EHI_082250 | hypothetical protein

_IDPredictionOTHERSPmTPCS_Position
EHI_082250OTHER0.9986570.0011500.000194
No Results

  • Fasta :-

    >EHI_082250 MNIDIDIKFLKTVLRRLIECDTQSFNKDDFEIIKLLKEICEGIGMIVETIPTKNNPNKIN FIAYWTKQPHKIIFSSHFDTVPVGDLKEWKYPPLKATEEIELKTGNVYVYGRGSADMKSG LASQLCILKYLQDMQMKIRDSILLIVSSEEEDGTLGAKDLVKQCPELFTSVELIIVDEPT NLDIGISEKGELRLKVECHGISAHASSPSLGLNAIEGIYSLIQWIKKDLPLSPDDTNQTT FNIGTIKGGNAPNVVADYCVTEIDIRTSSYISVEDIMNNIKTIIASIESTTRFKFVLYEE SKELPVTTDINNKYVKLLTKCIYKEMPKSSIKRMAYATDAAAFAHTQNKPQVIIFGPGNE AVIHKPNEYVIFQFVEIATKALVSFLSEINEE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_082250.fa Sequence name : EHI_082250 Sequence length : 392 VALUES OF COMPUTED PARAMETERS Coef20 : 4.390 CoefTot : -0.134 ChDiff : -11 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.859 1.694 -0.017 0.578 MesoH : -0.680 0.250 -0.401 0.204 MuHd_075 : 30.573 20.864 8.429 7.974 MuHd_095 : 34.199 23.385 8.740 9.060 MuHd_100 : 29.250 22.971 8.684 8.385 MuHd_105 : 24.641 21.198 7.980 7.252 Hmax_075 : 7.350 19.017 1.645 6.183 Hmax_095 : 3.850 15.662 0.430 5.093 Hmax_100 : 8.900 21.400 2.479 6.600 Hmax_105 : 20.067 28.700 5.287 8.400 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6248 0.3752 DFMC : 0.9188 0.0812
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 392 EHI_082250 MNIDIDIKFLKTVLRRLIECDTQSFNKDDFEIIKLLKEICEGIGMIVETIPTKNNPNKINFIAYWTKQPHKIIFSSHFDT 80 VPVGDLKEWKYPPLKATEEIELKTGNVYVYGRGSADMKSGLASQLCILKYLQDMQMKIRDSILLIVSSEEEDGTLGAKDL 160 VKQCPELFTSVELIIVDEPTNLDIGISEKGELRLKVECHGISAHASSPSLGLNAIEGIYSLIQWIKKDLPLSPDDTNQTT 240 FNIGTIKGGNAPNVVADYCVTEIDIRTSSYISVEDIMNNIKTIIASIESTTRFKFVLYEESKELPVTTDINNKYVKLLTK 320 CIYKEMPKSSIKRMAYATDAAAFAHTQNKPQVIIFGPGNEAVIHKPNEYVIFQFVEIATKALVSFLSEINEE 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ........................................................................ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_082250 8 NIDIDIK|FL 0.066 . EHI_082250 11 IDIKFLK|TV 0.070 . EHI_082250 15 FLKTVLR|RL 0.090 . EHI_082250 16 LKTVLRR|LI 0.136 . EHI_082250 27 DTQSFNK|DD 0.074 . EHI_082250 34 DDFEIIK|LL 0.059 . EHI_082250 37 EIIKLLK|EI 0.071 . EHI_082250 53 VETIPTK|NN 0.058 . EHI_082250 58 TKNNPNK|IN 0.097 . EHI_082250 67 FIAYWTK|QP 0.074 . EHI_082250 71 WTKQPHK|II 0.068 . EHI_082250 87 VPVGDLK|EW 0.053 . EHI_082250 90 GDLKEWK|YP 0.059 . EHI_082250 95 WKYPPLK|AT 0.075 . EHI_082250 103 TEEIELK|TG 0.057 . EHI_082250 112 NVYVYGR|GS 0.094 . EHI_082250 118 RGSADMK|SG 0.088 . EHI_082250 129 SQLCILK|YL 0.064 . EHI_082250 137 LQDMQMK|IR 0.066 . EHI_082250 139 DMQMKIR|DS 0.103 . EHI_082250 158 DGTLGAK|DL 0.065 . EHI_082250 162 GAKDLVK|QC 0.064 . EHI_082250 189 DIGISEK|GE 0.057 . EHI_082250 193 SEKGELR|LK 0.068 . EHI_082250 195 KGELRLK|VE 0.057 . EHI_082250 226 SLIQWIK|KD 0.058 . EHI_082250 227 LIQWIKK|DL 0.110 . EHI_082250 247 FNIGTIK|GG 0.061 . EHI_082250 266 VTEIDIR|TS 0.069 . EHI_082250 281 DIMNNIK|TI 0.066 . EHI_082250 292 SIESTTR|FK 0.082 . EHI_082250 294 ESTTRFK|FV 0.076 . EHI_082250 302 VLYEESK|EL 0.057 . EHI_082250 313 TTDINNK|YV 0.070 . EHI_082250 316 INNKYVK|LL 0.069 . EHI_082250 320 YVKLLTK|CI 0.067 . EHI_082250 324 LTKCIYK|EM 0.055 . EHI_082250 328 IYKEMPK|SS 0.072 . EHI_082250 332 MPKSSIK|RM 0.061 . EHI_082250 333 PKSSIKR|MA 0.318 . EHI_082250 349 FAHTQNK|PQ 0.065 . EHI_082250 365 NEAVIHK|PN 0.086 . EHI_082250 380 FVEIATK|AL 0.057 . ____________________________^_________________

  • Fasta :-

    >EHI_082250 ATGAATATTGATATTGATATTAAATTTCTTAAAACAGTATTAAGAAGACTAATTGAATGT GACACACAAAGTTTCAACAAAGATGATTTTGAAATAATTAAATTATTAAAAGAAATTTGT GAAGGGATTGGGATGATTGTTGAAACTATACCCACAAAGAATAATCCAAATAAAATAAAT TTTATAGCTTATTGGACGAAGCAACCACATAAAATCATTTTTAGCTCACACTTTGATACA GTTCCTGTTGGAGATTTGAAAGAGTGGAAATATCCACCCCTTAAAGCAACAGAAGAAATA GAATTAAAAACAGGGAATGTTTATGTTTATGGAAGAGGATCAGCTGATATGAAAAGTGGA TTAGCTAGTCAATTATGTATCTTAAAATATCTTCAAGATATGCAAATGAAGATTAGAGAT TCAATTCTATTAATTGTTTCAAGTGAAGAAGAGGATGGTACTTTAGGTGCTAAAGATCTT GTTAAACAATGTCCAGAATTGTTTACATCAGTTGAATTAATTATTGTTGATGAACCAACA AACTTAGATATTGGAATAAGTGAAAAAGGTGAATTAAGATTAAAGGTAGAGTGTCATGGA ATTTCTGCACATGCAAGTTCTCCAAGTCTTGGTTTGAATGCAATTGAAGGAATATACTCT CTCATACAGTGGATTAAAAAAGATTTACCCTTATCACCTGATGATACAAACCAAACGACA TTTAATATTGGAACAATTAAAGGTGGAAATGCACCAAATGTTGTTGCTGATTATTGTGTT ACAGAGATTGATATTAGAACTTCTTCATATATTTCAGTAGAGGATATTATGAATAATATT AAAACAATAATTGCTTCTATTGAATCTACAACACGGTTTAAATTTGTTCTTTATGAAGAA AGTAAGGAATTACCAGTTACAACTGATATCAATAATAAGTATGTTAAATTATTAACAAAA TGCATTTATAAAGAAATGCCTAAAAGTTCAATCAAAAGAATGGCATATGCAACTGATGCT GCTGCATTTGCCCACACTCAAAACAAACCACAAGTCATAATCTTTGGACCAGGCAATGAA GCAGTTATTCATAAACCAAATGAATATGTTATATTTCAATTTGTAGAAATTGCAACAAAA GCGTTAGTCTCATTTCTTTCTGAAATAAATGAAGAATAA
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  • Fasta :-

    MNIDIDIKFLKTVLRRLIECDTQSFNKDDFEIIKLLKEICEGIGMIVETIPTKNNPNKIN FIAYWTKQPHKIIFSSHFDTVPVGDLKEWKYPPLKATEEIELKTGNVYVYGRGSADMKSG LASQLCILKYLQDMQMKIRDSILLIVSSEEEDGTLGAKDLVKQCPELFTSVELIIVDEPT NLDIGISEKGELRLKVECHGISAHASSPSLGLNAIEGIYSLIQWIKKDLPLSPDDTNQTT FNIGTIKGGNAPNVVADYCVTEIDIRTSSYISVEDIMNNIKTIIASIESTTRFKFVLYEE SKELPVTTDINNKYVKLLTKCIYKEMPKSSIKRMAYATDAAAFAHTQNKPQVIIFGPGNE AVIHKPNEYVIFQFVEIATKALVSFLSEINEE

  • title: metal binding site
  • coordinates: H77,D116,E150,E151,E178,H364
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_082250272 SSSYISVEDI0.998unspEHI_082250272 SSSYISVEDI0.998unspEHI_082250272 SSSYISVEDI0.998unspEHI_082250147 SLLIVSSEEE0.992unspEHI_082250232 SDLPLSPDDT0.997unsp

EHI_082250      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India