EHI_140500 | ubiquitin carboxyl-terminal hydrolase, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_140500OTHER0.9999850.0000080.000007
No Results

  • Fasta :-

    >EHI_140500 MENEKFNWNTIESDPGVFNEMVKNLGCDDIQFKEIFSFDDSATFERIKPIKGFILLFEYN KQTINYIRNEYSFIETNEYPDIFFAEQVVQNACATQAILSTLMNIPNINLGPTLQQFKNQ TLPLNPHERGLAIGNNEIIRKAHNDFAQPSEALENKISEKLKGVEGRAYHFISIIPYNGI LLLLDGLSEGPIIIGGADENWPITGMKPFFEGLINAMQGSLEFTLLAVVQDQIKKYQELY ENALAEKKEYQIELYKDIIDEEKKIKEQQHKENKRRKHDYMPLALNLILFLGKRHKLEQE IEKQINEITKK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_140500.fa Sequence name : EHI_140500 Sequence length : 311 VALUES OF COMPUTED PARAMETERS Coef20 : 2.905 CoefTot : 0.000 ChDiff : -11 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.241 1.665 0.147 0.693 MesoH : -0.139 0.543 -0.282 0.376 MuHd_075 : 16.025 11.684 5.130 3.664 MuHd_095 : 4.844 6.028 2.270 1.464 MuHd_100 : 7.331 7.169 3.134 2.109 MuHd_105 : 9.446 9.114 3.865 2.461 Hmax_075 : 2.800 3.500 -2.329 2.240 Hmax_095 : -6.388 -1.925 -4.365 1.970 Hmax_100 : -1.100 0.300 -3.324 2.690 Hmax_105 : 5.017 2.900 -1.029 2.065 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9803 0.0197 DFMC : 0.9836 0.0164
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 311 EHI_140500 MENEKFNWNTIESDPGVFNEMVKNLGCDDIQFKEIFSFDDSATFERIKPIKGFILLFEYNKQTINYIRNEYSFIETNEYP 80 DIFFAEQVVQNACATQAILSTLMNIPNINLGPTLQQFKNQTLPLNPHERGLAIGNNEIIRKAHNDFAQPSEALENKISEK 160 LKGVEGRAYHFISIIPYNGILLLLDGLSEGPIIIGGADENWPITGMKPFFEGLINAMQGSLEFTLLAVVQDQIKKYQELY 240 ENALAEKKEYQIELYKDIIDEEKKIKEQQHKENKRRKHDYMPLALNLILFLGKRHKLEQEIEKQINEITKK 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ....................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_140500 5 --MENEK|FN 0.062 . EHI_140500 23 VFNEMVK|NL 0.068 . EHI_140500 33 CDDIQFK|EI 0.064 . EHI_140500 46 DSATFER|IK 0.090 . EHI_140500 48 ATFERIK|PI 0.062 . EHI_140500 51 ERIKPIK|GF 0.070 . EHI_140500 61 LLFEYNK|QT 0.068 . EHI_140500 68 QTINYIR|NE 0.082 . EHI_140500 118 PTLQQFK|NQ 0.053 . EHI_140500 129 PLNPHER|GL 0.131 . EHI_140500 140 GNNEIIR|KA 0.124 . EHI_140500 141 NNEIIRK|AH 0.074 . EHI_140500 156 SEALENK|IS 0.069 . EHI_140500 160 ENKISEK|LK 0.074 . EHI_140500 162 KISEKLK|GV 0.124 . EHI_140500 167 LKGVEGR|AY 0.118 . EHI_140500 207 WPITGMK|PF 0.075 . EHI_140500 234 VVQDQIK|KY 0.058 . EHI_140500 235 VQDQIKK|YQ 0.099 . EHI_140500 247 ENALAEK|KE 0.064 . EHI_140500 248 NALAEKK|EY 0.080 . EHI_140500 256 YQIELYK|DI 0.079 . EHI_140500 263 DIIDEEK|KI 0.064 . EHI_140500 264 IIDEEKK|IK 0.100 . EHI_140500 266 DEEKKIK|EQ 0.066 . EHI_140500 271 IKEQQHK|EN 0.065 . EHI_140500 274 QQHKENK|RR 0.056 . EHI_140500 275 QHKENKR|RK 0.185 . EHI_140500 276 HKENKRR|KH 0.165 . EHI_140500 277 KENKRRK|HD 0.096 . EHI_140500 293 LILFLGK|RH 0.055 . EHI_140500 294 ILFLGKR|HK 0.151 . EHI_140500 296 FLGKRHK|LE 0.069 . EHI_140500 303 LEQEIEK|QI 0.071 . EHI_140500 310 QINEITK|K- 0.070 . EHI_140500 311 INEITKK|-- 0.106 . ____________________________^_________________

  • Fasta :-

    >EHI_140500 ATGGAAAATGAAAAATTTAATTGGAATACTATTGAATCTGACCCTGGAGTATTTAATGAA ATGGTAAAAAATTTAGGATGTGATGATATTCAATTTAAAGAAATATTTTCTTTTGATGAT TCTGCTACATTTGAACGAATCAAACCAATAAAAGGATTTATTTTATTATTTGAATATAAT AAACAAACAATAAATTATATAAGAAATGAATATAGCTTTATTGAAACAAATGAATATCCT GATATTTTCTTTGCTGAACAAGTTGTTCAAAACGCTTGTGCTACTCAAGCAATATTATCT ACATTAATGAATATCCCAAATATTAATCTAGGACCAACTTTACAACAATTTAAAAATCAA ACACTACCATTAAATCCTCATGAACGTGGGTTGGCTATTGGAAATAATGAAATAATTAGA AAAGCCCATAATGATTTTGCTCAGCCATCTGAAGCACTTGAAAATAAAATATCAGAAAAA TTAAAAGGAGTGGAAGGACGTGCATATCACTTTATTAGTATTATTCCATATAATGGTATT TTATTATTACTTGATGGACTTAGTGAAGGACCAATTATTATTGGAGGTGCTGATGAGAAT TGGCCTATTACAGGAATGAAACCATTTTTTGAAGGACTTATTAATGCTATGCAAGGAAGT CTTGAATTTACTTTATTAGCAGTGGTTCAAGACCAAATTAAGAAATATCAAGAATTATAT GAAAATGCTCTTGCTGAGAAAAAAGAATATCAAATAGAATTGTATAAAGATATTATTGAT GAAGAAAAAAAAATTAAAGAACAACAACACAAAGAAAATAAAAGAAGAAAACATGACTAT ATGCCATTAGCATTAAATTTAATTCTATTTCTTGGAAAACGTCATAAATTAGAACAAGAA ATAGAAAAACAAATAAATGAAATAACAAAGAAGTAATTGATTATTATAAA
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  • Fasta :-

    MENEKFNWNTIESDPGVFNEMVKNLGCDDIQFKEIFSFDDSATFERIKPIKGFILLFEYN KQTINYIRNEYSFIETNEYPDIFFAEQVVQNACATQAILSTLMNIPNINLGPTLQQFKNQ TLPLNPHERGLAIGNNEIIRKAHNDFAQPSEALENKISEKLKGVEGRAYHFISIIPYNGI LLLLDGLSEGPIIIGGADENWPITGMKPFFEGLINAMQGSLEFTLLAVVQDQIKKYQELY ENALAEKKEYQIELYKDIIDEEKKIKEQQHKENKRRKHDYMPLALNLILFLGKRHKLEQE IEKQINEITKK

    No Results
  • title: catalytic site
  • coordinates: Q87,C93,H170,D185
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EHI_140500      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India