EHI_115820 | hypothetical protein

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  • Computed_GO_Function_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
EHI_115820OTHER0.9998980.0000570.000044
No Results

  • Fasta :-

    >EHI_115820 MHVCCCQESVRRKLIDRKCWTIIYSHGNSQDLGMCLPFIENLAHQLKCNVVGYDYTGYGR NEGESSERNSVEDLRDVCNYLHDNGITWERMVLMGHSLGGGVSISFASQECGKWGETQEI EMKEDFERKEEKKEEKKEKKIGGMIIISTFTSICGVVSKYAGMVMTDMFENIPKLKHINI PVEVIHGQEDELIGVDESVEIYNSIPDEMRYGYDIINGCKHNDILENDELIKVIKRFLEK TLRNI
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_115820.fa Sequence name : EHI_115820 Sequence length : 245 VALUES OF COMPUTED PARAMETERS Coef20 : 4.484 CoefTot : -0.394 ChDiff : -12 ZoneTo : 7 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.141 1.994 0.514 0.724 MesoH : -0.698 0.333 -0.401 0.262 MuHd_075 : 54.921 31.930 17.242 10.654 MuHd_095 : 13.185 10.580 2.047 3.263 MuHd_100 : 6.966 8.620 1.399 1.781 MuHd_105 : 6.022 6.496 1.638 1.156 Hmax_075 : 18.550 22.633 7.074 5.623 Hmax_095 : -10.588 6.388 -2.377 0.123 Hmax_100 : -14.100 3.100 -2.775 -0.810 Hmax_105 : -7.467 7.817 -0.807 0.280 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5903 0.4097 DFMC : 0.6940 0.3060
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 245 EHI_115820 MHVCCCQESVRRKLIDRKCWTIIYSHGNSQDLGMCLPFIENLAHQLKCNVVGYDYTGYGRNEGESSERNSVEDLRDVCNY 80 LHDNGITWERMVLMGHSLGGGVSISFASQECGKWGETQEIEMKEDFERKEEKKEEKKEKKIGGMIIISTFTSICGVVSKY 160 AGMVMTDMFENIPKLKHINIPVEVIHGQEDELIGVDESVEIYNSIPDEMRYGYDIINGCKHNDILENDELIKVIKRFLEK 240 TLRNI 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ..... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_115820 11 CCQESVR|RK 0.069 . EHI_115820 12 CQESVRR|KL 0.112 . EHI_115820 13 QESVRRK|LI 0.134 . EHI_115820 17 RRKLIDR|KC 0.103 . EHI_115820 18 RKLIDRK|CW 0.089 . EHI_115820 47 NLAHQLK|CN 0.068 . EHI_115820 60 DYTGYGR|NE 0.068 . EHI_115820 68 EGESSER|NS 0.076 . EHI_115820 75 NSVEDLR|DV 0.164 . EHI_115820 90 NGITWER|MV 0.104 . EHI_115820 113 ASQECGK|WG 0.077 . EHI_115820 123 TQEIEMK|ED 0.060 . EHI_115820 128 MKEDFER|KE 0.105 . EHI_115820 129 KEDFERK|EE 0.085 . EHI_115820 132 FERKEEK|KE 0.075 . EHI_115820 133 ERKEEKK|EE 0.102 . EHI_115820 136 EEKKEEK|KE 0.068 . EHI_115820 137 EKKEEKK|EK 0.102 . EHI_115820 139 KEEKKEK|KI 0.102 . EHI_115820 140 EEKKEKK|IG 0.124 . EHI_115820 159 ICGVVSK|YA 0.112 . EHI_115820 174 MFENIPK|LK 0.067 . EHI_115820 176 ENIPKLK|HI 0.069 . EHI_115820 210 SIPDEMR|YG 0.104 . EHI_115820 220 DIINGCK|HN 0.066 . EHI_115820 232 ENDELIK|VI 0.058 . EHI_115820 235 ELIKVIK|RF 0.057 . EHI_115820 236 LIKVIKR|FL 0.279 . EHI_115820 240 IKRFLEK|TL 0.068 . EHI_115820 243 FLEKTLR|NI 0.083 . ____________________________^_________________

  • Fasta :-

    >EHI_115820 ATGCATGTTTGTTGCTGTCAAGAGAGTGTGAGAAGAAAACTGATTGATAGGAAATGCTGG ACAATAATCTACAGCCATGGAAATTCACAAGATTTAGGGATGTGTTTACCATTCATAGAA AATCTAGCACATCAATTAAAATGTAATGTTGTTGGATATGACTATACAGGATATGGTAGA AATGAGGGAGAAAGCAGTGAAAGAAATAGTGTGGAGGATCTTAGGGATGTTTGTAATTAT CTGCATGACAATGGAATAACATGGGAACGAATGGTGTTGATGGGACATTCTCTTGGAGGA GGAGTGAGTATTTCATTTGCAAGTCAGGAATGTGGGAAATGGGGAGAAACACAAGAAATT GAGATGAAAGAGGATTTTGAAAGGAAAGAAGAAAAGAAAGAAGAAAAAAAGGAAAAAAAG ATAGGGGGAATGATTATTATCTCAACATTCACAAGCATTTGTGGAGTGGTAAGTAAATAT GCAGGAATGGTAATGACTGATATGTTTGAAAACATACCAAAATTGAAACATATTAATATT CCAGTTGAAGTAATTCATGGACAAGAAGATGAGTTGATAGGAGTTGATGAGTCAGTAGAA ATCTACAACTCAATTCCAGATGAGATGAGGTATGGATATGATATAATCAATGGATGTAAA CATAATGACATTCTTGAAAATGATGAATTAATTAAAGTAATCAAAAGATTTCTAGAAAAA ACTTTGAGAAATATTTAA
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  • Fasta :-

    MHVCCCQESVRRKLIDRKCWTIIYSHGNSQDLGMCLPFIENLAHQLKCNVVGYDYTGYGR NEGESSERNSVEDLRDVCNYLHDNGITWERMVLMGHSLGGGVSISFASQECGKWGETQEI EMKEDFERKEEKKEEKKEKKIGGMIIISTFTSICGVVSKYAGMVMTDMFENIPKLKHINI PVEVIHGQEDELIGVDESVEIYNSIPDEMRYGYDIINGCKHNDILENDELIKVIKRFLEK TLRNI

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_11582065 SNEGESSERN0.996unspEHI_11582070 SSERNSVEDL0.998unsp

EHI_115820      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India