EHI_123950 | cysteine protease, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_123950SP0.0211990.9787950.000007CS pos: 15-16. SEG-NS. Pr: 0.6331
No Results

  • Fasta :-

    >EHI_123950 MIGVVLVLLVLGSEGNSFNLNEDPLKLFEQFKQEYKKEYLTVAEELRRKAIFIQNVEMMR EHNAKGSSYRMGINKFADMESNELLATSSIIQSNRRMGAKRIQEMIRMEKVYSTKQTLKQ AVPDNYTLCTSEAEYNYCGTNNIDQNLCGGCYAIATAHHLSTIYAYLTKQVDNNKPKRKM LSAQQLLDCNTESWGGCGGGFAEDVLDSVDGIYYADDYPFIDADKDCENVTDCAKYRHEC KSLEIDYPLKFATSNKFTHFANKNWEEIKEIIYKYHGFISAMKVTDSLLRYVGGIYKSES CTGKITDHIVVVDGYGECDGHKFLWVRSSWGNDWGVENGHFKIDWNTLCGINGVDEYDDG SQLQNNLYVEM
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_123950.fa Sequence name : EHI_123950 Sequence length : 371 VALUES OF COMPUTED PARAMETERS Coef20 : 3.976 CoefTot : 0.100 ChDiff : -13 ZoneTo : 13 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.153 1.735 0.169 0.645 MesoH : -0.993 -0.094 -0.469 0.139 MuHd_075 : 5.171 3.832 1.006 0.642 MuHd_095 : 2.013 2.773 0.472 1.261 MuHd_100 : 6.992 4.707 1.304 1.913 MuHd_105 : 10.635 9.744 2.387 3.328 Hmax_075 : 17.733 20.417 3.481 6.440 Hmax_095 : 16.500 18.200 3.435 6.560 Hmax_100 : 18.900 20.300 3.411 6.720 Hmax_105 : 16.700 17.400 3.394 6.300 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9954 0.0046 DFMC : 0.9944 0.0056
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 371 EHI_123950 MIGVVLVLLVLGSEGNSFNLNEDPLKLFEQFKQEYKKEYLTVAEELRRKAIFIQNVEMMREHNAKGSSYRMGINKFADME 80 SNELLATSSIIQSNRRMGAKRIQEMIRMEKVYSTKQTLKQAVPDNYTLCTSEAEYNYCGTNNIDQNLCGGCYAIATAHHL 160 STIYAYLTKQVDNNKPKRKMLSAQQLLDCNTESWGGCGGGFAEDVLDSVDGIYYADDYPFIDADKDCENVTDCAKYRHEC 240 KSLEIDYPLKFATSNKFTHFANKNWEEIKEIIYKYHGFISAMKVTDSLLRYVGGIYKSESCTGKITDHIVVVDGYGECDG 320 HKFLWVRSSWGNDWGVENGHFKIDWNTLCGINGVDEYDDGSQLQNNLYVEM 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_123950 26 LNEDPLK|LF 0.064 . EHI_123950 32 KLFEQFK|QE 0.071 . EHI_123950 36 QFKQEYK|KE 0.053 . EHI_123950 37 FKQEYKK|EY 0.100 . EHI_123950 47 TVAEELR|RK 0.076 . EHI_123950 48 VAEELRR|KA 0.121 . EHI_123950 49 AEELRRK|AI 0.086 . EHI_123950 60 QNVEMMR|EH 0.086 . EHI_123950 65 MREHNAK|GS 0.087 . EHI_123950 70 AKGSSYR|MG 0.131 . EHI_123950 75 YRMGINK|FA 0.090 . EHI_123950 95 SIIQSNR|RM 0.118 . EHI_123950 96 IIQSNRR|MG 0.113 . EHI_123950 100 NRRMGAK|RI 0.087 . EHI_123950 101 RRMGAKR|IQ 0.310 . EHI_123950 107 RIQEMIR|ME 0.079 . EHI_123950 110 EMIRMEK|VY 0.124 . EHI_123950 115 EKVYSTK|QT 0.065 . EHI_123950 119 STKQTLK|QA 0.068 . EHI_123950 169 IYAYLTK|QV 0.076 . EHI_123950 175 KQVDNNK|PK 0.066 . EHI_123950 177 VDNNKPK|RK 0.069 . EHI_123950 178 DNNKPKR|KM 0.173 . EHI_123950 179 NNKPKRK|ML 0.156 . EHI_123950 225 PFIDADK|DC 0.069 . EHI_123950 235 NVTDCAK|YR 0.059 . EHI_123950 237 TDCAKYR|HE 0.130 . EHI_123950 241 KYRHECK|SL 0.092 . EHI_123950 250 EIDYPLK|FA 0.068 . EHI_123950 256 KFATSNK|FT 0.080 . EHI_123950 263 FTHFANK|NW 0.073 . EHI_123950 269 KNWEEIK|EI 0.073 . EHI_123950 274 IKEIIYK|YH 0.074 . EHI_123950 283 GFISAMK|VT 0.065 . EHI_123950 290 VTDSLLR|YV 0.141 . EHI_123950 297 YVGGIYK|SE 0.069 . EHI_123950 304 SESCTGK|IT 0.088 . EHI_123950 322 GECDGHK|FL 0.062 . EHI_123950 327 HKFLWVR|SS 0.137 . EHI_123950 342 VENGHFK|ID 0.070 . ____________________________^_________________

  • Fasta :-

    >EHI_123950 ATGATAGGAGTTGTTTTAGTTTTGCTTGTATTAGGAAGTGAAGGAAATTCGTTTAATTTA AATGAAGATCCACTAAAGTTGTTTGAGCAATTTAAACAAGAATATAAAAAAGAGTATTTG ACTGTTGCTGAAGAGTTAAGAAGAAAAGCTATCTTTATACAAAATGTTGAGATGATGAGA GAGCACAATGCAAAAGGAAGTTCTTATAGAATGGGAATTAATAAATTTGCAGATATGGAA AGCAATGAACTTCTTGCAACATCAAGTATAATCCAAAGTAATAGAAGAATGGGTGCAAAA AGAATTCAAGAAATGATTCGAATGGAAAAAGTATATTCAACAAAACAAACTCTTAAACAA GCTGTTCCAGATAATTATACATTATGTACTTCTGAAGCTGAATATAATTATTGTGGAACC AATAATATTGACCAAAATTTATGTGGTGGATGTTATGCAATTGCAACAGCACATCATTTA TCAACAATCTATGCCTATTTAACTAAACAAGTTGATAATAATAAACCAAAACGAAAAATG TTATCTGCCCAACAATTGCTTGATTGTAATACCGAGTCATGGGGTGGATGTGGAGGAGGA TTTGCTGAAGATGTTCTTGATTCTGTAGATGGAATTTATTATGCAGATGATTATCCATTT ATTGACGCTGATAAAGATTGTGAAAATGTTACAGATTGTGCAAAATATAGACATGAATGT AAATCACTAGAAATCGATTATCCATTAAAATTTGCTACTAGTAATAAATTTACTCACTTT GCCAATAAAAATTGGGAAGAAATAAAAGAAATTATTTATAAATATCATGGATTTATTAGT GCAATGAAAGTTACTGATTCATTATTGAGATATGTAGGTGGTATTTATAAGTCTGAAAGT TGTACTGGAAAAATTACTGATCATATTGTTGTTGTTGATGGTTATGGAGAATGTGATGGA CATAAATTCCTTTGGGTAAGAAGCTCTTGGGGAAATGATTGGGGAGTTGAGAATGGACAT TTCAAAATTGATTGGAACACTCTTTGTGGTATTAATGGCGTTGATGAATATGACGATGGT TCTCAACTTCAAAATAATTTATATGTTGAAATGTAA
  • Download Fasta

  • Fasta :-

    MIGVVLVLLVLGSEGNSFNLNEDPLKLFEQFKQEYKKEYLTVAEELRRKAIFIQNVEMMR EHNAKGSSYRMGINKFADMESNELLATSSIIQSNRRMGAKRIQEMIRMEKVYSTKQTLKQ AVPDNYTLCTSEAEYNYCGTNNIDQNLCGGCYAIATAHHLSTIYAYLTKQVDNNKPKRKM LSAQQLLDCNTESWGGCGGGFAEDVLDSVDGIYYADDYPFIDADKDCENVTDCAKYRHEC KSLEIDYPLKFATSNKFTHFANKNWEEIKEIIYKYHGFISAMKVTDSLLRYVGGIYKSES CTGKITDHIVVVDGYGECDGHKFLWVRSSWGNDWGVENGHFKIDWNTLCGINGVDEYDDG SQLQNNLYVEM

  • title: active site
  • coordinates: Q145,C151,H308,S328
No Results
No Results
IDSitePeptideScoreMethod
EHI_123950113 SEKVYSTKQT0.992unsp

EHI_123950      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India