EHI_117650 | cysteine protease, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_117650SP0.0110500.9889430.000007CS pos: 15-16. SEG-SS. Pr: 0.6169
No Results

  • Fasta :-

    >EHI_117650 MIGVVLVLLVLGSEGSSFNLNEDPVKLFEQFKQEYKKEYVNLVEELRRKAVFIKNVKMMR EHNAKESSYTMGINKFADMEGNELLATSSKIQNNRRMGARRIQEKIKTEKVNLTKQTLKQ AVPANYTLCTSEAEYNYCGTNNIDQNVCGGCYAVGPAQHLSTIYAYLTKQADNNKPKRKM LSAQQLIDCNTESWGGCGGGFAENVLNSVDGIYYADDYPFIDGNTECEDPTDCTRFKHEC KKLNLGYPLKFATSNKFTHFANKNWEEIKEIIYTYHGFISAMKVTESLYRYSGGIYKSQS CTGQITDHVITVDGYGECDGHKFLWVRNSWGNDWGVEGGHFKIDWDTLCGINGIDHYEDG SQLQNNLYVEMELGDGDTADYNPQDGAGENKQDPIGCVVVSPTGDNDNKTTGIVITLFVL LMTFFI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_117650.fa Sequence name : EHI_117650 Sequence length : 426 VALUES OF COMPUTED PARAMETERS Coef20 : 4.110 CoefTot : 0.100 ChDiff : -13 ZoneTo : 13 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.541 2.376 0.439 0.836 MesoH : -0.925 -0.184 -0.464 0.139 MuHd_075 : 9.959 5.523 2.639 1.223 MuHd_095 : 7.412 0.801 1.673 0.773 MuHd_100 : 10.105 4.842 2.446 1.831 MuHd_105 : 10.688 8.488 2.849 3.114 Hmax_075 : 17.733 20.417 3.481 6.440 Hmax_095 : 16.500 18.200 3.435 6.560 Hmax_100 : 18.900 20.300 3.411 6.720 Hmax_105 : 16.700 17.617 3.476 6.300 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9986 0.0014 DFMC : 0.9961 0.0039
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 426 EHI_117650 MIGVVLVLLVLGSEGSSFNLNEDPVKLFEQFKQEYKKEYVNLVEELRRKAVFIKNVKMMREHNAKESSYTMGINKFADME 80 GNELLATSSKIQNNRRMGARRIQEKIKTEKVNLTKQTLKQAVPANYTLCTSEAEYNYCGTNNIDQNVCGGCYAVGPAQHL 160 STIYAYLTKQADNNKPKRKMLSAQQLIDCNTESWGGCGGGFAENVLNSVDGIYYADDYPFIDGNTECEDPTDCTRFKHEC 240 KKLNLGYPLKFATSNKFTHFANKNWEEIKEIIYTYHGFISAMKVTESLYRYSGGIYKSQSCTGQITDHVITVDGYGECDG 320 HKFLWVRNSWGNDWGVEGGHFKIDWDTLCGINGIDHYEDGSQLQNNLYVEMELGDGDTADYNPQDGAGENKQDPIGCVVV 400 SPTGDNDNKTTGIVITLFVLLMTFFI 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .......................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_117650 26 LNEDPVK|LF 0.065 . EHI_117650 32 KLFEQFK|QE 0.069 . EHI_117650 36 QFKQEYK|KE 0.058 . EHI_117650 37 FKQEYKK|EY 0.089 . EHI_117650 47 NLVEELR|RK 0.070 . EHI_117650 48 LVEELRR|KA 0.105 . EHI_117650 49 VEELRRK|AV 0.097 . EHI_117650 54 RKAVFIK|NV 0.100 . EHI_117650 57 VFIKNVK|MM 0.056 . EHI_117650 60 KNVKMMR|EH 0.112 . EHI_117650 65 MREHNAK|ES 0.075 . EHI_117650 75 YTMGINK|FA 0.081 . EHI_117650 90 LLATSSK|IQ 0.063 . EHI_117650 95 SKIQNNR|RM 0.105 . EHI_117650 96 KIQNNRR|MG 0.111 . EHI_117650 100 NRRMGAR|RI 0.142 . EHI_117650 101 RRMGARR|IQ 0.220 . EHI_117650 105 ARRIQEK|IK 0.076 . EHI_117650 107 RIQEKIK|TE 0.066 . EHI_117650 110 EKIKTEK|VN 0.061 . EHI_117650 115 EKVNLTK|QT 0.061 . EHI_117650 119 LTKQTLK|QA 0.069 . EHI_117650 169 IYAYLTK|QA 0.069 . EHI_117650 175 KQADNNK|PK 0.071 . EHI_117650 177 ADNNKPK|RK 0.070 . EHI_117650 178 DNNKPKR|KM 0.175 . EHI_117650 179 NNKPKRK|ML 0.163 . EHI_117650 235 DPTDCTR|FK 0.084 . EHI_117650 237 TDCTRFK|HE 0.076 . EHI_117650 241 RFKHECK|KL 0.065 . EHI_117650 242 FKHECKK|LN 0.090 . EHI_117650 250 NLGYPLK|FA 0.074 . EHI_117650 256 KFATSNK|FT 0.080 . EHI_117650 263 FTHFANK|NW 0.073 . EHI_117650 269 KNWEEIK|EI 0.069 . EHI_117650 283 GFISAMK|VT 0.062 . EHI_117650 290 VTESLYR|YS 0.121 . EHI_117650 297 YSGGIYK|SQ 0.078 . EHI_117650 322 GECDGHK|FL 0.065 . EHI_117650 327 HKFLWVR|NS 0.090 . EHI_117650 342 VEGGHFK|ID 0.070 . EHI_117650 391 DGAGENK|QD 0.062 . EHI_117650 409 TGDNDNK|TT 0.079 . ____________________________^_________________

  • Fasta :-

    >EHI_117650 ATGATAGGAGTTGTTTTAGTTTTGCTAGTATTAGGAAGTGAAGGAAGTTCATTTAATTTA AATGAAGATCCAGTTAAGTTATTTGAGCAATTTAAACAAGAATATAAAAAAGAATATGTA AATCTTGTTGAAGAATTAAGAAGAAAAGCTGTTTTCATAAAAAATGTAAAAATGATGAGA GAGCACAATGCAAAAGAAAGTTCATATACAATGGGAATTAATAAATTTGCAGATATGGAA GGTAATGAACTTCTTGCAACATCAAGTAAAATACAAAATAATAGAAGAATGGGTGCTAGA AGAATTCAAGAAAAAATTAAAACAGAAAAAGTAAATTTAACAAAACAAACTCTTAAACAA GCTGTTCCAGCTAATTATACATTATGTACTTCTGAAGCTGAATATAATTATTGTGGAACC AATAATATTGACCAAAATGTATGTGGTGGATGTTATGCTGTTGGACCAGCACAACATTTA TCAACAATCTATGCTTACTTAACTAAACAAGCTGATAATAATAAACCAAAACGAAAAATG TTATCTGCCCAACAATTAATTGATTGTAATACTGAATCATGGGGTGGATGTGGAGGAGGA TTTGCTGAAAATGTTCTTAATTCTGTAGATGGAATTTATTATGCAGATGATTATCCATTT ATTGATGGTAATACAGAATGTGAAGACCCTACTGATTGTACAAGATTTAAACATGAATGT AAGAAATTAAATCTTGGTTATCCATTAAAATTTGCTACTAGTAATAAATTTACTCACTTT GCCAATAAAAATTGGGAAGAAATAAAAGAAATTATTTATACATATCATGGATTTATTAGT GCAATGAAAGTTACTGAATCATTATATAGATATTCAGGTGGTATTTATAAATCTCAAAGT TGTACTGGACAAATTACTGACCATGTTATTACTGTTGATGGTTATGGAGAATGTGATGGA CATAAATTCCTTTGGGTAAGAAATTCATGGGGAAATGATTGGGGAGTTGAAGGTGGACAT TTCAAAATTGATTGGGATACTCTTTGTGGAATTAATGGTATTGATCATTATGAAGATGGT TCTCAACTTCAAAATAATTTATATGTTGAAATGGAATTAGGAGATGGTGATACTGCTGAT TACAATCCTCAAGATGGTGCAGGTGAAAACAAGCAAGACCCAATTGGTTGTGTTGTTGTT AGTCCAACTGGTGATAATGATAACAAAACAACAGGAATTGTTATTACTTTATTCGTCTTA TTAATGACTTTCTTCATCTAA
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  • Fasta :-

    MIGVVLVLLVLGSEGSSFNLNEDPVKLFEQFKQEYKKEYVNLVEELRRKAVFIKNVKMMR EHNAKESSYTMGINKFADMEGNELLATSSKIQNNRRMGARRIQEKIKTEKVNLTKQTLKQ AVPANYTLCTSEAEYNYCGTNNIDQNVCGGCYAVGPAQHLSTIYAYLTKQADNNKPKRKM LSAQQLIDCNTESWGGCGGGFAENVLNSVDGIYYADDYPFIDGNTECEDPTDCTRFKHEC KKLNLGYPLKFATSNKFTHFANKNWEEIKEIIYTYHGFISAMKVTESLYRYSGGIYKSQS CTGQITDHVITVDGYGECDGHKFLWVRNSWGNDWGVEGGHFKIDWDTLCGINGIDHYEDG SQLQNNLYVEMELGDGDTADYNPQDGAGENKQDPIGCVVVSPTGDNDNKTTGIVITLFVL LMTFFI

  • title: active site
  • coordinates: Q145,C151,H308,N328
No Results
No Results
No Results

EHI_117650      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India