EHI_128190 | peptidase S54 (rhomboid) family protein

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EHI_128190OTHER0.9999940.0000040.000003
No Results

  • Fasta :-

    >EHI_128190 MENTTLVSLYNVEQKDNNNENDQTSIKIDRSSSSSSEESFQGFSFSTILLPHHSNEKEEG FVDIDGYITPFENEINIFKQILYCVFPCLIPPFISNRRIEKYIRATMSISFIFTLLLIGV FIGELCVCGVASFSINPGIGPSADKIIDFGAKYSYNITQNYQIYRLFTSLFLSPSLFGLI VEIIFALRFFLYFEHRWGIILFFVTYIISGEAGVLLSCVLSCNNIAVCSMGPFAGLISVF LVDLALTNQSYKVQFKRAVFTSLIGLLVIVFAQLFPLQDFTCLLGSVIVGLVLGVLYFVN LNPWFSQQPLLLQTIVYVSLVTFLLTYFIVFCLLLFIWIQPLQITISAQTN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_128190.fa Sequence name : EHI_128190 Sequence length : 351 VALUES OF COMPUTED PARAMETERS Coef20 : 3.195 CoefTot : 0.000 ChDiff : -7 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.653 2.794 0.558 0.995 MesoH : 1.513 1.752 0.191 0.668 MuHd_075 : 11.930 5.598 2.738 1.251 MuHd_095 : 14.615 11.134 5.173 2.727 MuHd_100 : 12.307 10.371 3.770 2.401 MuHd_105 : 8.435 8.083 1.408 1.952 Hmax_075 : -5.133 0.087 -4.353 0.648 Hmax_095 : 2.600 4.200 -1.108 1.660 Hmax_100 : -4.600 1.400 -3.467 0.970 Hmax_105 : -5.900 4.783 -3.338 1.878 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9912 0.0088 DFMC : 0.9863 0.0137
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 351 EHI_128190 MENTTLVSLYNVEQKDNNNENDQTSIKIDRSSSSSSEESFQGFSFSTILLPHHSNEKEEGFVDIDGYITPFENEINIFKQ 80 ILYCVFPCLIPPFISNRRIEKYIRATMSISFIFTLLLIGVFIGELCVCGVASFSINPGIGPSADKIIDFGAKYSYNITQN 160 YQIYRLFTSLFLSPSLFGLIVEIIFALRFFLYFEHRWGIILFFVTYIISGEAGVLLSCVLSCNNIAVCSMGPFAGLISVF 240 LVDLALTNQSYKVQFKRAVFTSLIGLLVIVFAQLFPLQDFTCLLGSVIVGLVLGVLYFVNLNPWFSQQPLLLQTIVYVSL 320 VTFLLTYFIVFCLLLFIWIQPLQITISAQTN 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_128190 15 LYNVEQK|DN 0.082 . EHI_128190 27 NDQTSIK|ID 0.062 . EHI_128190 30 TSIKIDR|SS 0.158 . EHI_128190 57 PHHSNEK|EE 0.063 . EHI_128190 79 NEINIFK|QI 0.059 . EHI_128190 97 PPFISNR|RI 0.119 . EHI_128190 98 PFISNRR|IE 0.107 . EHI_128190 101 SNRRIEK|YI 0.182 . EHI_128190 104 RIEKYIR|AT 0.091 . EHI_128190 145 IGPSADK|II 0.065 . EHI_128190 152 IIDFGAK|YS 0.066 . EHI_128190 165 QNYQIYR|LF 0.082 . EHI_128190 188 EIIFALR|FF 0.078 . EHI_128190 196 FLYFEHR|WG 0.084 . EHI_128190 252 LTNQSYK|VQ 0.060 . EHI_128190 256 SYKVQFK|RA 0.059 . EHI_128190 257 YKVQFKR|AV 0.446 . ____________________________^_________________

  • Fasta :-

    >EHI_128190 ATGGAAAATACCACACTTGTCTCTCTTTATAATGTCGAACAAAAAGATAATAATAATGAA AATGATCAAACGTCAATTAAAATAGATAGAAGTTCATCTTCTTCAAGTGAAGAAAGTTTT CAAGGTTTTAGTTTTAGTACAATACTTCTTCCACATCATTCAAATGAAAAAGAAGAAGGG TTTGTTGATATTGATGGATATATAACTCCATTTGAGAATGAAATAAATATTTTTAAACAA ATACTGTATTGTGTATTTCCATGTTTAATACCACCATTTATTTCTAATAGAAGAATAGAA AAATATATAAGAGCAACAATGTCTATATCTTTTATTTTCACATTATTATTGATTGGAGTA TTTATTGGAGAATTATGTGTATGTGGAGTTGCATCGTTCTCAATAAATCCAGGGATAGGT CCAAGTGCAGATAAAATAATAGATTTTGGAGCAAAATATTCATATAATATAACTCAAAAT TATCAAATATATCGACTTTTTACATCATTATTTCTTAGTCCATCATTATTTGGGTTAATA GTTGAAATTATATTTGCACTAAGATTTTTCTTATATTTTGAGCATAGATGGGGAATAATA TTATTCTTTGTTACGTATATTATTAGTGGAGAGGCAGGGGTGTTATTAAGTTGTGTATTA AGTTGTAATAATATTGCAGTATGTTCTATGGGACCATTTGCTGGATTAATATCAGTATTT CTTGTTGACTTAGCGTTAACAAACCAAAGTTATAAAGTACAATTTAAAAGAGCAGTTTTT ACATCATTAATAGGTCTTTTAGTAATAGTATTTGCACAATTATTTCCATTACAAGATTTT ACATGTTTATTAGGAAGTGTTATTGTTGGGTTAGTTCTTGGAGTGTTATATTTTGTTAAT TTAAATCCATGGTTTTCTCAACAACCATTATTACTACAGACAATTGTTTATGTTTCATTG GTGACATTTCTTTTAACATATTTTATTGTTTTTTGTTTATTATTATTCATATGGATTCAA CCTTTACAAATTACTATATCAGCTCAAACAAATTGA
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  • Fasta :-

    MENTTLVSLYNVEQKDNNNENDQTSIKIDRSSSSSSEESFQGFSFSTILLPHHSNEKEEG FVDIDGYITPFENEINIFKQILYCVFPCLIPPFISNRRIEKYIRATMSISFIFTLLLIGV FIGELCVCGVASFSINPGIGPSADKIIDFGAKYSYNITQNYQIYRLFTSLFLSPSLFGLI VEIIFALRFFLYFEHRWGIILFFVTYIISGEAGVLLSCVLSCNNIAVCSMGPFAGLISVF LVDLALTNQSYKVQFKRAVFTSLIGLLVIVFAQLFPLQDFTCLLGSVIVGLVLGVLYFVN LNPWFSQQPLLLQTIVYVSLVTFLLTYFIVFCLLLFIWIQPLQITISAQTN

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_12819034 SRSSSSSSEE0.996unspEHI_12819034 SRSSSSSSEE0.996unspEHI_12819034 SRSSSSSSEE0.996unspEHI_12819035 SSSSSSSEES0.998unspEHI_12819036 SSSSSSEESF0.993unspEHI_12819032 SIDRSSSSSS0.997unspEHI_12819033 SDRSSSSSSE0.996unsp

EHI_128190      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India