EHI_137970 | proteasome subunit beta Type 4 precursor, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_137970OTHER0.9997810.0001810.000038
No Results

  • Fasta :-

    >EHI_137970 MNKLIDVPIQQPAEVVLGTASVLGIKYEGGVLIAADTLGSYGSMALFKDLERVIKLGKYT IIAGSGEYSDFIELNETLQKKVNGDECCEGKENGYKPSELYSYAQRILYKHRCDQKPLFV TLIVGGVKKDEIFLGQTDMYGTSFTENYVASGIGAHMAMPLLRKEWKDHMSREEAEHLIE RCMKILYLNHCWAGNQYLLGVVDSEGSDIIGPITIDTTGKWDIIA
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_137970.fa Sequence name : EHI_137970 Sequence length : 225 VALUES OF COMPUTED PARAMETERS Coef20 : 3.443 CoefTot : -0.125 ChDiff : -8 ZoneTo : 5 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.206 1.312 0.131 0.554 MesoH : -0.530 0.472 -0.320 0.284 MuHd_075 : 7.060 6.196 3.104 2.066 MuHd_095 : 37.590 23.605 10.710 7.173 MuHd_100 : 31.795 17.403 8.800 5.856 MuHd_105 : 21.644 8.153 5.602 3.933 Hmax_075 : 3.967 12.483 0.642 4.970 Hmax_095 : 14.600 15.700 2.520 5.880 Hmax_100 : 14.400 16.100 2.618 5.880 Hmax_105 : 7.467 14.350 1.102 5.063 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9080 0.0920 DFMC : 0.9295 0.0705
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 225 EHI_137970 MNKLIDVPIQQPAEVVLGTASVLGIKYEGGVLIAADTLGSYGSMALFKDLERVIKLGKYTIIAGSGEYSDFIELNETLQK 80 KVNGDECCEGKENGYKPSELYSYAQRILYKHRCDQKPLFVTLIVGGVKKDEIFLGQTDMYGTSFTENYVASGIGAHMAMP 160 LLRKEWKDHMSREEAEHLIERCMKILYLNHCWAGNQYLLGVVDSEGSDIIGPITIDTTGKWDIIA 240 ................................................................................ 80 ................................................................................ 160 ................................................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_137970 3 ----MNK|LI 0.066 . EHI_137970 26 ASVLGIK|YE 0.068 . EHI_137970 48 GSMALFK|DL 0.106 . EHI_137970 52 LFKDLER|VI 0.072 . EHI_137970 55 DLERVIK|LG 0.088 . EHI_137970 58 RVIKLGK|YT 0.075 . EHI_137970 80 LNETLQK|KV 0.073 . EHI_137970 81 NETLQKK|VN 0.100 . EHI_137970 91 DECCEGK|EN 0.069 . EHI_137970 96 GKENGYK|PS 0.062 . EHI_137970 106 LYSYAQR|IL 0.112 . EHI_137970 110 AQRILYK|HR 0.071 . EHI_137970 112 RILYKHR|CD 0.091 . EHI_137970 116 KHRCDQK|PL 0.068 . EHI_137970 128 LIVGGVK|KD 0.063 . EHI_137970 129 IVGGVKK|DE 0.114 . EHI_137970 163 MAMPLLR|KE 0.087 . EHI_137970 164 AMPLLRK|EW 0.074 . EHI_137970 167 LLRKEWK|DH 0.083 . EHI_137970 172 WKDHMSR|EE 0.073 . EHI_137970 181 AEHLIER|CM 0.073 . EHI_137970 184 LIERCMK|IL 0.122 . EHI_137970 220 TIDTTGK|WD 0.068 . ____________________________^_________________

  • Fasta :-

    >EHI_137970 ATGAATAAATTAATTGATGTTCCTATTCAACAACCAGCTGAAGTTGTATTAGGTACAGCT TCTGTTCTTGGTATTAAATATGAAGGTGGTGTTCTTATTGCCGCAGATACACTTGGATCA TATGGGTCTATGGCATTATTCAAAGATTTAGAACGAGTCATAAAATTAGGGAAATACACA ATAATTGCTGGTTCAGGTGAATATTCTGATTTCATTGAATTAAATGAAACACTACAAAAG AAAGTCAATGGTGATGAATGTTGTGAAGGTAAAGAAAATGGATATAAACCAAGTGAATTA TATAGTTATGCTCAACGTATTTTATACAAACATCGATGTGATCAAAAACCATTATTTGTT ACATTGATTGTTGGAGGAGTTAAAAAAGATGAAATTTTCCTTGGACAAACTGATATGTAT GGTACATCATTTACAGAAAATTATGTTGCTAGTGGTATAGGTGCTCATATGGCTATGCCA CTATTACGAAAAGAATGGAAAGATCATATGTCTCGAGAAGAAGCTGAACATCTAATTGAG AGATGTATGAAAATTCTTTATTTAAATCATTGTTGGGCAGGAAATCAATATCTTTTAGGT GTAGTAGATTCAGAAGGGTCAGATATTATTGGACCAATTACTATAGATACAACAGGTAAA TGGGATATAATTGCTTAATTTCTTTCTTTTAAATAATTTGATATTTATAACAAAAATAAA TCAAATTAAACAAAATCATAATTTTTTT
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  • Fasta :-

    MNKLIDVPIQQPAEVVLGTASVLGIKYEGGVLIAADTLGSYGSMALFKDLERVIKLGKYT IIAGSGEYSDFIELNETLQKKVNGDECCEGKENGYKPSELYSYAQRILYKHRCDQKPLFV TLIVGGVKKDEIFLGQTDMYGTSFTENYVASGIGAHMAMPLLRKEWKDHMSREEAEHLIE RCMKILYLNHCWAGNQYLLGVVDSEGSDIIGPITIDTTGKWDIIA

  • title: active site
  • coordinates: T19,D36,L38,R52,I153,H190,A193,G194
No Results
No Results
IDSitePeptideScoreMethod
EHI_137970171 SKDHMSREEA0.994unsp

EHI_137970      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India