EHI_151440 | cysteine proteinase, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_151440SP0.0013730.9985230.000104CS pos: 15-16. SNA-IS. Pr: 0.7685
No Results

  • Fasta :-

    >EHI_151440 MFGLLFVTLISLSNAISFDKWMAKNNQKFKGIELLRRRAIFNMNSMFVAKFNQQHNFQLS VDGPYAAMTNAEYNTLLKARTVKNVNAPVRKAIKGDIPTAIDWRAEGKVTPIRDQAQCGS CYSFGSLAAIESRLLIGGSQTYNADNLDLSEQQIVDCSNKNNGCNGGSILYVFAYTKRNG VMQEKDYPYTATNGTCQYDADKIIVKNAGQVIVEQRNEVALVEAIAEGPVAVAIDAGQAS FQLYKSGVYDEPKCKKVILNHAVCAVGYGSQDGQDYYIVRNSWGTSWGMDGYILMSRNKN NQCGIANDAIYPTGVTEVKK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_151440.fa Sequence name : EHI_151440 Sequence length : 320 VALUES OF COMPUTED PARAMETERS Coef20 : 4.492 CoefTot : -0.950 ChDiff : 5 ZoneTo : 61 KR : 8 DE : 2 CleavSite : 38 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.876 1.859 0.261 0.684 MesoH : -0.798 0.245 -0.394 0.195 MuHd_075 : 33.237 19.469 8.751 7.039 MuHd_095 : 33.307 19.299 8.368 7.199 MuHd_100 : 29.236 17.184 7.592 5.892 MuHd_105 : 33.997 19.748 8.479 7.159 Hmax_075 : 15.167 14.933 -0.099 4.573 Hmax_095 : 12.425 12.600 0.705 5.380 Hmax_100 : 10.500 6.800 0.305 3.080 Hmax_105 : 1.300 6.100 -3.010 2.870 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5101 0.4899 DFMC : 0.3234 0.6766 This protein is probably imported in mitochondria. f(Ser) = 0.0820 f(Arg) = 0.0492 CMi = 0.59032 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 320 EHI_151440 MFGLLFVTLISLSNAISFDKWMAKNNQKFKGIELLRRRAIFNMNSMFVAKFNQQHNFQLSVDGPYAAMTNAEYNTLLKAR 80 TVKNVNAPVRKAIKGDIPTAIDWRAEGKVTPIRDQAQCGSCYSFGSLAAIESRLLIGGSQTYNADNLDLSEQQIVDCSNK 160 NNGCNGGSILYVFAYTKRNGVMQEKDYPYTATNGTCQYDADKIIVKNAGQVIVEQRNEVALVEAIAEGPVAVAIDAGQAS 240 FQLYKSGVYDEPKCKKVILNHAVCAVGYGSQDGQDYYIVRNSWGTSWGMDGYILMSRNKNNQCGIANDAIYPTGVTEVKK 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_151440 20 NAISFDK|WM 0.060 . EHI_151440 24 FDKWMAK|NN 0.067 . EHI_151440 28 MAKNNQK|FK 0.080 . EHI_151440 30 KNNQKFK|GI 0.090 . EHI_151440 36 KGIELLR|RR 0.067 . EHI_151440 37 GIELLRR|RA 0.127 . EHI_151440 38 IELLRRR|AI 0.132 . EHI_151440 50 NSMFVAK|FN 0.097 . EHI_151440 78 EYNTLLK|AR 0.057 . EHI_151440 80 NTLLKAR|TV 0.124 . EHI_151440 83 LKARTVK|NV 0.188 . EHI_151440 90 NVNAPVR|KA 0.116 . EHI_151440 91 VNAPVRK|AI 0.115 . EHI_151440 94 PVRKAIK|GD 0.061 . EHI_151440 104 PTAIDWR|AE 0.108 . EHI_151440 108 DWRAEGK|VT 0.061 . EHI_151440 113 GKVTPIR|DQ 0.114 . EHI_151440 133 LAAIESR|LL 0.096 . EHI_151440 160 IVDCSNK|NN 0.069 . EHI_151440 177 YVFAYTK|RN 0.060 . EHI_151440 178 VFAYTKR|NG 0.163 . EHI_151440 185 NGVMQEK|DY 0.063 . EHI_151440 202 CQYDADK|II 0.062 . EHI_151440 206 ADKIIVK|NA 0.084 . EHI_151440 216 QVIVEQR|NE 0.080 . EHI_151440 245 ASFQLYK|SG 0.070 . EHI_151440 253 GVYDEPK|CK 0.070 . EHI_151440 255 YDEPKCK|KV 0.066 . EHI_151440 256 DEPKCKK|VI 0.076 . EHI_151440 280 QDYYIVR|NS 0.081 . EHI_151440 297 GYILMSR|NK 0.070 . EHI_151440 299 ILMSRNK|NN 0.062 . EHI_151440 319 TGVTEVK|K- 0.063 . EHI_151440 320 GVTEVKK|-- 0.103 . ____________________________^_________________

  • Fasta :-

    >EHI_151440 ATGTTTGGTTTACTCTTTGTTACTCTCATTTCATTGAGCAATGCTATTAGCTTTGATAAA TGGATGGCAAAAAATAATCAAAAATTCAAAGGAATTGAATTATTAAGAAGAAGAGCTATC TTTAATATGAACTCTATGTTTGTTGCCAAATTTAACCAACAACATAATTTCCAATTATCT GTTGATGGTCCATATGCTGCCATGACTAATGCTGAATATAATACTTTATTAAAGGCTAGA ACTGTTAAGAATGTTAATGCCCCAGTTAGAAAAGCTATTAAAGGAGATATTCCAACAGCT ATTGATTGGAGAGCTGAAGGAAAAGTTACTCCAATTAGAGATCAAGCCCAATGTGGTTCA TGTTATTCATTTGGGTCTCTTGCTGCTATTGAATCAAGATTATTGATTGGTGGTTCTCAA ACTTATAATGCTGATAATCTTGACCTTTCTGAACAACAAATAGTTGACTGTAGTAACAAA AATAATGGATGTAATGGTGGCTCTATTTTATATGTCTTCGCTTACACAAAGAGAAATGGA GTAATGCAAGAAAAGGATTATCCATATACTGCAACAAATGGAACTTGTCAATATGATGCT GATAAAATTATTGTTAAGAATGCTGGACAAGTTATTGTTGAACAAAGAAATGAAGTTGCT TTAGTTGAAGCTATTGCTGAAGGACCAGTTGCTGTTGCTATTGATGCAGGTCAAGCATCT TTCCAATTATATAAATCAGGAGTTTATGATGAACCAAAATGTAAAAAGGTTATTCTTAAT CATGCTGTTTGTGCTGTTGGATATGGATCTCAAGATGGTCAAGATTATTACATTGTAAGA AATTCATGGGGAACTTCATGGGGAATGGATGGTTATATTTTAATGTCCAGAAATAAGAAT AATCAATGTGGTATTGCTAATGATGCAATTTATCCAACTGGTGTTACTGAAGTAAAGAAA TAA
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  • Fasta :-

    MFGLLFVTLISLSNAISFDKWMAKNNQKFKGIELLRRRAIFNMNSMFVAKFNQQHNFQLS VDGPYAAMTNAEYNTLLKARTVKNVNAPVRKAIKGDIPTAIDWRAEGKVTPIRDQAQCGS CYSFGSLAAIESRLLIGGSQTYNADNLDLSEQQIVDCSNKNNGCNGGSILYVFAYTKRNG VMQEKDYPYTATNGTCQYDADKIIVKNAGQVIVEQRNEVALVEAIAEGPVAVAIDAGQAS FQLYKSGVYDEPKCKKVILNHAVCAVGYGSQDGQDYYIVRNSWGTSWGMDGYILMSRNKN NQCGIANDAIYPTGVTEVKK

    No Results
  • title: active site
  • coordinates: Q115,C121,H261,N281
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EHI_151440      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India