890 359 RYDLLAR|LC 0.071 . EHI_080890 382 AGMFAIR|AR 0.090 . EHI_080890 384 MFAIRAR|RK 0.103 . EHI_080890 385 FAIRARR|KV 0.567 *ProP* EHI_080890 386 AIRARRK|VV 0.093 . EHI_080890 391 RKVVTER|DF 0.117 . EHI_080890 399 FLDAVEK|VI 0.062 . EHI_080890 402 AVEKVIK|GY 0.064 . EHI_080890 406 VIKGYQK|FS 0.059 . EHI_080890 412 KFSATPK|YL 0.078 . ____________________________^_________________

  • Fasta :-

    >EHI_080890 ATGGAAGAAGATTTTGAGAAGAAACCAAAAGCACTTGATGAAGAAGAAATTGCTATTTTA AAAGCATATAATCGTGGTCCATATGCAAATTCAATTAAACAATTAGAAAAAGAAGTTGCA GACCTTGCAACAGAAATACATAATTTAGTTGGAATACAAGAAAGTGATACAGGACTAGCA CCAGTGTCTCAATGGGATTTAAATGCTGATAAAAAATTGATGGAAGAACAACCATTACTT GTTTCTAGATGTATTAAAGCTATGCCAGATGAACGTGAACCACGATATGTTATTTCTATA AAAGAATATGCAAAATTTGTTGTTGGTAAATCAAATAGAGTTGAAAAAGATGCCGTTCAA GATGGAACAAGAGTCGGAGTAGATAGAGCACGTTATGAAATTAAAATGGCACTTCCACCA AAAATTGACCCATCAGTTTCTGTTATGCAAGTTGAAGAAAAACCAGATGTAACATACAAA GATATTGGAGGGTGTAAAGAACAAATTGAAAGAATTAGAGAAGTTGTTGAACTTCCTATG TTACATCCAGAGGCATTTGAGAATTTAGGAATTGATCCACCTAAAGGAGTATTATTATAT GGACCACCAGGAACAGGTAAAACATTATTAGCACGTGCTGTAGCTAATAGAACAGAATCA ACCTTTGTTCGAGTAATTGGATCAGAGTTAGTTCAAAAATATGTTGGAGAAGGTGCTAAA ATGGTAAGAGACTTATTTGACATGGCTAAAAGTAAAAAGAGTTGTATTATTTTCTTTGAT GAAATTGATGCTATTGGAGGAACTAGATTCCAAGATGATACAGGTGAAAGTGAAGTACAA CGTACTATGTTAGAACTTATTAATCAATTAGATGGATTTGATAAACGTGGAAATATTAAA GTCCTTATGGCAACAAATAGACCAGACACACTTGATCCAGCATTGGTTAGACCAGGAAGA CTTGATAGAAAGATTGAATTTGGTCTTCCAGATATTGAAGGAAGAACAGAAATATTTAAA ATTCATACAAAGCCAATGAGTGTTGCAAAAGACATTCGTTATGACCTTTTAGCCAGACTT TGCCCAAATGCCACTGGAGCAGAAATTCAATCAGTTTGTACTGAAGCAGGAATGTTTGCA ATTAGAGCAAGAAGAAAAGTTGTTACTGAACGAGATTTCTTAGATGCAGTAGAAAAAGTT ATTAAAGGTTATCAAAAATTCTCTGCAACTCCAAAATATCTTGCTTACAATTAA
  • Download Fasta

  • Fasta :-

    MEEDFEKKPKALDEEEIAILKAYNRGPYANSIKQLEKEVADLATEIHNLVGIQESDTGLA PVSQWDLNADKKLMEEQPLLVSRCIKAMPDEREPRYVISIKEYAKFVVGKSNRVEKDAVQ DGTRVGVDRARYEIKMALPPKIDPSVSVMQVEEKPDVTYKDIGGCKEQIERIREVVELPM LHPEAFENLGIDPPKGVLLYGPPGTGKTLLARAVANRTESTFVRVIGSELVQKYVGEGAK MVRDLFDMAKSKKSCIIFFDEIDAIGGTRFQDDTGESEVQRTMLELINQLDGFDKRGNIK VLMATNRPDTLDPALVRPGRLDRKIEFGLPDIEGRTEIFKIHTKPMSVAKDIRYDLLARL CPNATGAEIQSVCTEAGMFAIRARRKVVTERDFLDAVEKVIKGYQKFSATPKYLAYN

    No Results
  • title: ATP binding site
  • coordinates: P202,P203,G204,T205,G206,K207,T208,L209,D260,N306
No Results
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EHI_080890      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India