EHI_095840 | retroviral aspartyl protease domain-containing protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EHI_095840OTHER0.9997670.0002180.000015
No Results

  • Fasta :-

    >EHI_095840 MEIVKEQQKIEERIRQEEIERQIKVLEKEHPELLVKGELVFIKVKINGVVKEAMIDCGAQ ETVISIRACKECNLETQIDYRVKKMYQGVGRMETIGVIHLVPIIIGNTYCITTLNVLGDD SPLDHLLIGTNTLKSIGAVIDFSEGVLRIKNDKIKFMSNTDVDYILQKPFHIRQIHGDSS FNKTNPIFKPTLPHFENACLPRYPISLIEQVMIDGKTEEEASEILDKSGGDISFSKIKLY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_095840.fa Sequence name : EHI_095840 Sequence length : 240 VALUES OF COMPUTED PARAMETERS Coef20 : 3.137 CoefTot : 0.000 ChDiff : -5 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.359 1.800 0.289 0.712 MesoH : -0.435 0.544 -0.292 0.285 MuHd_075 : 19.186 17.875 6.757 2.719 MuHd_095 : 20.125 14.791 7.144 5.456 MuHd_100 : 26.357 20.194 8.886 7.129 MuHd_105 : 34.490 23.760 10.629 8.079 Hmax_075 : -19.833 2.217 -6.733 0.187 Hmax_095 : -23.500 -1.500 -6.534 0.341 Hmax_100 : -8.600 7.200 -3.064 2.970 Hmax_105 : -0.467 12.483 -0.726 4.328 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9593 0.0407 DFMC : 0.9777 0.0223
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 240 EHI_095840 MEIVKEQQKIEERIRQEEIERQIKVLEKEHPELLVKGELVFIKVKINGVVKEAMIDCGAQETVISIRACKECNLETQIDY 80 RVKKMYQGVGRMETIGVIHLVPIIIGNTYCITTLNVLGDDSPLDHLLIGTNTLKSIGAVIDFSEGVLRIKNDKIKFMSNT 160 DVDYILQKPFHIRQIHGDSSFNKTNPIFKPTLPHFENACLPRYPISLIEQVMIDGKTEEEASEILDKSGGDISFSKIKLY 240 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_095840 5 --MEIVK|EQ 0.061 . EHI_095840 9 IVKEQQK|IE 0.062 . EHI_095840 13 QQKIEER|IR 0.074 . EHI_095840 15 KIEERIR|QE 0.093 . EHI_095840 21 RQEEIER|QI 0.087 . EHI_095840 24 EIERQIK|VL 0.129 . EHI_095840 28 QIKVLEK|EH 0.058 . EHI_095840 36 HPELLVK|GE 0.058 . EHI_095840 43 GELVFIK|VK 0.062 . EHI_095840 45 LVFIKVK|IN 0.071 . EHI_095840 51 KINGVVK|EA 0.069 . EHI_095840 67 ETVISIR|AC 0.080 . EHI_095840 70 ISIRACK|EC 0.106 . EHI_095840 81 ETQIDYR|VK 0.078 . EHI_095840 83 QIDYRVK|KM 0.067 . EHI_095840 84 IDYRVKK|MY 0.491 . EHI_095840 91 MYQGVGR|ME 0.107 . EHI_095840 134 IGTNTLK|SI 0.099 . EHI_095840 148 FSEGVLR|IK 0.101 . EHI_095840 150 EGVLRIK|ND 0.058 . EHI_095840 153 LRIKNDK|IK 0.069 . EHI_095840 155 IKNDKIK|FM 0.084 . EHI_095840 168 VDYILQK|PF 0.064 . EHI_095840 173 QKPFHIR|QI 0.098 . EHI_095840 183 GDSSFNK|TN 0.074 . EHI_095840 189 KTNPIFK|PT 0.069 . EHI_095840 202 ENACLPR|YP 0.108 . EHI_095840 216 QVMIDGK|TE 0.059 . EHI_095840 227 ASEILDK|SG 0.106 . EHI_095840 236 GDISFSK|IK 0.059 . EHI_095840 238 ISFSKIK|LY 0.067 . ____________________________^_________________

  • Fasta :-

    >EHI_095840 ATGGAAATTGTTAAAGAACAACAGAAAATAGAAGAAAGAATAAGACAAGAAGAAATTGAA AGACAGATAAAAGTTCTAGAAAAAGAACATCCAGAGTTATTAGTTAAAGGAGAATTAGTG TTTATTAAAGTTAAAATTAATGGAGTTGTCAAAGAGGCAATGATAGACTGTGGGGCACAA GAAACAGTAATATCAATCAGAGCATGTAAAGAATGTAATTTAGAAACACAAATAGATTAT AGAGTAAAAAAAATGTATCAAGGAGTAGGAAGAATGGAAACAATAGGGGTCATTCATCTT GTTCCAATAATTATTGGAAATACGTATTGTATTACAACACTGAATGTGCTTGGAGATGAT TCACCACTTGACCATTTGTTAATAGGGACAAACACACTTAAATCAATTGGTGCAGTTATA GACTTTTCTGAAGGTGTGTTAAGAATTAAAAATGACAAGATTAAATTTATGAGTAACACT GATGTTGATTATATTTTGCAGAAACCTTTTCACATTAGACAAATTCATGGTGATTCTTCG TTTAATAAAACTAATCCTATCTTTAAACCCACATTACCTCACTTTGAAAATGCATGTCTT CCTCGATACCCAATTTCTCTTATTGAACAAGTTATGATAGATGGAAAAACTGAAGAAGAA GCAAGTGAAATATTAGACAAGTCAGGAGGTGATATTTCATTCAGTAAAATAAAACTATAT TGA
  • Download Fasta

  • Fasta :-

    MEIVKEQQKIEERIRQEEIERQIKVLEKEHPELLVKGELVFIKVKINGVVKEAMIDCGAQ ETVISIRACKECNLETQIDYRVKKMYQGVGRMETIGVIHLVPIIIGNTYCITTLNVLGDD SPLDHLLIGTNTLKSIGAVIDFSEGVLRIKNDKIKFMSNTDVDYILQKPFHIRQIHGDSS FNKTNPIFKPTLPHFENACLPRYPISLIEQVMIDGKTEEEASEILDKSGGDISFSKIKLY

  • title: catalytic motif
  • coordinates: D56,C57,G58
No Results
No Results
IDSitePeptideScoreMethod
EHI_095840228 SILDKSGGDI0.992unsp

EHI_095840      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India