EHI_148040 | proteasome subunit beta type 7-B precursor, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_148040OTHER0.9997160.0002390.000045
No Results

  • Fasta :-

    >EHI_148040 MNMTNDPLPIATSYVNDKTKFLKTGTTICGLVCDKGQTVVLACDSRATVGPIVADKACMK LHKLAPNIYCGGAGTAADLTHATNFIATKLGVHRFTIGQMPRVDTAVTMLKRHLFPYGGH IGAYLVVGGYDYTGAHLWGVYADGSTSQHNYYSLGSGSIAATTMLDDQWNENLTREEGVK LATQAILAGIFNDMGSGGRVNVCVIDKNGVEEKLNIEHPNDRKFKNPDFKGFPKKLEILK KTVIPIEHEEEDFKDQKQMELE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_148040.fa Sequence name : EHI_148040 Sequence length : 262 VALUES OF COMPUTED PARAMETERS Coef20 : 3.460 CoefTot : -0.268 ChDiff : -2 ZoneTo : 5 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.112 1.229 0.183 0.619 MesoH : -0.069 0.454 -0.220 0.266 MuHd_075 : 11.275 8.652 3.833 2.597 MuHd_095 : 29.436 17.445 7.715 4.331 MuHd_100 : 23.657 15.811 5.880 3.796 MuHd_105 : 13.681 11.479 3.685 2.922 Hmax_075 : 3.967 6.300 -1.163 3.197 Hmax_095 : 12.600 8.700 1.130 3.480 Hmax_100 : 8.000 6.800 -0.407 2.580 Hmax_105 : 1.663 3.675 -1.849 2.090 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8869 0.1131 DFMC : 0.9233 0.0767
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 262 EHI_148040 MNMTNDPLPIATSYVNDKTKFLKTGTTICGLVCDKGQTVVLACDSRATVGPIVADKACMKLHKLAPNIYCGGAGTAADLT 80 HATNFIATKLGVHRFTIGQMPRVDTAVTMLKRHLFPYGGHIGAYLVVGGYDYTGAHLWGVYADGSTSQHNYYSLGSGSIA 160 ATTMLDDQWNENLTREEGVKLATQAILAGIFNDMGSGGRVNVCVIDKNGVEEKLNIEHPNDRKFKNPDFKGFPKKLEILK 240 KTVIPIEHEEEDFKDQKQMELE 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ...................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_148040 18 TSYVNDK|TK 0.069 . EHI_148040 20 YVNDKTK|FL 0.089 . EHI_148040 23 DKTKFLK|TG 0.062 . EHI_148040 35 CGLVCDK|GQ 0.060 . EHI_148040 46 VLACDSR|AT 0.077 . EHI_148040 56 GPIVADK|AC 0.065 . EHI_148040 60 ADKACMK|LH 0.058 . EHI_148040 63 ACMKLHK|LA 0.070 . EHI_148040 89 TNFIATK|LG 0.061 . EHI_148040 94 TKLGVHR|FT 0.134 . EHI_148040 102 TIGQMPR|VD 0.098 . EHI_148040 111 TAVTMLK|RH 0.053 . EHI_148040 112 AVTMLKR|HL 0.186 . EHI_148040 175 WNENLTR|EE 0.110 . EHI_148040 180 TREEGVK|LA 0.079 . EHI_148040 199 DMGSGGR|VN 0.066 . EHI_148040 207 NVCVIDK|NG 0.054 . EHI_148040 213 KNGVEEK|LN 0.066 . EHI_148040 222 IEHPNDR|KF 0.071 . EHI_148040 223 EHPNDRK|FK 0.080 . EHI_148040 225 PNDRKFK|NP 0.154 . EHI_148040 230 FKNPDFK|GF 0.083 . EHI_148040 234 DFKGFPK|KL 0.073 . EHI_148040 235 FKGFPKK|LE 0.092 . EHI_148040 240 KKLEILK|KT 0.059 . EHI_148040 241 KLEILKK|TV 0.260 . EHI_148040 254 HEEEDFK|DQ 0.071 . EHI_148040 257 EDFKDQK|QM 0.062 . ____________________________^_________________

  • Fasta :-

    >EHI_148040 ATGAATATGACTAATGACCCTTTACCAATTGCAACTTCTTATGTTAATGACAAAACTAAG TTTTTAAAAACAGGTACAACTATTTGTGGATTAGTTTGCGACAAAGGACAAACCGTTGTA TTAGCGTGTGATTCACGTGCAACTGTTGGACCAATTGTAGCAGATAAGGCTTGCATGAAA TTACATAAATTAGCACCAAATATTTATTGTGGGGGAGCAGGTACTGCTGCTGATTTAACT CATGCAACAAACTTCATTGCCACAAAACTTGGGGTTCATCGATTTACTATTGGACAAATG CCAAGAGTTGATACTGCTGTTACTATGCTTAAAAGACATTTGTTTCCTTATGGAGGACAT ATTGGAGCCTATCTTGTTGTTGGAGGATATGATTATACTGGAGCTCATCTTTGGGGAGTT TATGCAGATGGTTCAACTAGTCAACATAACTACTATTCACTTGGAAGTGGTAGTATTGCT GCAACGACAATGTTAGATGATCAATGGAATGAAAACTTAACGAGAGAAGAAGGTGTTAAA TTAGCAACACAGGCTATCCTTGCAGGTATTTTTAATGATATGGGTTCTGGAGGAAGAGTC AATGTATGTGTAATAGATAAGAATGGAGTAGAAGAAAAATTAAATATTGAACATCCAAAT GACAGAAAATTCAAGAATCCAGATTTCAAAGGATTTCCTAAGAAGCTTGAAATTCTCAAG AAAACAGTTATTCCTATTGAACATGAAGAAGAAGACTTTAAAGATCAGAAACAAATGGAG TTAGAATAA
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  • Fasta :-

    MNMTNDPLPIATSYVNDKTKFLKTGTTICGLVCDKGQTVVLACDSRATVGPIVADKACMK LHKLAPNIYCGGAGTAADLTHATNFIATKLGVHRFTIGQMPRVDTAVTMLKRHLFPYGGH IGAYLVVGGYDYTGAHLWGVYADGSTSQHNYYSLGSGSIAATTMLDDQWNENLTREEGVK LATQAILAGIFNDMGSGGRVNVCVIDKNGVEEKLNIEHPNDRKFKNPDFKGFPKKLEILK KTVIPIEHEEEDFKDQKQMELE

  • title: active site
  • coordinates: T26,D44,R46,K60,S156,D193,S196,G197
No Results
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EHI_148040      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India