EHI_137730 | ubiquitin carboxyl-terminal hydrolase domain containing protein

_IDPredictionOTHERSPmTPCS_Position
EHI_137730OTHER0.9914480.0027570.005795
No Results

  • Fasta :-

    >EHI_137730 MSFLTLFNTSKIKGTNGLYNLGNTCYMNAVIQCIAHTKQFLEYSLQYQLKVYINENNTKC SLIENVTESLIKTIQTLYTRKESIYPQYFFTTFGIYNQQFSDKKQKDAAEFLLLLLDVMD NDLRGTSIIQPPPIIHNEVYYKDYIEYIKNNKSIITQMTTGIVVSNFCCEICGISSTHSE PFSLLQLPIIKNLSFFKKVNFKNYSELKELKYITIYDCLIGYLYSFQTCVNCNHTQIHNK EFVVTPPILIIQILRFEQHSNNTQKDQTTILFPLNDFVIGVTKYQLYATIDHTGSINHGH FTANCKINNLWYHFDDETVKPLNKIDIVSKKSYILFYERI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_137730.fa Sequence name : EHI_137730 Sequence length : 340 VALUES OF COMPUTED PARAMETERS Coef20 : 3.942 CoefTot : -1.506 ChDiff : 2 ZoneTo : 41 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.324 1.418 0.349 0.486 MesoH : -0.340 0.400 -0.294 0.236 MuHd_075 : 22.906 23.447 9.125 6.624 MuHd_095 : 24.298 19.561 9.804 6.293 MuHd_100 : 23.310 19.378 9.891 5.331 MuHd_105 : 24.190 19.544 9.797 5.672 Hmax_075 : 15.983 21.700 5.431 5.985 Hmax_095 : 11.463 12.250 4.997 4.751 Hmax_100 : 12.400 15.800 3.556 5.300 Hmax_105 : 11.000 19.000 3.358 5.680 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6646 0.3354 DFMC : 0.6193 0.3807
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 340 EHI_137730 MSFLTLFNTSKIKGTNGLYNLGNTCYMNAVIQCIAHTKQFLEYSLQYQLKVYINENNTKCSLIENVTESLIKTIQTLYTR 80 KESIYPQYFFTTFGIYNQQFSDKKQKDAAEFLLLLLDVMDNDLRGTSIIQPPPIIHNEVYYKDYIEYIKNNKSIITQMTT 160 GIVVSNFCCEICGISSTHSEPFSLLQLPIIKNLSFFKKVNFKNYSELKELKYITIYDCLIGYLYSFQTCVNCNHTQIHNK 240 EFVVTPPILIIQILRFEQHSNNTQKDQTTILFPLNDFVIGVTKYQLYATIDHTGSINHGHFTANCKINNLWYHFDDETVK 320 PLNKIDIVSKKSYILFYERI 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_137730 11 TLFNTSK|IK 0.071 . EHI_137730 13 FNTSKIK|GT 0.065 . EHI_137730 38 QCIAHTK|QF 0.062 . EHI_137730 50 SLQYQLK|VY 0.076 . EHI_137730 59 INENNTK|CS 0.065 . EHI_137730 72 VTESLIK|TI 0.059 . EHI_137730 80 IQTLYTR|KE 0.073 . EHI_137730 81 QTLYTRK|ES 0.066 . EHI_137730 103 NQQFSDK|KQ 0.066 . EHI_137730 104 QQFSDKK|QK 0.117 . EHI_137730 106 FSDKKQK|DA 0.085 . EHI_137730 124 VMDNDLR|GT 0.093 . EHI_137730 142 HNEVYYK|DY 0.080 . EHI_137730 149 DYIEYIK|NN 0.061 . EHI_137730 152 EYIKNNK|SI 0.090 . EHI_137730 191 LQLPIIK|NL 0.057 . EHI_137730 197 KNLSFFK|KV 0.071 . EHI_137730 198 NLSFFKK|VN 0.134 . EHI_137730 202 FKKVNFK|NY 0.065 . EHI_137730 208 KNYSELK|EL 0.060 . EHI_137730 211 SELKELK|YI 0.066 . EHI_137730 240 HTQIHNK|EF 0.064 . EHI_137730 255 LIIQILR|FE 0.087 . EHI_137730 265 HSNNTQK|DQ 0.104 . EHI_137730 283 FVIGVTK|YQ 0.059 . EHI_137730 306 HFTANCK|IN 0.056 . EHI_137730 320 FDDETVK|PL 0.061 . EHI_137730 324 TVKPLNK|ID 0.059 . EHI_137730 330 KIDIVSK|KS 0.058 . EHI_137730 331 IDIVSKK|SY 0.142 . EHI_137730 339 YILFYER|I- 0.072 . ____________________________^_________________

  • Fasta :-

    >EHI_137730 ATGTCATTTTTAACTTTGTTCAATACATCAAAAATTAAAGGAACAAATGGACTTTATAAT TTAGGTAATACATGTTATATGAATGCTGTAATACAATGCATTGCACATACCAAACAATTT TTAGAATATTCATTACAATATCAATTAAAAGTTTATATAAATGAAAATAACACAAAATGT TCATTAATAGAAAATGTTACCGAATCTTTAATAAAAACAATTCAAACATTATACACTCGT AAAGAATCAATTTATCCTCAATATTTTTTTACTACATTTGGTATTTATAACCAACAATTT TCTGATAAAAAACAAAAAGATGCTGCAGAATTTTTGTTATTATTACTTGATGTTATGGAC AATGATCTTCGAGGTACAAGTATTATTCAACCACCACCTATAATACATAATGAAGTTTAT TATAAAGATTATATTGAATATATTAAAAATAATAAATCAATTATTACTCAAATGACAACT GGAATAGTTGTAAGTAATTTTTGTTGTGAAATTTGTGGAATATCTTCAACTCATTCTGAA CCATTTTCATTGTTACAATTACCAATTATTAAAAATCTTTCATTTTTTAAAAAAGTTAAC TTTAAAAATTATTCTGAATTAAAAGAATTAAAATATATAACAATTTATGATTGTTTAATT GGTTATTTATACTCTTTTCAAACATGTGTTAATTGTAATCATACACAAATTCATAATAAA GAATTCGTTGTAACACCTCCAATTCTTATTATTCAAATTCTTCGATTTGAACAACATTCA AATAACACACAAAAAGATCAAACTACAATTCTTTTCCCTTTAAATGATTTTGTTATTGGA GTAACAAAATATCAATTATATGCAACTATTGATCATACAGGTTCAATTAATCATGGTCAT TTTACTGCTAATTGTAAAATAAATAATTTATGGTATCATTTTGACGATGAAACAGTAAAA CCTCTTAATAAGATAGATATTGTTTCAAAAAAGTCATATATATTGTTTTATGAAAGAATT TAA
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  • Fasta :-

    MSFLTLFNTSKIKGTNGLYNLGNTCYMNAVIQCIAHTKQFLEYSLQYQLKVYINENNTKC SLIENVTESLIKTIQTLYTRKESIYPQYFFTTFGIYNQQFSDKKQKDAAEFLLLLLDVMD NDLRGTSIIQPPPIIHNEVYYKDYIEYIKNNKSIITQMTTGIVVSNFCCEICGISSTHSE PFSLLQLPIIKNLSFFKKVNFKNYSELKELKYITIYDCLIGYLYSFQTCVNCNHTQIHNK EFVVTPPILIIQILRFEQHSNNTQKDQTTILFPLNDFVIGVTKYQLYATIDHTGSINHGH FTANCKINNLWYHFDDETVKPLNKIDIVSKKSYILFYERI

  • title: Active Site
  • coordinates: N20,C25,H300,D316
No Results
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EHI_137730      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India