EHI_084690 | lecithin:cholesterol acyltransferase domain-containing protein

_IDPredictionOTHERSPmTPCS_Position
EHI_084690SP0.0079800.9917360.000284CS pos: 15-16. IQA-QS. Pr: 0.8371
No Results

  • Fasta :-

    >EHI_084690 MLVIVLLYIICSIQAQSCEKRKPILILSGILASQLMIDADIDTSIELPPQCPHKVKGQIW INRKDLIPFNNSACFIEYMKTYWNSSTSKMENIPGANIYYPNFPSTKGIFALAPDNQKLL QSKTKVFAAMIHDLKAAGWKDGVDLVSPGYDWRYADRSNNNWIEKTTQLIQQLVNNNGYK VIIVTHSFGGLAVLDLISSMSKKFCDQYIDKIITLNAPFIGSTKTLRTFLTGEDLGLKLD PLLLRPLARSWESDYQLMPNQKYWKNDNVVQVGNKKYSANNINAIIDLVEEVKEFGNIIY NSSINRFPLEYVPNNVTLHCLYSHGIETIVGIKYDSLDHDFQDVSYVYGDGDGVVDLQSL EWCKLPGFAKVVKDLGKGEHGTVISNTEVFDYIKNEACATESKIKV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_084690.fa Sequence name : EHI_084690 Sequence length : 406 VALUES OF COMPUTED PARAMETERS Coef20 : 4.414 CoefTot : 0.135 ChDiff : -3 ZoneTo : 37 KR : 3 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.488 2.041 0.401 0.709 MesoH : -0.488 0.496 -0.336 0.237 MuHd_075 : 16.306 14.567 5.119 6.151 MuHd_095 : 17.169 14.481 6.906 4.074 MuHd_100 : 15.753 12.505 6.854 3.231 MuHd_105 : 10.575 10.971 5.631 3.424 Hmax_075 : 13.067 17.800 4.916 3.350 Hmax_095 : 11.200 24.500 4.736 3.631 Hmax_100 : 11.500 18.500 5.084 3.050 Hmax_105 : 12.367 11.000 6.049 2.470 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8996 0.1004 DFMC : 0.9237 0.0763
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 406 EHI_084690 MLVIVLLYIICSIQAQSCEKRKPILILSGILASQLMIDADIDTSIELPPQCPHKVKGQIWINRKDLIPFNNSACFIEYMK 80 TYWNSSTSKMENIPGANIYYPNFPSTKGIFALAPDNQKLLQSKTKVFAAMIHDLKAAGWKDGVDLVSPGYDWRYADRSNN 160 NWIEKTTQLIQQLVNNNGYKVIIVTHSFGGLAVLDLISSMSKKFCDQYIDKIITLNAPFIGSTKTLRTFLTGEDLGLKLD 240 PLLLRPLARSWESDYQLMPNQKYWKNDNVVQVGNKKYSANNINAIIDLVEEVKEFGNIIYNSSINRFPLEYVPNNVTLHC 320 LYSHGIETIVGIKYDSLDHDFQDVSYVYGDGDGVVDLQSLEWCKLPGFAKVVKDLGKGEHGTVISNTEVFDYIKNEACAT 400 ESKIKV 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_084690 20 QAQSCEK|RK 0.056 . EHI_084690 21 AQSCEKR|KP 0.190 . EHI_084690 22 QSCEKRK|PI 0.082 . EHI_084690 54 PPQCPHK|VK 0.081 . EHI_084690 56 QCPHKVK|GQ 0.073 . EHI_084690 63 GQIWINR|KD 0.080 . EHI_084690 64 QIWINRK|DL 0.095 . EHI_084690 80 CFIEYMK|TY 0.056 . EHI_084690 89 WNSSTSK|ME 0.068 . EHI_084690 107 PNFPSTK|GI 0.075 . EHI_084690 118 LAPDNQK|LL 0.057 . EHI_084690 123 QKLLQSK|TK 0.061 . EHI_084690 125 LLQSKTK|VF 0.078 . EHI_084690 135 AMIHDLK|AA 0.072 . EHI_084690 140 LKAAGWK|DG 0.067 . EHI_084690 153 SPGYDWR|YA 0.169 . EHI_084690 157 DWRYADR|SN 0.111 . EHI_084690 165 NNNWIEK|TT 0.068 . EHI_084690 180 VNNNGYK|VI 0.064 . EHI_084690 202 LISSMSK|KF 0.070 . EHI_084690 203 ISSMSKK|FC 0.275 . EHI_084690 211 CDQYIDK|II 0.061 . EHI_084690 224 PFIGSTK|TL 0.064 . EHI_084690 227 GSTKTLR|TF 0.095 . EHI_084690 238 GEDLGLK|LD 0.050 . EHI_084690 245 LDPLLLR|PL 0.073 . EHI_084690 249 LLRPLAR|SW 0.175 . EHI_084690 262 QLMPNQK|YW 0.062 . EHI_084690 265 PNQKYWK|ND 0.067 . EHI_084690 275 VVQVGNK|KY 0.062 . EHI_084690 276 VQVGNKK|YS 0.088 . EHI_084690 293 DLVEEVK|EF 0.067 . EHI_084690 306 YNSSINR|FP 0.092 . EHI_084690 333 ETIVGIK|YD 0.056 . EHI_084690 364 QSLEWCK|LP 0.060 . EHI_084690 370 KLPGFAK|VV 0.084 . EHI_084690 373 GFAKVVK|DL 0.154 . EHI_084690 377 VVKDLGK|GE 0.064 . EHI_084690 394 EVFDYIK|NE 0.054 . EHI_084690 403 ACATESK|IK 0.058 . EHI_084690 405 ATESKIK|V- 0.063 . ____________________________^_________________

  • Fasta :-

    >EHI_084690 ATGTTGGTCATAGTACTGTTATATATTATCTGTTCTATTCAAGCACAGTCTTGTGAAAAA AGAAAACCTATTCTAATACTAAGTGGAATTTTAGCTTCACAGTTAATGATTGATGCTGAT ATAGACACTTCGATAGAATTACCCCCTCAATGTCCTCATAAGGTTAAAGGTCAAATTTGG ATTAACAGAAAAGACCTTATTCCTTTTAACAATTCTGCATGTTTTATTGAATATATGAAA ACATATTGGAATTCTTCTACTAGCAAAATGGAAAACATTCCAGGAGCTAATATATATTAT CCAAACTTTCCATCTACAAAAGGAATTTTTGCTTTAGCACCAGATAACCAAAAACTTCTT CAATCAAAAACTAAAGTATTTGCTGCAATGATTCATGACCTAAAAGCTGCAGGATGGAAA GATGGTGTTGATTTAGTTTCTCCTGGTTATGACTGGAGATATGCAGATAGAAGTAATAAT AACTGGATTGAAAAAACAACTCAACTAATCCAACAATTAGTAAACAATAATGGTTATAAA GTTATCATTGTTACTCATAGTTTTGGTGGACTTGCTGTTTTAGATTTAATTAGTTCTATG TCAAAAAAATTCTGTGACCAATACATTGATAAAATTATCACTCTAAATGCTCCTTTCATT GGTTCAACAAAAACCTTACGAACATTTTTAACAGGAGAAGATTTAGGACTAAAACTTGAT CCATTGTTATTAAGACCATTAGCACGTTCATGGGAATCTGATTACCAATTAATGCCCAAC CAAAAATATTGGAAAAATGATAATGTTGTACAGGTTGGAAATAAAAAATATTCCGCTAAC AACATCAATGCCATCATTGATCTTGTTGAAGAAGTAAAAGAGTTTGGTAATATTATTTAT AACTCAAGCATTAATAGATTTCCATTGGAATATGTTCCAAATAATGTTACATTACATTGT TTATATTCTCATGGTATTGAAACAATTGTTGGAATTAAGTATGACTCCTTGGACCATGAC TTCCAAGATGTTAGTTACGTTTATGGAGATGGAGATGGAGTTGTTGACCTCCAGTCTTTG GAATGGTGTAAACTTCCTGGGTTTGCTAAAGTTGTAAAAGATTTAGGAAAAGGAGAGCAT GGAACAGTAATTTCAAACACAGAAGTTTTTGATTACATAAAAAACGAAGCATGTGCTACC GAATCAAAAATAAAAGTATGA
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  • Fasta :-

    MLVIVLLYIICSIQAQSCEKRKPILILSGILASQLMIDADIDTSIELPPQCPHKVKGQIW INRKDLIPFNNSACFIEYMKTYWNSSTSKMENIPGANIYYPNFPSTKGIFALAPDNQKLL QSKTKVFAAMIHDLKAAGWKDGVDLVSPGYDWRYADRSNNNWIEKTTQLIQQLVNNNGYK VIIVTHSFGGLAVLDLISSMSKKFCDQYIDKIITLNAPFIGSTKTLRTFLTGEDLGLKLD PLLLRPLARSWESDYQLMPNQKYWKNDNVVQVGNKKYSANNINAIIDLVEEVKEFGNIIY NSSINRFPLEYVPNNVTLHCLYSHGIETIVGIKYDSLDHDFQDVSYVYGDGDGVVDLQSL EWCKLPGFAKVVKDLGKGEHGTVISNTEVFDYIKNEACATESKIKV

    No Results
No Results
No Results
IDSitePeptideScoreMethod
EHI_084690250 SPLARSWESD0.994unsp

EHI_084690      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India