EHI_151400 | cysteine proteinase, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_151400SP0.0165910.9832220.000187CS pos: 13-14. ANA-IT. Pr: 0.4674
No Results

  • Fasta :-

    >EHI_151400 MFAVILLGLCANAITFDQWQSKYKFKYSPVERLRRKAIFISNFNYVKEFNKNHGFELSVE GPHAALTSEEYQALLNKQIIGNENKGIEAVNLKSNKQVPASVDWRAEGKVTPVRDQGGCS SCYSFGAVAAIESRLLISGTTRYTAQTLDLSEQQIVDCAVLAKGCNGGTLQASYNYVKSN GLMEEKDNPYTGKDGKCLYDKTKIKVSIEGLRTADISDAALTAAIAEAPVGVCIDASQIS FQLYKSGVYDEPKCKKIMNHCVAAVGYGSQDGQDYYIVKNSWGSFWGMDGYILMSRNKNN QCGICTGISFPVGVKEI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_151400.fa Sequence name : EHI_151400 Sequence length : 317 VALUES OF COMPUTED PARAMETERS Coef20 : 4.295 CoefTot : -0.929 ChDiff : 3 ZoneTo : 47 KR : 8 DE : 2 CleavSite : 36 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.353 1.876 0.230 0.655 MesoH : -0.528 0.234 -0.283 0.196 MuHd_075 : 36.642 18.586 9.037 6.454 MuHd_095 : 27.796 18.263 7.761 5.990 MuHd_100 : 24.363 14.741 6.019 5.920 MuHd_105 : 30.003 20.698 7.181 7.229 Hmax_075 : -7.000 9.567 -0.270 3.480 Hmax_095 : 4.725 2.100 0.089 0.840 Hmax_100 : 1.700 -0.900 0.024 3.230 Hmax_105 : 10.500 15.867 1.191 4.900 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8697 0.1303 DFMC : 0.8570 0.1430
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 317 EHI_151400 MFAVILLGLCANAITFDQWQSKYKFKYSPVERLRRKAIFISNFNYVKEFNKNHGFELSVEGPHAALTSEEYQALLNKQII 80 GNENKGIEAVNLKSNKQVPASVDWRAEGKVTPVRDQGGCSSCYSFGAVAAIESRLLISGTTRYTAQTLDLSEQQIVDCAV 160 LAKGCNGGTLQASYNYVKSNGLMEEKDNPYTGKDGKCLYDKTKIKVSIEGLRTADISDAALTAAIAEAPVGVCIDASQIS 240 FQLYKSGVYDEPKCKKIMNHCVAAVGYGSQDGQDYYIVKNSWGSFWGMDGYILMSRNKNNQCGICTGISFPVGVKEI 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................................................................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_151400 22 FDQWQSK|YK 0.076 . EHI_151400 24 QWQSKYK|FK 0.070 . EHI_151400 26 QSKYKFK|YS 0.077 . EHI_151400 32 KYSPVER|LR 0.100 . EHI_151400 34 SPVERLR|RK 0.080 . EHI_151400 35 PVERLRR|KA 0.298 . EHI_151400 36 VERLRRK|AI 0.098 . EHI_151400 47 SNFNYVK|EF 0.061 . EHI_151400 51 YVKEFNK|NH 0.065 . EHI_151400 77 YQALLNK|QI 0.070 . EHI_151400 85 IIGNENK|GI 0.078 . EHI_151400 93 IEAVNLK|SN 0.091 . EHI_151400 96 VNLKSNK|QV 0.086 . EHI_151400 105 PASVDWR|AE 0.145 . EHI_151400 109 DWRAEGK|VT 0.062 . EHI_151400 114 GKVTPVR|DQ 0.110 . EHI_151400 134 VAAIESR|LL 0.082 . EHI_151400 142 LISGTTR|YT 0.126 . EHI_151400 163 DCAVLAK|GC 0.076 . EHI_151400 178 ASYNYVK|SN 0.085 . EHI_151400 186 NGLMEEK|DN 0.062 . EHI_151400 193 DNPYTGK|DG 0.066 . EHI_151400 196 YTGKDGK|CL 0.070 . EHI_151400 201 GKCLYDK|TK 0.060 . EHI_151400 203 CLYDKTK|IK 0.068 . EHI_151400 205 YDKTKIK|VS 0.072 . EHI_151400 212 VSIEGLR|TA 0.092 . EHI_151400 245 ISFQLYK|SG 0.072 . EHI_151400 253 GVYDEPK|CK 0.064 . EHI_151400 255 YDEPKCK|KI 0.063 . EHI_151400 256 DEPKCKK|IM 0.087 . EHI_151400 279 QDYYIVK|NS 0.068 . EHI_151400 296 GYILMSR|NK 0.070 . EHI_151400 298 ILMSRNK|NN 0.066 . EHI_151400 315 SFPVGVK|EI 0.059 . ____________________________^_________________

  • Fasta :-

    >EHI_151400 ATGTTTGCAGTTATTCTGTTAGGACTTTGTGCAAATGCAATCACATTTGATCAATGGCAA TCTAAATACAAATTTAAATACTCTCCTGTGGAAAGACTAAGAAGAAAAGCAATATTTATA AGTAATTTCAACTATGTTAAAGAATTTAATAAAAACCATGGTTTTGAACTTTCTGTTGAA GGTCCACATGCTGCTTTAACAAGTGAAGAGTACCAAGCACTTTTAAATAAACAAATTATT GGAAATGAAAATAAAGGTATTGAAGCTGTCAATTTAAAAAGTAATAAACAAGTTCCAGCC TCTGTTGATTGGAGAGCTGAAGGAAAGGTTACTCCAGTTAGAGACCAAGGAGGTTGTAGT TCATGTTATTCATTTGGTGCTGTTGCAGCAATTGAATCAAGATTATTGATAAGTGGAACA ACTCGATATACAGCACAAACCCTTGACCTTTCTGAACAACAAATAGTTGACTGTGCTGTT CTTGCTAAGGGATGTAATGGAGGAACTCTTCAGGCATCTTATAATTATGTAAAGTCAAAT GGACTTATGGAAGAAAAGGATAATCCTTATACTGGCAAAGATGGAAAATGTTTATATGAC AAGACAAAAATAAAAGTTTCTATTGAAGGACTTAGAACTGCTGATATTAGTGATGCTGCT CTCACTGCTGCTATTGCTGAAGCTCCTGTTGGTGTTTGTATTGATGCAAGTCAAATATCT TTCCAATTATATAAATCAGGAGTTTATGATGAACCAAAATGTAAGAAAATAATGAACCAT TGTGTTGCTGCTGTTGGATATGGATCTCAAGATGGTCAAGATTATTACATTGTAAAAAAT TCATGGGGAAGTTTTTGGGGAATGGATGGTTATATTTTAATGTCCAGAAATAAGAATAAT CAATGTGGTATTTGCACAGGAATTTCATTCCCAGTTGGGGTAAAAGAGATTTAA
  • Download Fasta

  • Fasta :-

    MFAVILLGLCANAITFDQWQSKYKFKYSPVERLRRKAIFISNFNYVKEFNKNHGFELSVE GPHAALTSEEYQALLNKQIIGNENKGIEAVNLKSNKQVPASVDWRAEGKVTPVRDQGGCS SCYSFGAVAAIESRLLISGTTRYTAQTLDLSEQQIVDCAVLAKGCNGGTLQASYNYVKSN GLMEEKDNPYTGKDGKCLYDKTKIKVSIEGLRTADISDAALTAAIAEAPVGVCIDASQIS FQLYKSGVYDEPKCKKIMNHCVAAVGYGSQDGQDYYIVKNSWGSFWGMDGYILMSRNKNN QCGICTGISFPVGVKEI

    No Results
  • title: active site
  • coordinates: Q116,C122,H260,N280
No Results
No Results
IDSitePeptideScoreMethod
EHI_151400207 SKIKVSIEGL0.994unsp

EHI_151400      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India