EHI_130660 | microtubule associated protein, putative

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_IDPredictionOTHERSPmTPCS_Position
EHI_130660OTHER0.9975390.0001530.002307
No Results

  • Fasta :-

    >EHI_130660 MESQPKLPFKQRVSFEERKAFAIQLRQKKPNYVPLVVESDGTSNAIELKKDRFFIPEDSK VSDFVKVLVDKYIETDGETPISTVSVKIQTPSKAIQPSNEDTIGSLYAMYQEEDGYLYFI VYRESVFGN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_130660.fa Sequence name : EHI_130660 Sequence length : 129 VALUES OF COMPUTED PARAMETERS Coef20 : 3.605 CoefTot : -0.794 ChDiff : -3 ZoneTo : 15 KR : 3 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : -0.035 0.706 -0.276 0.336 MesoH : -1.330 -0.176 -0.579 0.099 MuHd_075 : 27.256 8.747 6.830 3.332 MuHd_095 : 16.971 4.646 4.512 3.138 MuHd_100 : 13.591 2.526 3.376 2.168 MuHd_105 : 8.545 2.576 1.550 0.605 Hmax_075 : 2.800 1.400 -3.005 1.727 Hmax_095 : -12.800 -5.075 -5.565 -0.577 Hmax_100 : -10.100 -3.700 -5.103 0.040 Hmax_105 : -8.925 -1.167 -5.041 0.040 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9920 0.0080 DFMC : 0.9801 0.0199
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 129 EHI_130660 MESQPKLPFKQRVSFEERKAFAIQLRQKKPNYVPLVVESDGTSNAIELKKDRFFIPEDSKVSDFVKVLVDKYIETDGETP 80 ISTVSVKIQTPSKAIQPSNEDTIGSLYAMYQEEDGYLYFIVYRESVFGN 160 ................................................................................ 80 ................................................. 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_130660 6 -MESQPK|LP 0.064 . EHI_130660 10 QPKLPFK|QR 0.066 . EHI_130660 12 KLPFKQR|VS 0.108 . EHI_130660 18 RVSFEER|KA 0.128 . EHI_130660 19 VSFEERK|AF 0.092 . EHI_130660 26 AFAIQLR|QK 0.084 . EHI_130660 28 AIQLRQK|KP 0.060 . EHI_130660 29 IQLRQKK|PN 0.198 . EHI_130660 49 SNAIELK|KD 0.063 . EHI_130660 50 NAIELKK|DR 0.115 . EHI_130660 52 IELKKDR|FF 0.100 . EHI_130660 60 FIPEDSK|VS 0.054 . EHI_130660 66 KVSDFVK|VL 0.067 . EHI_130660 71 VKVLVDK|YI 0.081 . EHI_130660 87 ISTVSVK|IQ 0.065 . EHI_130660 93 KIQTPSK|AI 0.071 . EHI_130660 123 LYFIVYR|ES 0.076 . ____________________________^_________________

  • Fasta :-

    >EHI_130660 ATGGAATCACAACCAAAACTTCCTTTTAAACAACGAGTTTCTTTTGAAGAACGTAAAGCA TTTGCTATTCAATTAAGACAAAAGAAACCAAATTATGTTCCACTTGTTGTTGAAAGTGAT GGAACTTCAAATGCCATTGAATTAAAGAAAGATAGATTCTTTATTCCTGAAGATTCAAAA GTTAGTGATTTTGTTAAAGTCTTAGTTGATAAATACATTGAAACTGATGGGGAAACTCCA ATTTCAACTGTTTCTGTTAAAATTCAAACACCAAGTAAAGCTATTCAACCATCAAATGAA GATACTATTGGTTCACTTTATGCTATGTATCAAGAAGAAGATGGGTATCTTTATTTCATT GTTTACAGAGAATCTGTCTTTGGAAATTAA
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  • Fasta :-

    MESQPKLPFKQRVSFEERKAFAIQLRQKKPNYVPLVVESDGTSNAIELKKDRFFIPEDSK VSDFVKVLVDKYIETDGETPISTVSVKIQTPSKAIQPSNEDTIGSLYAMYQEEDGYLYFI VYRESVFGN

    No Results
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
EHI_130660T900.6400.054EHI_130660T830.5660.083
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
EHI_130660T900.6400.054EHI_130660T830.5660.083
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_13066014 SKQRVSFEER0.998unspEHI_13066098 SAIQPSNEDT0.996unsp

EHI_130660      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India