EHI_094680 | chaperone clpB, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005524      GO:0016887      

  • Computed_GO_Functions:  ATP binding      ATPase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EHI_094680OTHER0.9998330.0000430.000125
No Results

  • Fasta :-

    >EHI_094680 MNQSEKARLLNLESEIHKRVIGQDEAVTAVSDAIIRSRGGLGNEKRPIGSFMFLGPSGVG KTELAKALAAELFDSEENIVRIDMSEYMESHSVSRLIGAPPGYVGYEEGGQLTEAIRRRP YSVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTVVIMTSNLGSEIIMKGVE TTGQVDEQVKEQVMEIVKKSFKPEFLNRMDDIIVFSPLSEKELKEIVKLQMGEVIKVIKK RYPGSEVEMTEAAIEGIIKAGYSIAYGARPMRRYIEKTVVTEITKSIIGGVMKEKSKIKI GYEDGKIEVKITDN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_094680.fa Sequence name : EHI_094680 Sequence length : 314 VALUES OF COMPUTED PARAMETERS Coef20 : 3.872 CoefTot : -0.177 ChDiff : -4 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.665 1.159 -0.037 0.485 MesoH : -0.982 0.081 -0.473 0.154 MuHd_075 : 13.644 9.633 3.868 3.962 MuHd_095 : 11.252 13.474 5.567 3.763 MuHd_100 : 4.665 10.438 2.459 3.356 MuHd_105 : 16.451 9.623 3.454 3.847 Hmax_075 : -7.933 1.983 -4.224 1.377 Hmax_095 : -7.800 5.200 -2.957 1.383 Hmax_100 : -9.100 3.500 -4.519 1.980 Hmax_105 : -1.750 1.867 -3.909 1.563 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9033 0.0967 DFMC : 0.9494 0.0506
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 314 EHI_094680 MNQSEKARLLNLESEIHKRVIGQDEAVTAVSDAIIRSRGGLGNEKRPIGSFMFLGPSGVGKTELAKALAAELFDSEENIV 80 RIDMSEYMESHSVSRLIGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDFK 160 NTVVIMTSNLGSEIIMKGVETTGQVDEQVKEQVMEIVKKSFKPEFLNRMDDIIVFSPLSEKELKEIVKLQMGEVIKVIKK 240 RYPGSEVEMTEAAIEGIIKAGYSIAYGARPMRRYIEKTVVTEITKSIIGGVMKEKSKIKIGYEDGKIEVKITDN 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .......................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_094680 6 -MNQSEK|AR 0.060 . EHI_094680 8 NQSEKAR|LL 0.103 . EHI_094680 18 LESEIHK|RV 0.079 . EHI_094680 19 ESEIHKR|VI 0.293 . EHI_094680 36 VSDAIIR|SR 0.116 . EHI_094680 38 DAIIRSR|GG 0.084 . EHI_094680 45 GGLGNEK|RP 0.054 . EHI_094680 46 GLGNEKR|PI 0.249 . EHI_094680 61 GPSGVGK|TE 0.071 . EHI_094680 66 GKTELAK|AL 0.074 . EHI_094680 81 SEENIVR|ID 0.076 . EHI_094680 95 ESHSVSR|LI 0.117 . EHI_094680 117 QLTEAIR|RR 0.065 . EHI_094680 118 LTEAIRR|RP 0.087 . EHI_094680 119 TEAIRRR|PY 0.244 . EHI_094680 131 LFDEIEK|AH 0.057 . EHI_094680 148 QLLDEGR|LT 0.089 . EHI_094680 153 GRLTDGR|GR 0.081 . EHI_094680 155 LTDGRGR|TV 0.106 . EHI_094680 160 GRTVDFK|NT 0.069 . EHI_094680 177 GSEIIMK|GV 0.097 . EHI_094680 190 QVDEQVK|EQ 0.054 . EHI_094680 198 QVMEIVK|KS 0.056 . EHI_094680 199 VMEIVKK|SF 0.154 . EHI_094680 202 IVKKSFK|PE 0.060 . EHI_094680 208 KPEFLNR|MD 0.123 . EHI_094680 221 FSPLSEK|EL 0.059 . EHI_094680 224 LSEKELK|EI 0.069 . EHI_094680 228 ELKEIVK|LQ 0.059 . EHI_094680 236 QMGEVIK|VI 0.063 . EHI_094680 239 EVIKVIK|KR 0.061 . EHI_094680 240 VIKVIKK|RY 0.087 . EHI_094680 241 IKVIKKR|YP 0.342 . EHI_094680 259 AIEGIIK|AG 0.059 . EHI_094680 269 SIAYGAR|PM 0.093 . EHI_094680 272 YGARPMR|RY 0.220 . EHI_094680 273 GARPMRR|YI 0.306 . EHI_094680 277 MRRYIEK|TV 0.099 . EHI_094680 285 VVTEITK|SI 0.075 . EHI_094680 293 IIGGVMK|EK 0.073 . EHI_094680 295 GGVMKEK|SK 0.091 . EHI_094680 297 VMKEKSK|IK 0.068 . EHI_094680 299 KEKSKIK|IG 0.065 . EHI_094680 306 IGYEDGK|IE 0.063 . EHI_094680 310 DGKIEVK|IT 0.063 . ____________________________^_________________

  • Fasta :-

    >EHI_094680 ATGAATCAAAGTGAGAAAGCAAGATTACTGAACTTAGAAAGTGAAATACATAAACGAGTA ATAGGACAAGATGAAGCAGTGACAGCAGTTAGTGATGCAATCATTAGAAGTAGAGGAGGA TTAGGAAATGAAAAACGACCAATAGGAAGTTTTATGTTTTTAGGACCAAGTGGAGTAGGT AAAACAGAATTAGCAAAAGCATTAGCAGCTGAATTGTTTGATTCAGAGGAAAATATAGTT AGAATAGATATGAGTGAATATATGGAAAGTCATAGTGTGTCGAGACTGATAGGAGCACCA CCAGGATATGTTGGATATGAAGAAGGAGGACAATTAACAGAAGCAATTCGTCGTAGACCA TATAGTGTAATATTATTTGATGAAATTGAAAAAGCACATCCACAAGTATTTAATGTGTTA TTACAATTATTGGATGAAGGAAGATTAACAGATGGAAGAGGAAGAACAGTTGATTTTAAG AATACGGTTGTGATTATGACATCGAATTTAGGAAGTGAAATAATAATGAAAGGAGTAGAA ACAACAGGACAAGTTGATGAACAAGTTAAAGAACAAGTCATGGAAATAGTGAAGAAGTCG TTTAAACCAGAGTTTCTCAATCGAATGGATGATATTATAGTATTTTCACCACTTTCAGAG AAAGAATTGAAAGAAATAGTTAAATTACAAATGGGAGAAGTGATTAAAGTCATTAAAAAG AGATATCCAGGAAGTGAAGTTGAAATGACGGAAGCAGCAATAGAAGGAATCATTAAAGCA GGATATTCAATAGCATATGGAGCAAGACCAATGCGAAGATATATTGAAAAGACAGTTGTT ACAGAAATAACAAAATCAATAATAGGAGGAGTGATGAAAGAGAAGAGTAAAATTAAGATA GGATATGAAGATGGTAAGATTGAAGTTAAAATAACTGATAACTAA
  • Download Fasta

  • Fasta :-

    MNQSEKARLLNLESEIHKRVIGQDEAVTAVSDAIIRSRGGLGNEKRPIGSFMFLGPSGVG KTELAKALAAELFDSEENIVRIDMSEYMESHSVSRLIGAPPGYVGYEEGGQLTEAIRRRP YSVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTVVIMTSNLGSEIIMKGVE TTGQVDEQVKEQVMEIVKKSFKPEFLNRMDDIIVFSPLSEKELKEIVKLQMGEVIKVIKK RYPGSEVEMTEAAIEGIIKAGYSIAYGARPMRRYIEKTVVTEITKSIIGGVMKEKSKIKI GYEDGKIEVKITDN

  • title: ATP binding site
  • coordinates: P56,S57,G58,V59,G60,K61,T62,E63,D127,N169
No Results
No Results
IDSitePeptideScoreMethod
EHI_094680219 SFSPLSEKEL0.996unsp

EHI_094680      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India